RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
RPP40-204ENST00000468105 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
RPP40-204ENST00000468105 COL23A1Q86Y22 540 aaPredicted RBP19.37■□□□□ 0.69
RPP40-204ENST00000468105 IP6K1Q92551 441 aa19.37■□□□□ 0.69
RPP40-204ENST00000468105 MEGF6O75095 1541 aa19.36■□□□□ 0.69
RPP40-204ENST00000468105 TMC1Q8TDI8 760 aa19.36■□□□□ 0.69
RPP40-204ENST00000468105 TFCP2L1Q9NZI6 479 aa19.36■□□□□ 0.69
RPP40-204ENST00000468105 ANKRD36BQ8N2N9 1353 aa19.35■□□□□ 0.69
RPP40-204ENST00000468105 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
RPP40-204ENST00000468105 SYTL4Q96C24 671 aaPredicted RBP19.35■□□□□ 0.69
RPP40-204ENST00000468105 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
RPP40-204ENST00000468105 POLD1P28340 1107 aa19.34■□□□□ 0.69
RPP40-204ENST00000468105 MAP3K19Q56UN5 1328 aa19.33■□□□□ 0.69
RPP40-204ENST00000468105 MSL1Q68DK7 614 aa19.33■□□□□ 0.68
RPP40-204ENST00000468105 AMIGO3Q86WK7 504 aa19.33■□□□□ 0.68
RPP40-204ENST00000468105 HOXC9P31274 260 aa19.31■□□□□ 0.68
RPP40-204ENST00000468105 SMIM5Q71RC9 77 aa19.31■□□□□ 0.68
RPP40-204ENST00000468105 CCNL1Q9UK58 526 aaPredicted RBP19.3■□□□□ 0.68
RPP40-204ENST00000468105 ATP10DQ9P241 1426 aa19.3■□□□□ 0.68
RPP40-204ENST00000468105 NBPF6Q5VWK0 638 aa19.29■□□□□ 0.68
RPP40-204ENST00000468105 USHBP1Q8N6Y0 703 aa19.29■□□□□ 0.68
RPP40-204ENST00000468105 NBPF4Q96M43 638 aa19.29■□□□□ 0.68
RPP40-204ENST00000468105 HDGFL2Q7Z4V5 671 aaPredicted RBP19.28■□□□□ 0.68
RPP40-204ENST00000468105 ZCRB1Q8TBF4 217 aaKnown RBP19.28■□□□□ 0.68
RPP40-204ENST00000468105 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
RPP40-204ENST00000468105 TOGARAM1Q9Y4F4 1720 aa19.26■□□□□ 0.67
RPP40-204ENST00000468105 C5P01031 1676 aa19.25■□□□□ 0.67
RPP40-204ENST00000468105 ADCY9O60503 1353 aa19.25■□□□□ 0.67
RPP40-204ENST00000468105 MSH5O43196 834 aa19.25■□□□□ 0.67
RPP40-204ENST00000468105 TESK2Q96S53 571 aa19.25■□□□□ 0.67
RPP40-204ENST00000468105 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
RPP40-204ENST00000468105 TAF1LQ8IZX4 1826 aa19.24■□□□□ 0.67
RPP40-204ENST00000468105 RRS1Q15050 365 aaKnown RBP19.24■□□□□ 0.67
RPP40-204ENST00000468105 GRIN3BO60391 1043 aa19.23■□□□□ 0.67
RPP40-204ENST00000468105 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
RPP40-204ENST00000468105 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
RPP40-204ENST00000468105 USP47Q96K76 1375 aa19.2■□□□□ 0.66
RPP40-204ENST00000468105 AMPHP49418 695 aa19.2■□□□□ 0.66
RPP40-204ENST00000468105 COG3Q96JB2 828 aa19.19■□□□□ 0.66
RPP40-204ENST00000468105 CYP27B1O15528 508 aa19.18■□□□□ 0.66
RPP40-204ENST00000468105 PUS7Q96PZ0 661 aaKnown RBP19.18■□□□□ 0.66
RPP40-204ENST00000468105 CD2APQ9Y5K6 639 aa19.18■□□□□ 0.66
RPP40-204ENST00000468105 C4BP0C0L5 1744 aa19.17■□□□□ 0.66
RPP40-204ENST00000468105 FYB1O15117 783 aa19.17■□□□□ 0.66
RPP40-204ENST00000468105 HSP90AB2PQ58FF8 381 aa19.17■□□□□ 0.66
RPP40-204ENST00000468105 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
RPP40-204ENST00000468105 PALLDQ8WX93 1383 aa19.17■□□□□ 0.66
RPP40-204ENST00000468105 ITGB4P16144 1822 aa19.16■□□□□ 0.66
RPP40-204ENST00000468105 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
RPP40-204ENST00000468105 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
RPP40-204ENST00000468105 MPRIPQ6WCQ1 1025 aa19.16■□□□□ 0.66
RPP40-204ENST00000468105 HSPA6P17066 643 aa19.15■□□□□ 0.66
RPP40-204ENST00000468105 GPBP1L1Q9HC44 474 aaPredicted RBP19.15■□□□□ 0.66
RPP40-204ENST00000468105 MAP2P11137 1827 aaKnown RBP19.15■□□□□ 0.66
RPP40-204ENST00000468105 KIF3CO14782 793 aa19.14■□□□□ 0.65
RPP40-204ENST00000468105 IGSF1Q8N6C5 1336 aa19.14■□□□□ 0.65
RPP40-204ENST00000468105 RTL1A6NKG5 1358 aa19.14■□□□□ 0.65
RPP40-204ENST00000468105 PHF14O94880 888 aa19.12■□□□□ 0.65
RPP40-204ENST00000468105 PIGBQ92521 554 aa19.12■□□□□ 0.65
RPP40-204ENST00000468105 LINC00116Q8NCU8 138 aa19.11■□□□□ 0.65
RPP40-204ENST00000468105 RAPGEF4Q8WZA2 1011 aa19.11■□□□□ 0.65
RPP40-204ENST00000468105 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
RPP40-204ENST00000468105 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
RPP40-204ENST00000468105 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.1■□□□□ 0.65
RPP40-204ENST00000468105 TATP17735 454 aaPredicted RBP19.1■□□□□ 0.65
RPP40-204ENST00000468105 INSRP06213 1382 aa19.09■□□□□ 0.65
RPP40-204ENST00000468105 CGNL1Q0VF96 1302 aa19.09■□□□□ 0.65
RPP40-204ENST00000468105 ITPK1Q13572 414 aa19.09■□□□□ 0.65
RPP40-204ENST00000468105 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.65
RPP40-204ENST00000468105 PCDH11XQ9BZA7 1347 aa19.08■□□□□ 0.65
RPP40-204ENST00000468105 PCDH11YQ9BZA8 1340 aa19.08■□□□□ 0.65
RPP40-204ENST00000468105 FLAD1Q8NFF5 587 aa19.07■□□□□ 0.64
RPP40-204ENST00000468105 EMILIN1Q9Y6C2 1016 aa19.07■□□□□ 0.64
RPP40-204ENST00000468105 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
RPP40-204ENST00000468105 AK7Q96M32 723 aa19.06■□□□□ 0.64
RPP40-204ENST00000468105 CARD14Q9BXL6 1004 aa19.06■□□□□ 0.64
RPP40-204ENST00000468105 CICQ96RK0 1608 aaPredicted RBP19.06■□□□□ 0.64
RPP40-204ENST00000468105 NCAPD2Q15021 1401 aa19.06■□□□□ 0.64
RPP40-204ENST00000468105 NKX1-1Q15270 411 aaPredicted RBP19.05■□□□□ 0.64
RPP40-204ENST00000468105 ASAP1Q9ULH1 1129 aa19.05■□□□□ 0.64
RPP40-204ENST00000468105 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
RPP40-204ENST00000468105 N4BP2Q86UW6 1770 aaPredicted RBP19.04■□□□□ 0.64
RPP40-204ENST00000468105 DNAJC5GQ8N7S2 189 aa19.04■□□□□ 0.64
RPP40-204ENST00000468105 KIF20BQ96Q89 1820 aa19.03■□□□□ 0.64
RPP40-204ENST00000468105 LOC102724428A0A0B4J2F2 783 aa19.03■□□□□ 0.64
RPP40-204ENST00000468105 SIK1P57059 783 aa19.03■□□□□ 0.64
RPP40-204ENST00000468105 SLC4A9Q96Q91 983 aa19.03■□□□□ 0.64
RPP40-204ENST00000468105 FLT4P35916 1363 aa19.03■□□□□ 0.64
RPP40-204ENST00000468105 KIF13BQ9NQT8 1826 aa19.02■□□□□ 0.63
RPP40-204ENST00000468105 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
RPP40-204ENST00000468105 SSFA2P28290 1259 aa19.01■□□□□ 0.63
RPP40-204ENST00000468105 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
RPP40-204ENST00000468105 MMP10P09238 476 aa19■□□□□ 0.63
RPP40-204ENST00000468105 ATG3Q9NT62 314 aa19■□□□□ 0.63
RPP40-204ENST00000468105 TONSLQ96HA7 1378 aa19■□□□□ 0.63
RPP40-204ENST00000468105 A0A0G2JLW4 131 aa18.99■□□□□ 0.63
RPP40-204ENST00000468105 GNPATO15228 680 aa18.99■□□□□ 0.63
RPP40-204ENST00000468105 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
RPP40-204ENST00000468105 HTRA3P83110 453 aa18.98■□□□□ 0.63
RPP40-204ENST00000468105 EYA1Q99502 592 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms