RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
FAM228B-203ENST00000469867 FAM208AQ9UK61 1670 aaKnown RBP16■□□□□ 0.15
FAM228B-203ENST00000469867 NSD3Q9BZ95 1437 aa15.99■□□□□ 0.15
FAM228B-203ENST00000469867 BTAF1O14981 1849 aa15.99■□□□□ 0.15
FAM228B-203ENST00000469867 MEGF6O75095 1541 aa15.99■□□□□ 0.15
FAM228B-203ENST00000469867 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
FAM228B-203ENST00000469867 RTL1A6NKG5 1358 aa15.99■□□□□ 0.15
FAM228B-203ENST00000469867 PPM1GO15355 546 aaPredicted RBP15.99■□□□□ 0.15
FAM228B-203ENST00000469867 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
FAM228B-203ENST00000469867 LRRC4BQ9NT99 713 aa15.99■□□□□ 0.15
FAM228B-203ENST00000469867 MYOM1P52179 1685 aa15.98■□□□□ 0.15
FAM228B-203ENST00000469867 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
FAM228B-203ENST00000469867 KCNQ4P56696 695 aa15.97■□□□□ 0.15
FAM228B-203ENST00000469867 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
FAM228B-203ENST00000469867 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
FAM228B-203ENST00000469867 CASZ1Q86V15 1759 aa15.96■□□□□ 0.15
FAM228B-203ENST00000469867 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.15
FAM228B-203ENST00000469867 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.15
FAM228B-203ENST00000469867 FLT4P35916 1363 aa15.95■□□□□ 0.14
FAM228B-203ENST00000469867 INSRP06213 1382 aa15.95■□□□□ 0.14
FAM228B-203ENST00000469867 PTGER2P43116 358 aa15.94■□□□□ 0.14
FAM228B-203ENST00000469867 ZNF827Q17R98 1081 aa15.94■□□□□ 0.14
FAM228B-203ENST00000469867 SUPT16HQ9Y5B9 1047 aaKnown RBP15.94■□□□□ 0.14
FAM228B-203ENST00000469867 TNNT2P45379 298 aaPredicted RBP15.93■□□□□ 0.14
FAM228B-203ENST00000469867 SHANK3Q9BYB0 1731 aa15.93■□□□□ 0.14
FAM228B-203ENST00000469867 CGNL1Q0VF96 1302 aa15.93■□□□□ 0.14
FAM228B-203ENST00000469867 DOT1LQ8TEK3 1739 aa15.92■□□□□ 0.14
FAM228B-203ENST00000469867 EIF4G2P78344 907 aaKnown RBP eCLIP15.92■□□□□ 0.14
FAM228B-203ENST00000469867 HSPA5P11021 654 aaKnown RBP15.92■□□□□ 0.14
FAM228B-203ENST00000469867 TATP17735 454 aaPredicted RBP15.92■□□□□ 0.14
FAM228B-203ENST00000469867 MTFR1LQ9H019 292 aa15.92■□□□□ 0.14
FAM228B-203ENST00000469867 BCL11AQ9H165 835 aa15.91■□□□□ 0.14
FAM228B-203ENST00000469867 PAPPAQ13219 1627 aa15.91■□□□□ 0.14
FAM228B-203ENST00000469867 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
FAM228B-203ENST00000469867 NSD2O96028 1365 aa15.9■□□□□ 0.14
FAM228B-203ENST00000469867 SLC27A3Q5K4L6 730 aa15.9■□□□□ 0.14
FAM228B-203ENST00000469867 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
FAM228B-203ENST00000469867 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
FAM228B-203ENST00000469867 FHDC1Q9C0D6 1143 aaPredicted RBP15.89■□□□□ 0.13
FAM228B-203ENST00000469867 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
FAM228B-203ENST00000469867 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
FAM228B-203ENST00000469867 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
FAM228B-203ENST00000469867 CYP27B1O15528 508 aa15.88■□□□□ 0.13
FAM228B-203ENST00000469867 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
FAM228B-203ENST00000469867 SGIP1Q9BQI5 828 aa15.88■□□□□ 0.13
FAM228B-203ENST00000469867 POLKQ9UBT6 870 aa15.88■□□□□ 0.13
FAM228B-203ENST00000469867 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
FAM228B-203ENST00000469867 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
FAM228B-203ENST00000469867 PANK3Q9H999 370 aa15.87■□□□□ 0.13
FAM228B-203ENST00000469867 CCNL1Q9UK58 526 aaPredicted RBP15.87■□□□□ 0.13
FAM228B-203ENST00000469867 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
FAM228B-203ENST00000469867 SYT17Q9BSW7 474 aa15.87■□□□□ 0.13
FAM228B-203ENST00000469867 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
FAM228B-203ENST00000469867 EYA1Q99502 592 aa15.86■□□□□ 0.13
FAM228B-203ENST00000469867 YY1P25490 414 aa15.86■□□□□ 0.13
FAM228B-203ENST00000469867 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
FAM228B-203ENST00000469867 ARXQ96QS3 562 aa15.85■□□□□ 0.13
FAM228B-203ENST00000469867 LY75O60449 1722 aa15.84■□□□□ 0.13
FAM228B-203ENST00000469867 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.13
FAM228B-203ENST00000469867 KLHL34Q8N239 644 aa15.83■□□□□ 0.12
FAM228B-203ENST00000469867 ANP32EQ9BTT0 268 aa15.83■□□□□ 0.12
FAM228B-203ENST00000469867 MSH5O43196 834 aa15.83■□□□□ 0.12
FAM228B-203ENST00000469867 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
FAM228B-203ENST00000469867 PALLDQ8WX93 1383 aa15.81■□□□□ 0.12
FAM228B-203ENST00000469867 SPG7Q9UQ90 795 aa15.81■□□□□ 0.12
FAM228B-203ENST00000469867 TUBGCP6Q96RT7 1819 aa15.81■□□□□ 0.12
FAM228B-203ENST00000469867 NCAPD2Q15021 1401 aa15.81■□□□□ 0.12
FAM228B-203ENST00000469867 SLC16A10Q8TF71 515 aa15.8■□□□□ 0.12
FAM228B-203ENST00000469867 PIGBQ92521 554 aa15.8■□□□□ 0.12
FAM228B-203ENST00000469867 TOGARAM1Q9Y4F4 1720 aa15.79■□□□□ 0.12
FAM228B-203ENST00000469867 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
FAM228B-203ENST00000469867 POLD1P28340 1107 aa15.78■□□□□ 0.12
FAM228B-203ENST00000469867 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
FAM228B-203ENST00000469867 MSL1Q68DK7 614 aa15.78■□□□□ 0.12
FAM228B-203ENST00000469867 ITGB4P16144 1822 aa15.78■□□□□ 0.12
FAM228B-203ENST00000469867 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.12
FAM228B-203ENST00000469867 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
FAM228B-203ENST00000469867 KNSTRNQ9Y448 316 aa15.77■□□□□ 0.11
FAM228B-203ENST00000469867 PHKG2P15735 406 aa15.76■□□□□ 0.11
FAM228B-203ENST00000469867 SMIM5Q71RC9 77 aa15.76■□□□□ 0.11
FAM228B-203ENST00000469867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.76■□□□□ 0.11
FAM228B-203ENST00000469867 QSER1Q2KHR3 1735 aa15.76■□□□□ 0.11
FAM228B-203ENST00000469867 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
FAM228B-203ENST00000469867 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
FAM228B-203ENST00000469867 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
FAM228B-203ENST00000469867 AMIGO3Q86WK7 504 aa15.75■□□□□ 0.11
FAM228B-203ENST00000469867 C5P01031 1676 aa15.75■□□□□ 0.11
FAM228B-203ENST00000469867 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
FAM228B-203ENST00000469867 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
FAM228B-203ENST00000469867 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
FAM228B-203ENST00000469867 PHF14O94880 888 aa15.74■□□□□ 0.11
FAM228B-203ENST00000469867 AEBP1Q8IUX7 1158 aa15.74■□□□□ 0.11
FAM228B-203ENST00000469867 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 SIK1P57059 783 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 NLGN2Q8NFZ4 835 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 TAF1LQ8IZX4 1826 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 MAP3K5Q99683 1374 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 GPR162Q16538 588 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 AK7Q96M32 723 aa15.73■□□□□ 0.11
FAM228B-203ENST00000469867 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms