RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
ITGA4-205ENST00000468948 E9PSI1 815 aa12.63□□□□□ -0.39
ITGA4-205ENST00000468948 ZBTB24O43167 697 aaPredicted RBP12.63□□□□□ -0.39
ITGA4-205ENST00000468948 RAB15P59190 212 aa12.63□□□□□ -0.39
ITGA4-205ENST00000468948 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-205ENST00000468948 KCTD15Q96SI1 283 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-205ENST00000468948 HINFPQ9BQA5 517 aa12.62□□□□□ -0.39
ITGA4-205ENST00000468948 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
ITGA4-205ENST00000468948 MYCP01106 439 aaPredicted RBP12.6□□□□□ -0.39
ITGA4-205ENST00000468948 OCLNQ16625 522 aa12.6□□□□□ -0.39
ITGA4-205ENST00000468948 LGR5O75473 907 aa12.59□□□□□ -0.39
ITGA4-205ENST00000468948 TAS1R3Q7RTX0 852 aa12.59□□□□□ -0.39
ITGA4-205ENST00000468948 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
ITGA4-205ENST00000468948 ABL1P00519 1130 aa12.57□□□□□ -0.4
ITGA4-205ENST00000468948 VARSP26640 1264 aaKnown RBP12.57□□□□□ -0.4
ITGA4-205ENST00000468948 TRIM32Q13049 653 aa12.57□□□□□ -0.4
ITGA4-205ENST00000468948 VASH1Q7L8A9 365 aaPredicted RBP12.56□□□□□ -0.4
ITGA4-205ENST00000468948 ESF1Q9H501 851 aaKnown RBP12.56□□□□□ -0.4
ITGA4-205ENST00000468948 ERCC3P19447 782 aa12.55□□□□□ -0.4
ITGA4-205ENST00000468948 RNF223E7ERA6 249 aa12.54□□□□□ -0.4
ITGA4-205ENST00000468948 M0R2N6 131 aa12.54□□□□□ -0.4
ITGA4-205ENST00000468948 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
ITGA4-205ENST00000468948 KCNC4Q03721 635 aa12.54□□□□□ -0.4
ITGA4-205ENST00000468948 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
ITGA4-205ENST00000468948 DNAJC14Q6Y2X3 702 aaPredicted RBP12.54□□□□□ -0.4
ITGA4-205ENST00000468948 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
ITGA4-205ENST00000468948 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
ITGA4-205ENST00000468948 MAP4K5Q9Y4K4 846 aa12.54□□□□□ -0.4
ITGA4-205ENST00000468948 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
ITGA4-205ENST00000468948 SCTRP47872 440 aa12.53□□□□□ -0.4
ITGA4-205ENST00000468948 WNT7BP56706 349 aa12.53□□□□□ -0.4
ITGA4-205ENST00000468948 SKOR1P84550 965 aa12.53□□□□□ -0.4
ITGA4-205ENST00000468948 EGFL7Q9UHF1 273 aa12.53□□□□□ -0.4
ITGA4-205ENST00000468948 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
ITGA4-205ENST00000468948 ANKLE1Q8NAG6 615 aa12.52□□□□□ -0.41
ITGA4-205ENST00000468948 ANO2Q9NQ90 1003 aa12.52□□□□□ -0.41
ITGA4-205ENST00000468948 WEE1P30291 646 aa12.51□□□□□ -0.41
ITGA4-205ENST00000468948 GGCXP38435 758 aa12.51□□□□□ -0.41
ITGA4-205ENST00000468948 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
ITGA4-205ENST00000468948 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
ITGA4-205ENST00000468948 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
ITGA4-205ENST00000468948 ZNF358Q9NW07 568 aa12.51□□□□□ -0.41
ITGA4-205ENST00000468948 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
ITGA4-205ENST00000468948 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
ITGA4-205ENST00000468948 H3BRB1 525 aa12.49□□□□□ -0.41
ITGA4-205ENST00000468948 ICMTO60725 284 aa12.49□□□□□ -0.41
ITGA4-205ENST00000468948 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
ITGA4-205ENST00000468948 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
ITGA4-205ENST00000468948 GTF3C2Q8WUA4 911 aaPredicted RBP12.49□□□□□ -0.41
ITGA4-205ENST00000468948 TUT1Q9H6E5 874 aaKnown RBP12.49□□□□□ -0.41
ITGA4-205ENST00000468948 SEPT3Q9UH03 358 aa12.49□□□□□ -0.41
ITGA4-205ENST00000468948 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
ITGA4-205ENST00000468948 GLYCTKQ8IVS8 523 aa12.48□□□□□ -0.41
ITGA4-205ENST00000468948 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
ITGA4-205ENST00000468948 RPIAP49247 311 aa12.47□□□□□ -0.41
ITGA4-205ENST00000468948 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
ITGA4-205ENST00000468948 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
ITGA4-205ENST00000468948 TRIM52Q96A61 297 aa12.47□□□□□ -0.41
ITGA4-205ENST00000468948 UNCXA6NJT0 531 aa12.46□□□□□ -0.41
ITGA4-205ENST00000468948 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
ITGA4-205ENST00000468948 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
ITGA4-205ENST00000468948 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
ITGA4-205ENST00000468948 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.41
ITGA4-205ENST00000468948 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
ITGA4-205ENST00000468948 CAPN12Q6ZSI9 719 aa12.45□□□□□ -0.42
ITGA4-205ENST00000468948 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
ITGA4-205ENST00000468948 OSBPL3Q9H4L5 887 aa12.45□□□□□ -0.42
ITGA4-205ENST00000468948 CYLDQ9NQC7 956 aa12.45□□□□□ -0.42
ITGA4-205ENST00000468948 DNMT3AQ9Y6K1 912 aaPredicted RBP12.45□□□□□ -0.42
ITGA4-205ENST00000468948 BACH1O14867 736 aa12.44□□□□□ -0.42
ITGA4-205ENST00000468948 CD2BP2O95400 341 aaKnown RBP12.44□□□□□ -0.42
ITGA4-205ENST00000468948 FSHRP23945 695 aa12.44□□□□□ -0.42
ITGA4-205ENST00000468948 GDF10P55107 478 aa12.44□□□□□ -0.42
ITGA4-205ENST00000468948 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
ITGA4-205ENST00000468948 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
ITGA4-205ENST00000468948 RC3H1Q5TC82 1133 aaKnown RBP12.44□□□□□ -0.42
ITGA4-205ENST00000468948 ANKRD33BA6NCL7 494 aa12.43□□□□□ -0.42
ITGA4-205ENST00000468948 C21orf2O43822 256 aa12.43□□□□□ -0.42
ITGA4-205ENST00000468948 STAU1O95793 577 aaKnown RBP12.43□□□□□ -0.42
ITGA4-205ENST00000468948 IGFBP4P22692 258 aa12.43□□□□□ -0.42
ITGA4-205ENST00000468948 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
ITGA4-205ENST00000468948 SCG3Q8WXD2 468 aaKnown RBP12.43□□□□□ -0.42
ITGA4-205ENST00000468948 BCL2L13Q9BXK5 485 aa12.43□□□□□ -0.42
ITGA4-205ENST00000468948 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
ITGA4-205ENST00000468948 GRM5P41594 1212 aa12.42□□□□□ -0.42
ITGA4-205ENST00000468948 SCNN1DP51172 638 aa12.42□□□□□ -0.42
ITGA4-205ENST00000468948 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
ITGA4-205ENST00000468948 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
ITGA4-205ENST00000468948 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
ITGA4-205ENST00000468948 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
ITGA4-205ENST00000468948 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
ITGA4-205ENST00000468948 FOXO3O43524 673 aa12.41□□□□□ -0.42
ITGA4-205ENST00000468948 MTMR3Q13615 1198 aa12.41□□□□□ -0.42
ITGA4-205ENST00000468948 COL26A1Q96A83 441 aa12.41□□□□□ -0.42
ITGA4-205ENST00000468948 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
ITGA4-205ENST00000468948 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
ITGA4-205ENST00000468948 TLL2Q9Y6L7 1015 aa12.4□□□□□ -0.42
ITGA4-205ENST00000468948 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
ITGA4-205ENST00000468948 INHAP05111 366 aa12.39□□□□□ -0.43
ITGA4-205ENST00000468948 MAPK1P28482 360 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms