RNA–Protein interactions for RNA: ENST00000468727.5

ARHGEF3-206, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-206ENST00000468727 CARD11Q9BXL7 1154 aa17.8■□□□□ 0.44
ARHGEF3-206ENST00000468727 C1QTNF8P60827 252 aa17.79■□□□□ 0.44
ARHGEF3-206ENST00000468727 IP6K1Q92551 441 aa17.79■□□□□ 0.44
ARHGEF3-206ENST00000468727 ANKRD36BQ8N2N9 1353 aa17.79■□□□□ 0.44
ARHGEF3-206ENST00000468727 GPR162Q16538 588 aa17.78■□□□□ 0.44
ARHGEF3-206ENST00000468727 PRIM1P49642 420 aaKnown RBP17.77■□□□□ 0.44
ARHGEF3-206ENST00000468727 SLC27A3Q5K4L6 730 aa17.77■□□□□ 0.44
ARHGEF3-206ENST00000468727 PELP1Q8IZL8 1130 aaKnown RBP17.77■□□□□ 0.44
ARHGEF3-206ENST00000468727 SYTL4Q96C24 671 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF3-206ENST00000468727 MAP3K19Q56UN5 1328 aa17.76■□□□□ 0.43
ARHGEF3-206ENST00000468727 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
ARHGEF3-206ENST00000468727 HOXC9P31274 260 aa17.75■□□□□ 0.43
ARHGEF3-206ENST00000468727 CEP350Q5VT06 3117 aa17.75■□□□□ 0.43
ARHGEF3-206ENST00000468727 POLD1P28340 1107 aa17.74■□□□□ 0.43
ARHGEF3-206ENST00000468727 SLC16A10Q8TF71 515 aa17.74■□□□□ 0.43
ARHGEF3-206ENST00000468727 TERF2IPQ9NYB0 399 aa17.74■□□□□ 0.43
ARHGEF3-206ENST00000468727 TFCP2L1Q9NZI6 479 aa17.74■□□□□ 0.43
ARHGEF3-206ENST00000468727 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
ARHGEF3-206ENST00000468727 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
ARHGEF3-206ENST00000468727 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
ARHGEF3-206ENST00000468727 MAP2P11137 1827 aaKnown RBP17.71■□□□□ 0.43
ARHGEF3-206ENST00000468727 TESK2Q96S53 571 aa17.71■□□□□ 0.43
ARHGEF3-206ENST00000468727 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF3-206ENST00000468727 C4BP0C0L5 1744 aa17.71■□□□□ 0.43
ARHGEF3-206ENST00000468727 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
ARHGEF3-206ENST00000468727 COL23A1Q86Y22 540 aaPredicted RBP17.7■□□□□ 0.42
ARHGEF3-206ENST00000468727 ZCRB1Q8TBF4 217 aaKnown RBP17.7■□□□□ 0.42
ARHGEF3-206ENST00000468727 GIGYF1O75420 1035 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF3-206ENST00000468727 AMPHP49418 695 aa17.69■□□□□ 0.42
ARHGEF3-206ENST00000468727 RRS1Q15050 365 aaKnown RBP17.69■□□□□ 0.42
ARHGEF3-206ENST00000468727 COG3Q96JB2 828 aa17.69■□□□□ 0.42
ARHGEF3-206ENST00000468727 NBPF6Q5VWK0 638 aa17.68■□□□□ 0.42
ARHGEF3-206ENST00000468727 NBPF4Q96M43 638 aa17.68■□□□□ 0.42
ARHGEF3-206ENST00000468727 RTL1A6NKG5 1358 aa17.67■□□□□ 0.42
ARHGEF3-206ENST00000468727 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
ARHGEF3-206ENST00000468727 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
ARHGEF3-206ENST00000468727 USP47Q96K76 1375 aa17.66■□□□□ 0.42
ARHGEF3-206ENST00000468727 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
ARHGEF3-206ENST00000468727 MSH5O43196 834 aa17.66■□□□□ 0.42
ARHGEF3-206ENST00000468727 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
ARHGEF3-206ENST00000468727 ATP10DQ9P241 1426 aa17.64■□□□□ 0.42
ARHGEF3-206ENST00000468727 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
ARHGEF3-206ENST00000468727 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
ARHGEF3-206ENST00000468727 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
ARHGEF3-206ENST00000468727 N4BP2Q86UW6 1770 aaPredicted RBP17.62■□□□□ 0.41
ARHGEF3-206ENST00000468727 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
ARHGEF3-206ENST00000468727 PALLDQ8WX93 1383 aa17.62■□□□□ 0.41
ARHGEF3-206ENST00000468727 KIF13BQ9NQT8 1826 aa17.61■□□□□ 0.41
ARHGEF3-206ENST00000468727 FYB1O15117 783 aa17.61■□□□□ 0.41
ARHGEF3-206ENST00000468727 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
ARHGEF3-206ENST00000468727 SMG6Q86US8 1419 aaKnown RBP17.61■□□□□ 0.41
ARHGEF3-206ENST00000468727 ADCY9O60503 1353 aa17.6■□□□□ 0.41
ARHGEF3-206ENST00000468727 INSRP06213 1382 aa17.59■□□□□ 0.41
ARHGEF3-206ENST00000468727 CYP27B1O15528 508 aa17.59■□□□□ 0.41
ARHGEF3-206ENST00000468727 GRIN3BO60391 1043 aa17.59■□□□□ 0.41
ARHGEF3-206ENST00000468727 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
ARHGEF3-206ENST00000468727 CGNL1Q0VF96 1302 aa17.58■□□□□ 0.4
ARHGEF3-206ENST00000468727 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
ARHGEF3-206ENST00000468727 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
ARHGEF3-206ENST00000468727 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF3-206ENST00000468727 MPRIPQ6WCQ1 1025 aa17.58■□□□□ 0.4
ARHGEF3-206ENST00000468727 WWC3Q9ULE0 1092 aa17.58■□□□□ 0.4
ARHGEF3-206ENST00000468727 FLT4P35916 1363 aa17.57■□□□□ 0.4
ARHGEF3-206ENST00000468727 BRCA1P38398 1863 aaKnown RBP17.57■□□□□ 0.4
ARHGEF3-206ENST00000468727 NCAPD2Q15021 1401 aa17.56■□□□□ 0.4
ARHGEF3-206ENST00000468727 COL5A3P25940 1745 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF3-206ENST00000468727 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF3-206ENST00000468727 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
ARHGEF3-206ENST00000468727 PHF14O94880 888 aa17.54■□□□□ 0.4
ARHGEF3-206ENST00000468727 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
ARHGEF3-206ENST00000468727 C4AP0C0L4 1744 aa17.54■□□□□ 0.4
ARHGEF3-206ENST00000468727 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
ARHGEF3-206ENST00000468727 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF3-206ENST00000468727 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
ARHGEF3-206ENST00000468727 PIGBQ92521 554 aa17.52■□□□□ 0.4
ARHGEF3-206ENST00000468727 AK7Q96M32 723 aa17.52■□□□□ 0.4
ARHGEF3-206ENST00000468727 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
ARHGEF3-206ENST00000468727 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
ARHGEF3-206ENST00000468727 LINC00116Q8NCU8 138 aa17.51■□□□□ 0.39
ARHGEF3-206ENST00000468727 KIF24Q5T7B8 1368 aa17.51■□□□□ 0.39
ARHGEF3-206ENST00000468727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.5■□□□□ 0.39
ARHGEF3-206ENST00000468727 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
ARHGEF3-206ENST00000468727 CARD14Q9BXL6 1004 aa17.5■□□□□ 0.39
ARHGEF3-206ENST00000468727 GPBP1L1Q9HC44 474 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF3-206ENST00000468727 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
ARHGEF3-206ENST00000468727 TMF1P82094 1093 aa17.49■□□□□ 0.39
ARHGEF3-206ENST00000468727 ARFGEF1Q9Y6D6 1849 aa17.49■□□□□ 0.39
ARHGEF3-206ENST00000468727 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
ARHGEF3-206ENST00000468727 ITPK1Q13572 414 aa17.48■□□□□ 0.39
ARHGEF3-206ENST00000468727 SMARCC1Q92922 1105 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF3-206ENST00000468727 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF3-206ENST00000468727 PXDNLA1KZ92 1463 aa17.47■□□□□ 0.39
ARHGEF3-206ENST00000468727 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
ARHGEF3-206ENST00000468727 SIK1P57059 783 aa17.46■□□□□ 0.39
ARHGEF3-206ENST00000468727 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
ARHGEF3-206ENST00000468727 HSPA6P17066 643 aa17.45■□□□□ 0.38
ARHGEF3-206ENST00000468727 SSFA2P28290 1259 aa17.45■□□□□ 0.38
ARHGEF3-206ENST00000468727 KDRP35968 1356 aa17.44■□□□□ 0.38
ARHGEF3-206ENST00000468727 GNPATO15228 680 aa17.44■□□□□ 0.38
ARHGEF3-206ENST00000468727 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms