RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 PRIM1P49642 420 aaKnown RBP25.28■■□□□ 1.64
COPS6-206ENST00000468499 TMC1Q8TDI8 760 aa25.28■■□□□ 1.64
COPS6-206ENST00000468499 LTV1Q96GA3 475 aaPredicted RBP25.27■■□□□ 1.64
COPS6-206ENST00000468499 C5P01031 1676 aa25.26■■□□□ 1.63
COPS6-206ENST00000468499 GIGYF1O75420 1035 aaPredicted RBP25.25■■□□□ 1.63
COPS6-206ENST00000468499 POLD1P28340 1107 aa25.25■■□□□ 1.63
COPS6-206ENST00000468499 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
COPS6-206ENST00000468499 TFCP2L1Q9NZI6 479 aa25.25■■□□□ 1.63
COPS6-206ENST00000468499 MAP3K19Q56UN5 1328 aa25.25■■□□□ 1.63
COPS6-206ENST00000468499 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
COPS6-206ENST00000468499 TAF1LQ8IZX4 1826 aa25.23■■□□□ 1.63
COPS6-206ENST00000468499 SYTL4Q96C24 671 aaPredicted RBP25.23■■□□□ 1.63
COPS6-206ENST00000468499 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
COPS6-206ENST00000468499 HOXC9P31274 260 aa25.22■■□□□ 1.63
COPS6-206ENST00000468499 COL23A1Q86Y22 540 aaPredicted RBP25.22■■□□□ 1.63
COPS6-206ENST00000468499 CARD11Q9BXL7 1154 aa25.22■■□□□ 1.63
COPS6-206ENST00000468499 CCNL1Q9UK58 526 aaPredicted RBP25.19■■□□□ 1.62
COPS6-206ENST00000468499 TERF2IPQ9NYB0 399 aa25.18■■□□□ 1.62
COPS6-206ENST00000468499 ZCRB1Q8TBF4 217 aaKnown RBP25.17■■□□□ 1.62
COPS6-206ENST00000468499 TESK2Q96S53 571 aa25.17■■□□□ 1.62
COPS6-206ENST00000468499 MSL1Q68DK7 614 aa25.16■■□□□ 1.62
COPS6-206ENST00000468499 ATP10DQ9P241 1426 aa25.16■■□□□ 1.62
COPS6-206ENST00000468499 NBPF6Q5VWK0 638 aa25.15■■□□□ 1.62
COPS6-206ENST00000468499 NBPF4Q96M43 638 aa25.15■■□□□ 1.62
COPS6-206ENST00000468499 PUS7Q96PZ0 661 aaKnown RBP25.15■■□□□ 1.62
COPS6-206ENST00000468499 ADCY9O60503 1353 aa25.14■■□□□ 1.61
COPS6-206ENST00000468499 IFFO2Q5TF58 517 aa25.13■■□□□ 1.61
COPS6-206ENST00000468499 AMIGO3Q86WK7 504 aa25.13■■□□□ 1.61
COPS6-206ENST00000468499 USHBP1Q8N6Y0 703 aa25.13■■□□□ 1.61
COPS6-206ENST00000468499 ITGB4P16144 1822 aa25.13■■□□□ 1.61
COPS6-206ENST00000468499 RTL1A6NKG5 1358 aa25.12■■□□□ 1.61
COPS6-206ENST00000468499 UBR3Q6ZT12 1888 aa25.12■■□□□ 1.61
COPS6-206ENST00000468499 C4BP0C0L5 1744 aa25.12■■□□□ 1.61
COPS6-206ENST00000468499 USP47Q96K76 1375 aa25.11■■□□□ 1.61
COPS6-206ENST00000468499 RRS1Q15050 365 aaKnown RBP25.1■■□□□ 1.61
COPS6-206ENST00000468499 COG3Q96JB2 828 aa25.1■■□□□ 1.61
COPS6-206ENST00000468499 GRIN3BO60391 1043 aa25.09■■□□□ 1.61
COPS6-206ENST00000468499 AMPHP49418 695 aa25.09■■□□□ 1.61
COPS6-206ENST00000468499 MAP2P11137 1827 aaKnown RBP25.09■■□□□ 1.61
COPS6-206ENST00000468499 PKD1L3Q7Z443 1732 aa25.09■■□□□ 1.61
COPS6-206ENST00000468499 MSH5O43196 834 aa25.08■■□□□ 1.61
COPS6-206ENST00000468499 KIF20BQ96Q89 1820 aa25.06■■□□□ 1.6
COPS6-206ENST00000468499 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
COPS6-206ENST00000468499 SMIM5Q71RC9 77 aa25.05■■□□□ 1.6
COPS6-206ENST00000468499 ST20-MTHFSA0A0A6YYL1 179 aa25.04■■□□□ 1.6
COPS6-206ENST00000468499 CD2APQ9Y5K6 639 aa25.04■■□□□ 1.6
COPS6-206ENST00000468499 FYB1O15117 783 aa25.03■■□□□ 1.6
COPS6-206ENST00000468499 CYP27B1O15528 508 aa25.02■■□□□ 1.6
COPS6-206ENST00000468499 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
COPS6-206ENST00000468499 KIAA1551Q9HCM1 1747 aa25.02■■□□□ 1.6
COPS6-206ENST00000468499 CGNL1Q0VF96 1302 aa25.02■■□□□ 1.6
COPS6-206ENST00000468499 HSP90AB2PQ58FF8 381 aa25.01■■□□□ 1.59
COPS6-206ENST00000468499 INSRP06213 1382 aa25■■□□□ 1.59
COPS6-206ENST00000468499 NCAPD2Q15021 1401 aa24.99■■□□□ 1.59
COPS6-206ENST00000468499 CICQ96RK0 1608 aaPredicted RBP24.99■■□□□ 1.59
COPS6-206ENST00000468499 PCDH11XQ9BZA7 1347 aa24.99■■□□□ 1.59
COPS6-206ENST00000468499 PCDH11YQ9BZA8 1340 aa24.99■■□□□ 1.59
COPS6-206ENST00000468499 MPRIPQ6WCQ1 1025 aa24.98■■□□□ 1.59
COPS6-206ENST00000468499 RAPGEF4Q8WZA2 1011 aa24.98■■□□□ 1.59
COPS6-206ENST00000468499 WWC3Q9ULE0 1092 aa24.98■■□□□ 1.59
COPS6-206ENST00000468499 ANKRD26Q9UPS8 1709 aa24.98■■□□□ 1.59
COPS6-206ENST00000468499 TATP17735 454 aaPredicted RBP24.97■■□□□ 1.59
COPS6-206ENST00000468499 SMG6Q86US8 1419 aaKnown RBP24.96■■□□□ 1.59
COPS6-206ENST00000468499 IGSF1Q8N6C5 1336 aa24.96■■□□□ 1.59
COPS6-206ENST00000468499 ZNF526Q8TF50 670 aaPredicted RBP24.96■■□□□ 1.59
COPS6-206ENST00000468499 GPBP1L1Q9HC44 474 aaPredicted RBP24.96■■□□□ 1.59
COPS6-206ENST00000468499 TONSLQ96HA7 1378 aa24.95■■□□□ 1.59
COPS6-206ENST00000468499 KIF13BQ9NQT8 1826 aa24.95■■□□□ 1.58
COPS6-206ENST00000468499 FLT4P35916 1363 aa24.94■■□□□ 1.58
COPS6-206ENST00000468499 FLAD1Q8NFF5 587 aa24.94■■□□□ 1.58
COPS6-206ENST00000468499 HSPA6P17066 643 aa24.93■■□□□ 1.58
COPS6-206ENST00000468499 PIGBQ92521 554 aa24.93■■□□□ 1.58
COPS6-206ENST00000468499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.92■■□□□ 1.58
COPS6-206ENST00000468499 PHF14O94880 888 aa24.92■■□□□ 1.58
COPS6-206ENST00000468499 LINC00116Q8NCU8 138 aa24.92■■□□□ 1.58
COPS6-206ENST00000468499 KIF3CO14782 793 aa24.9■■□□□ 1.58
COPS6-206ENST00000468499 AK7Q96M32 723 aa24.9■■□□□ 1.58
COPS6-206ENST00000468499 EMILIN1Q9Y6C2 1016 aa24.9■■□□□ 1.58
COPS6-206ENST00000468499 KIF24Q5T7B8 1368 aa24.9■■□□□ 1.58
COPS6-206ENST00000468499 N4BP2Q86UW6 1770 aaPredicted RBP24.9■■□□□ 1.58
COPS6-206ENST00000468499 ITPK1Q13572 414 aa24.88■■□□□ 1.57
COPS6-206ENST00000468499 NKX1-1Q15270 411 aaPredicted RBP24.88■■□□□ 1.57
COPS6-206ENST00000468499 PXDNLA1KZ92 1463 aa24.87■■□□□ 1.57
COPS6-206ENST00000468499 SMARCC1Q92922 1105 aaPredicted RBP24.86■■□□□ 1.57
COPS6-206ENST00000468499 CARD14Q9BXL6 1004 aa24.86■■□□□ 1.57
COPS6-206ENST00000468499 BRCA1P38398 1863 aaKnown RBP24.85■■□□□ 1.57
COPS6-206ENST00000468499 LOC102724428A0A0B4J2F2 783 aa24.85■■□□□ 1.57
COPS6-206ENST00000468499 SSFA2P28290 1259 aa24.85■■□□□ 1.57
COPS6-206ENST00000468499 SIK1P57059 783 aa24.85■■□□□ 1.57
COPS6-206ENST00000468499 NSD3Q9BZ95 1437 aa24.84■■□□□ 1.57
COPS6-206ENST00000468499 ASAP1Q9ULH1 1129 aa24.83■■□□□ 1.57
COPS6-206ENST00000468499 COL5A3P25940 1745 aaPredicted RBP24.83■■□□□ 1.57
COPS6-206ENST00000468499 KDRP35968 1356 aa24.82■■□□□ 1.56
COPS6-206ENST00000468499 ZNF831Q5JPB2 1677 aa24.8■■□□□ 1.56
COPS6-206ENST00000468499 C4AP0C0L4 1744 aa24.79■■□□□ 1.56
COPS6-206ENST00000468499 GNPATO15228 680 aa24.79■■□□□ 1.56
COPS6-206ENST00000468499 SLC4A9Q96Q91 983 aa24.79■■□□□ 1.56
COPS6-206ENST00000468499 C10orf71Q711Q0 1435 aa24.78■■□□□ 1.56
COPS6-206ENST00000468499 TMF1P82094 1093 aa24.78■■□□□ 1.56
COPS6-206ENST00000468499 EYA1Q99502 592 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms