RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 BTAF1O14981 1849 aa19.41■□□□□ 0.7
COMMD3-208ENST00000470045 NSD2O96028 1365 aa19.41■□□□□ 0.7
COMMD3-208ENST00000470045 NBPF6Q5VWK0 638 aa19.4■□□□□ 0.7
COMMD3-208ENST00000470045 NBPF4Q96M43 638 aa19.4■□□□□ 0.7
COMMD3-208ENST00000470045 KIF7Q2M1P5 1343 aa19.39■□□□□ 0.69
COMMD3-208ENST00000470045 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.69
COMMD3-208ENST00000470045 DOT1LQ8TEK3 1739 aa19.39■□□□□ 0.69
COMMD3-208ENST00000470045 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
COMMD3-208ENST00000470045 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
COMMD3-208ENST00000470045 WASHC2AQ641Q2 1341 aa19.37■□□□□ 0.69
COMMD3-208ENST00000470045 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
COMMD3-208ENST00000470045 POLKQ9UBT6 870 aa19.36■□□□□ 0.69
COMMD3-208ENST00000470045 KCNQ2O43526 872 aa19.35■□□□□ 0.69
COMMD3-208ENST00000470045 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
COMMD3-208ENST00000470045 USHBP1Q8N6Y0 703 aa19.34■□□□□ 0.69
COMMD3-208ENST00000470045 PROM2Q8N271 834 aa19.33■□□□□ 0.68
COMMD3-208ENST00000470045 PAPPAQ13219 1627 aa19.33■□□□□ 0.68
COMMD3-208ENST00000470045 KAT6BQ8WYB5 2073 aa19.32■□□□□ 0.68
COMMD3-208ENST00000470045 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
COMMD3-208ENST00000470045 ACSBG1Q96GR2 724 aa19.32■□□□□ 0.68
COMMD3-208ENST00000470045 NBPF14Q5TI25 921 aa19.31■□□□□ 0.68
COMMD3-208ENST00000470045 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
COMMD3-208ENST00000470045 RAPGEF4Q8WZA2 1011 aa19.31■□□□□ 0.68
COMMD3-208ENST00000470045 CASZ1Q86V15 1759 aa19.31■□□□□ 0.68
COMMD3-208ENST00000470045 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
COMMD3-208ENST00000470045 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
COMMD3-208ENST00000470045 LY75O60449 1722 aa19.3■□□□□ 0.68
COMMD3-208ENST00000470045 TATP17735 454 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-208ENST00000470045 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
COMMD3-208ENST00000470045 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
COMMD3-208ENST00000470045 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
COMMD3-208ENST00000470045 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
COMMD3-208ENST00000470045 TNNT2P45379 298 aaPredicted RBP19.28■□□□□ 0.68
COMMD3-208ENST00000470045 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
COMMD3-208ENST00000470045 EYA1Q99502 592 aa19.27■□□□□ 0.68
COMMD3-208ENST00000470045 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.68
COMMD3-208ENST00000470045 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
COMMD3-208ENST00000470045 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
COMMD3-208ENST00000470045 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
COMMD3-208ENST00000470045 EIF4A2Q14240 407 aaKnown RBP19.26■□□□□ 0.67
COMMD3-208ENST00000470045 MORC1Q86VD1 984 aa19.26■□□□□ 0.67
COMMD3-208ENST00000470045 ITGB4P16144 1822 aa19.25■□□□□ 0.67
COMMD3-208ENST00000470045 IGSF1Q8N6C5 1336 aa19.25■□□□□ 0.67
COMMD3-208ENST00000470045 QSER1Q2KHR3 1735 aa19.23■□□□□ 0.67
COMMD3-208ENST00000470045 CYP27B1O15528 508 aa19.23■□□□□ 0.67
COMMD3-208ENST00000470045 PRIM1P49642 420 aaKnown RBP19.23■□□□□ 0.67
COMMD3-208ENST00000470045 NPC1L1Q9UHC9 1359 aa19.22■□□□□ 0.67
COMMD3-208ENST00000470045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.67
COMMD3-208ENST00000470045 TUBGCP6Q96RT7 1819 aa19.19■□□□□ 0.66
COMMD3-208ENST00000470045 NKX1-1Q15270 411 aaPredicted RBP19.19■□□□□ 0.66
COMMD3-208ENST00000470045 SLC15A2Q16348 729 aa19.19■□□□□ 0.66
COMMD3-208ENST00000470045 SYTL4Q96C24 671 aaPredicted RBP19.19■□□□□ 0.66
COMMD3-208ENST00000470045 LRRC4BQ9NT99 713 aa19.19■□□□□ 0.66
COMMD3-208ENST00000470045 SPG7Q9UQ90 795 aa19.19■□□□□ 0.66
COMMD3-208ENST00000470045 SLC27A3Q5K4L6 730 aa19.18■□□□□ 0.66
COMMD3-208ENST00000470045 STK32BQ9NY57 414 aa19.18■□□□□ 0.66
COMMD3-208ENST00000470045 KDRP35968 1356 aa19.17■□□□□ 0.66
COMMD3-208ENST00000470045 TAF1LQ8IZX4 1826 aa19.16■□□□□ 0.66
COMMD3-208ENST00000470045 C5P01031 1676 aa19.16■□□□□ 0.66
COMMD3-208ENST00000470045 PDGFDQ9GZP0 370 aaPredicted RBP19.15■□□□□ 0.66
COMMD3-208ENST00000470045 IL13P35225 146 aa19.14■□□□□ 0.65
COMMD3-208ENST00000470045 ZNF827Q17R98 1081 aa19.14■□□□□ 0.65
COMMD3-208ENST00000470045 SPON1Q9HCB6 807 aa19.14■□□□□ 0.65
COMMD3-208ENST00000470045 PHKG2P15735 406 aa19.13■□□□□ 0.65
COMMD3-208ENST00000470045 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
COMMD3-208ENST00000470045 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
COMMD3-208ENST00000470045 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
COMMD3-208ENST00000470045 COL24A1Q17RW2 1714 aa19.13■□□□□ 0.65
COMMD3-208ENST00000470045 MTHFSP49914 203 aa19.12■□□□□ 0.65
COMMD3-208ENST00000470045 IFNL2Q8IZJ0 200 aa19.12■□□□□ 0.65
COMMD3-208ENST00000470045 PALLDQ8WX93 1383 aa19.11■□□□□ 0.65
COMMD3-208ENST00000470045 AEBP1Q8IUX7 1158 aa19.11■□□□□ 0.65
COMMD3-208ENST00000470045 KCNQ4P56696 695 aa19.09■□□□□ 0.65
COMMD3-208ENST00000470045 POTEHQ6S545 545 aa19.09■□□□□ 0.65
COMMD3-208ENST00000470045 MPRIPQ6WCQ1 1025 aa19.09■□□□□ 0.65
COMMD3-208ENST00000470045 CCNL1Q9UK58 526 aaPredicted RBP19.09■□□□□ 0.65
COMMD3-208ENST00000470045 AMOTQ4VCS5 1084 aa19.08■□□□□ 0.64
COMMD3-208ENST00000470045 PIGBQ92521 554 aa19.08■□□□□ 0.64
COMMD3-208ENST00000470045 SCN11AQ9UI33 1791 aa19.08■□□□□ 0.64
COMMD3-208ENST00000470045 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.64
COMMD3-208ENST00000470045 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.64
COMMD3-208ENST00000470045 ZBTB7AO95365 584 aa19.07■□□□□ 0.64
COMMD3-208ENST00000470045 PTGER2P43116 358 aa19.07■□□□□ 0.64
COMMD3-208ENST00000470045 PLEKHO1Q53GL0 409 aaPredicted RBP19.07■□□□□ 0.64
COMMD3-208ENST00000470045 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
COMMD3-208ENST00000470045 C4BP0C0L5 1744 aa19.07■□□□□ 0.64
COMMD3-208ENST00000470045 VIRMAQ69YN4 1812 aaKnown RBP19.07■□□□□ 0.64
COMMD3-208ENST00000470045 PNPLA7Q6ZV29 1317 aa19.06■□□□□ 0.64
COMMD3-208ENST00000470045 SMARCC1Q92922 1105 aaPredicted RBP19.06■□□□□ 0.64
COMMD3-208ENST00000470045 MTFR1LQ9H019 292 aa19.06■□□□□ 0.64
COMMD3-208ENST00000470045 HSP90AB1P08238 724 aaKnown RBP19.05■□□□□ 0.64
COMMD3-208ENST00000470045 ZNF530Q6P9A1 599 aaPredicted RBP19.05■□□□□ 0.64
COMMD3-208ENST00000470045 SGIP1Q9BQI5 828 aa19.05■□□□□ 0.64
COMMD3-208ENST00000470045 TMOD3Q9NYL9 352 aa19.05■□□□□ 0.64
COMMD3-208ENST00000470045 UBR3Q6ZT12 1888 aa19.05■□□□□ 0.64
COMMD3-208ENST00000470045 ADAMTS7Q9UKP4 1686 aa19.05■□□□□ 0.64
COMMD3-208ENST00000470045 DCAF5Q96JK2 942 aa19.04■□□□□ 0.64
COMMD3-208ENST00000470045 ERVV-2B6SEH9 535 aa19.03■□□□□ 0.64
COMMD3-208ENST00000470045 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
COMMD3-208ENST00000470045 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms