RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 EXOSC9Q06265 439 aaKnown RBP12.21□□□□□ -0.46
NUP50-214ENST00000469163 OS9Q13438 667 aaPredicted RBP12.21□□□□□ -0.46
NUP50-214ENST00000469163 REREQ9P2R6 1566 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
NUP50-214ENST00000469163 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
NUP50-214ENST00000469163 LRPPRCP42704 1394 aaKnown RBP12.2□□□□□ -0.46
NUP50-214ENST00000469163 LMTK2Q8IWU2 1503 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 TOM1L2Q6ZVM7 507 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 ZNF526Q8TF50 670 aaPredicted RBP12.19□□□□□ -0.46
NUP50-214ENST00000469163 KIF1BO60333 1816 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
NUP50-214ENST00000469163 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 TSC1Q92574 1164 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
NUP50-214ENST00000469163 CCDC66A2RUB6 948 aa12.18□□□□□ -0.46
NUP50-214ENST00000469163 MCM4P33991 863 aa12.18□□□□□ -0.46
NUP50-214ENST00000469163 MPNDQ8N594 471 aa12.18□□□□□ -0.46
NUP50-214ENST00000469163 TIGD1Q96MW7 591 aa12.18□□□□□ -0.46
NUP50-214ENST00000469163 C19orf44Q9H6X5 657 aa12.18□□□□□ -0.46
NUP50-214ENST00000469163 SYNMO15061 1565 aa12.18□□□□□ -0.46
NUP50-214ENST00000469163 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
NUP50-214ENST00000469163 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
NUP50-214ENST00000469163 SLC20A2Q08357 652 aa12.17□□□□□ -0.46
NUP50-214ENST00000469163 AGLP35573 1532 aa12.17□□□□□ -0.46
NUP50-214ENST00000469163 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
NUP50-214ENST00000469163 ANXA1P04083 346 aa12.17□□□□□ -0.46
NUP50-214ENST00000469163 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
NUP50-214ENST00000469163 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
NUP50-214ENST00000469163 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
NUP50-214ENST00000469163 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
NUP50-214ENST00000469163 C1orf115Q9H7X2 142 aa12.16□□□□□ -0.46
NUP50-214ENST00000469163 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
NUP50-214ENST00000469163 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
NUP50-214ENST00000469163 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
NUP50-214ENST00000469163 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
NUP50-214ENST00000469163 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.46
NUP50-214ENST00000469163 MROH2AA6NES4 1674 aa12.15□□□□□ -0.46
NUP50-214ENST00000469163 PARD3Q8TEW0 1356 aa12.15□□□□□ -0.46
NUP50-214ENST00000469163 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
NUP50-214ENST00000469163 PHF14O94880 888 aa12.15□□□□□ -0.47
NUP50-214ENST00000469163 GCP02774 474 aa12.15□□□□□ -0.47
NUP50-214ENST00000469163 TEFQ10587 303 aa12.15□□□□□ -0.47
NUP50-214ENST00000469163 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.47
NUP50-214ENST00000469163 PIK3C2BO00750 1634 aa12.14□□□□□ -0.47
NUP50-214ENST00000469163 MADDQ8WXG6 1647 aa12.14□□□□□ -0.47
NUP50-214ENST00000469163 RAPGEF4Q8WZA2 1011 aa12.14□□□□□ -0.47
NUP50-214ENST00000469163 RRP1P56182 461 aaKnown RBP12.14□□□□□ -0.47
NUP50-214ENST00000469163 SLAIN2Q9P270 581 aa12.14□□□□□ -0.47
NUP50-214ENST00000469163 ABCC11Q96J66 1382 aa12.14□□□□□ -0.47
NUP50-214ENST00000469163 PTCD1O75127 700 aaKnown RBP12.14□□□□□ -0.47
NUP50-214ENST00000469163 FAM177BA6PVY3 158 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 CSPP1Q1MSJ5 1256 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
NUP50-214ENST00000469163 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
NUP50-214ENST00000469163 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
NUP50-214ENST00000469163 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
NUP50-214ENST00000469163 TMX1Q9H3N1 280 aa12.12□□□□□ -0.47
NUP50-214ENST00000469163 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
NUP50-214ENST00000469163 ZC3H13Q5T200 1668 aaKnown RBP12.12□□□□□ -0.47
NUP50-214ENST00000469163 ERICH4A6NGS2 130 aa12.12□□□□□ -0.47
NUP50-214ENST00000469163 TNNT1P13805 278 aa12.12□□□□□ -0.47
NUP50-214ENST00000469163 EYA1Q99502 592 aa12.12□□□□□ -0.47
NUP50-214ENST00000469163 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
NUP50-214ENST00000469163 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
NUP50-214ENST00000469163 PREX1Q8TCU6 1659 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 SLC39A6Q13433 755 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 EGFL6Q8IUX8 553 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 MSH6P52701 1360 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 MCCP23508 829 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 RIMS1Q86UR5 1692 aaKnown RBP12.11□□□□□ -0.47
NUP50-214ENST00000469163 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
NUP50-214ENST00000469163 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
NUP50-214ENST00000469163 CAPN2P17655 700 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 ASXL1Q8IXJ9 1541 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 MYO5BQ9ULV0 1848 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 PLEKHG1Q9ULL1 1385 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
NUP50-214ENST00000469163 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
NUP50-214ENST00000469163 C8orf37Q96NL8 207 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms