RNA–Protein interactions for RNA: ENST00000469302.1

TUBGCP3-205, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 2

Gene TUBGCP3, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-205ENST00000469302 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
TUBGCP3-205ENST00000469302 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
TUBGCP3-205ENST00000469302 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
TUBGCP3-205ENST00000469302 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
TUBGCP3-205ENST00000469302 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
TUBGCP3-205ENST00000469302 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
TUBGCP3-205ENST00000469302 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
TUBGCP3-205ENST00000469302 KCNQ4P56696 695 aa12.69□□□□□ -0.38
TUBGCP3-205ENST00000469302 UBR3Q6ZT12 1888 aa12.69□□□□□ -0.38
TUBGCP3-205ENST00000469302 NSD2O96028 1365 aa12.69□□□□□ -0.38
TUBGCP3-205ENST00000469302 KIF13BQ9NQT8 1826 aa12.68□□□□□ -0.38
TUBGCP3-205ENST00000469302 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
TUBGCP3-205ENST00000469302 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
TUBGCP3-205ENST00000469302 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
TUBGCP3-205ENST00000469302 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
TUBGCP3-205ENST00000469302 JMYQ8N9B5 988 aa12.67□□□□□ -0.38
TUBGCP3-205ENST00000469302 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
TUBGCP3-205ENST00000469302 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
TUBGCP3-205ENST00000469302 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
TUBGCP3-205ENST00000469302 EVC2Q86UK5 1308 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 C4BP0C0L5 1744 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 DDX54Q8TDD1 881 aaKnown RBP12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 PCGF6Q9BYE7 350 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 KTN1Q86UP2 1357 aaKnown RBP12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 USP47Q96K76 1375 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
TUBGCP3-205ENST00000469302 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
TUBGCP3-205ENST00000469302 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
TUBGCP3-205ENST00000469302 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
TUBGCP3-205ENST00000469302 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
TUBGCP3-205ENST00000469302 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
TUBGCP3-205ENST00000469302 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
TUBGCP3-205ENST00000469302 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
TUBGCP3-205ENST00000469302 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
TUBGCP3-205ENST00000469302 NSD3Q9BZ95 1437 aa12.63□□□□□ -0.39
TUBGCP3-205ENST00000469302 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
TUBGCP3-205ENST00000469302 WWC3Q9ULE0 1092 aa12.62□□□□□ -0.39
TUBGCP3-205ENST00000469302 ITGB4P16144 1822 aa12.62□□□□□ -0.39
TUBGCP3-205ENST00000469302 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
TUBGCP3-205ENST00000469302 SLC34A2O95436 690 aa12.6□□□□□ -0.39
TUBGCP3-205ENST00000469302 FSTL1Q12841 308 aa12.6□□□□□ -0.39
TUBGCP3-205ENST00000469302 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
TUBGCP3-205ENST00000469302 NMRK2Q9NPI5 230 aa12.6□□□□□ -0.39
TUBGCP3-205ENST00000469302 MEGF6O75095 1541 aa12.59□□□□□ -0.39
TUBGCP3-205ENST00000469302 C10orf71Q711Q0 1435 aa12.59□□□□□ -0.39
TUBGCP3-205ENST00000469302 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
TUBGCP3-205ENST00000469302 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
TUBGCP3-205ENST00000469302 HTRA3P83110 453 aa12.58□□□□□ -0.4
TUBGCP3-205ENST00000469302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
TUBGCP3-205ENST00000469302 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
TUBGCP3-205ENST00000469302 AK7Q96M32 723 aa12.58□□□□□ -0.4
TUBGCP3-205ENST00000469302 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
TUBGCP3-205ENST00000469302 NME9Q86XW9 330 aa12.57□□□□□ -0.4
TUBGCP3-205ENST00000469302 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
TUBGCP3-205ENST00000469302 EDC4Q6P2E9 1401 aaKnown RBP12.56□□□□□ -0.4
TUBGCP3-205ENST00000469302 IP6K1Q92551 441 aa12.56□□□□□ -0.4
TUBGCP3-205ENST00000469302 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
TUBGCP3-205ENST00000469302 SBF1O95248 1867 aa12.56□□□□□ -0.4
TUBGCP3-205ENST00000469302 KCPQ6ZWJ8 1503 aa12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 PHF14O94880 888 aa12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 SSFA2P28290 1259 aa12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 KDM2BQ8NHM5 1336 aa12.54□□□□□ -0.4
TUBGCP3-205ENST00000469302 HSPA1AP0DMV8 641 aaKnown RBP12.53□□□□□ -0.4
TUBGCP3-205ENST00000469302 HSPA1BP0DMV9 641 aaKnown RBP12.53□□□□□ -0.4
TUBGCP3-205ENST00000469302 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
TUBGCP3-205ENST00000469302 C4AP0C0L4 1744 aa12.52□□□□□ -0.41
TUBGCP3-205ENST00000469302 TGFB2P61812 414 aa12.52□□□□□ -0.41
TUBGCP3-205ENST00000469302 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
TUBGCP3-205ENST00000469302 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
TUBGCP3-205ENST00000469302 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
TUBGCP3-205ENST00000469302 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
TUBGCP3-205ENST00000469302 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
TUBGCP3-205ENST00000469302 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
TUBGCP3-205ENST00000469302 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
TUBGCP3-205ENST00000469302 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
TUBGCP3-205ENST00000469302 HOXC9P31274 260 aa12.5□□□□□ -0.41
TUBGCP3-205ENST00000469302 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
TUBGCP3-205ENST00000469302 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
TUBGCP3-205ENST00000469302 MMP10P09238 476 aa12.49□□□□□ -0.41
TUBGCP3-205ENST00000469302 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
TUBGCP3-205ENST00000469302 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
TUBGCP3-205ENST00000469302 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
TUBGCP3-205ENST00000469302 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
TUBGCP3-205ENST00000469302 FCHSD2O94868 740 aa12.48□□□□□ -0.41
TUBGCP3-205ENST00000469302 MPRIPQ6WCQ1 1025 aa12.48□□□□□ -0.41
TUBGCP3-205ENST00000469302 AMPHP49418 695 aa12.47□□□□□ -0.41
TUBGCP3-205ENST00000469302 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
TUBGCP3-205ENST00000469302 TIAM2Q8IVF5 1701 aa12.47□□□□□ -0.41
TUBGCP3-205ENST00000469302 ZNF831Q5JPB2 1677 aa12.47□□□□□ -0.41
TUBGCP3-205ENST00000469302 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.41
TUBGCP3-205ENST00000469302 COL5A3P25940 1745 aaPredicted RBP12.46□□□□□ -0.41
TUBGCP3-205ENST00000469302 A0A0G2JLW4 131 aa12.46□□□□□ -0.41
TUBGCP3-205ENST00000469302 GNPATO15228 680 aa12.46□□□□□ -0.41
TUBGCP3-205ENST00000469302 TATP17735 454 aaPredicted RBP12.46□□□□□ -0.41
TUBGCP3-205ENST00000469302 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms