RNA–Protein interactions for RNA: ENST00000467827.1

SDK1-205, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 5

Gene SDK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-205ENST00000467827 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
SDK1-205ENST00000467827 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
SDK1-205ENST00000467827 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
SDK1-205ENST00000467827 PLEKHG2Q9H7P9 1386 aa21.11■□□□□ 0.97
SDK1-205ENST00000467827 FCHSD2O94868 740 aa21.11■□□□□ 0.97
SDK1-205ENST00000467827 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
SDK1-205ENST00000467827 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
SDK1-205ENST00000467827 KDRP35968 1356 aa21.1■□□□□ 0.97
SDK1-205ENST00000467827 PCDH11XQ9BZA7 1347 aa21.1■□□□□ 0.97
SDK1-205ENST00000467827 PCDH11YQ9BZA8 1340 aa21.1■□□□□ 0.97
SDK1-205ENST00000467827 MARCH10Q8NA82 808 aaPredicted RBP21.1■□□□□ 0.97
SDK1-205ENST00000467827 TNS2Q63HR2 1409 aa21.1■□□□□ 0.97
SDK1-205ENST00000467827 MEGF6O75095 1541 aa21.09■□□□□ 0.97
SDK1-205ENST00000467827 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.97
SDK1-205ENST00000467827 FAM182BQ5T319 152 aa21.08■□□□□ 0.97
SDK1-205ENST00000467827 CCDC125Q86Z20 511 aa21.08■□□□□ 0.97
SDK1-205ENST00000467827 PARP4Q9UKK3 1724 aaKnown RBP21.08■□□□□ 0.97
SDK1-205ENST00000467827 SF3B2Q13435 895 aaKnown RBP21.07■□□□□ 0.96
SDK1-205ENST00000467827 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
SDK1-205ENST00000467827 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
SDK1-205ENST00000467827 MRS2Q9HD23 443 aa21.06■□□□□ 0.96
SDK1-205ENST00000467827 HSP90AB1P08238 724 aaKnown RBP21.05■□□□□ 0.96
SDK1-205ENST00000467827 PRKAR2BP31323 418 aa21.05■□□□□ 0.96
SDK1-205ENST00000467827 ZNF530Q6P9A1 599 aaPredicted RBP21.05■□□□□ 0.96
SDK1-205ENST00000467827 RSPH6AQ9H0K4 717 aa21.04■□□□□ 0.96
SDK1-205ENST00000467827 GAS2L2Q8NHY3 880 aa21.03■□□□□ 0.96
SDK1-205ENST00000467827 LRRC37A3O60309 1634 aa21.03■□□□□ 0.96
SDK1-205ENST00000467827 BRWD3Q6RI45 1802 aa21.02■□□□□ 0.96
SDK1-205ENST00000467827 WNK3Q9BYP7 1800 aa21.02■□□□□ 0.96
SDK1-205ENST00000467827 RGPD1P0DJD0 1748 aa21.02■□□□□ 0.96
SDK1-205ENST00000467827 SOCS7O14512 581 aa21.02■□□□□ 0.96
SDK1-205ENST00000467827 CYP27B1O15528 508 aa21.02■□□□□ 0.96
SDK1-205ENST00000467827 TRIM37O94972 964 aa21.01■□□□□ 0.95
SDK1-205ENST00000467827 PHKG2P15735 406 aa21.01■□□□□ 0.95
SDK1-205ENST00000467827 BCL9O00512 1426 aa21.01■□□□□ 0.95
SDK1-205ENST00000467827 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
SDK1-205ENST00000467827 NKX1-1Q15270 411 aaPredicted RBP21■□□□□ 0.95
SDK1-205ENST00000467827 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
SDK1-205ENST00000467827 UPF1Q92900 1129 aaKnown RBP eCLIP21■□□□□ 0.95
SDK1-205ENST00000467827 MTHFSDQ2M296 383 aaKnown RBP20.99■□□□□ 0.95
SDK1-205ENST00000467827 DCAF5Q96JK2 942 aa20.99■□□□□ 0.95
SDK1-205ENST00000467827 BCL11BQ9C0K0 894 aaPredicted RBP20.99■□□□□ 0.95
SDK1-205ENST00000467827 ADAMTS8Q9UP79 889 aa20.99■□□□□ 0.95
SDK1-205ENST00000467827 SYTL4Q96C24 671 aaPredicted RBP20.98■□□□□ 0.95
SDK1-205ENST00000467827 ACSBG1Q96GR2 724 aa20.98■□□□□ 0.95
SDK1-205ENST00000467827 PHACTR3Q96KR7 559 aa20.97■□□□□ 0.95
SDK1-205ENST00000467827 PRIM1P49642 420 aaKnown RBP20.96■□□□□ 0.95
SDK1-205ENST00000467827 CCER2I3L3R5 266 aa20.95■□□□□ 0.94
SDK1-205ENST00000467827 APBA3O96018 575 aa20.95■□□□□ 0.94
SDK1-205ENST00000467827 BAG6P46379 1132 aa20.95■□□□□ 0.94
SDK1-205ENST00000467827 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
SDK1-205ENST00000467827 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
SDK1-205ENST00000467827 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
SDK1-205ENST00000467827 GNAT3A8MTJ3 354 aa20.94■□□□□ 0.94
SDK1-205ENST00000467827 ERVV-2B6SEH9 535 aa20.94■□□□□ 0.94
SDK1-205ENST00000467827 RTF1Q92541 710 aaKnown RBP20.94■□□□□ 0.94
SDK1-205ENST00000467827 PLEKHF1Q96S99 279 aa20.94■□□□□ 0.94
SDK1-205ENST00000467827 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
SDK1-205ENST00000467827 PKD1L3Q7Z443 1732 aa20.92■□□□□ 0.94
SDK1-205ENST00000467827 KCNQ2O43526 872 aa20.92■□□□□ 0.94
SDK1-205ENST00000467827 CABP4P57796 275 aa20.92■□□□□ 0.94
SDK1-205ENST00000467827 TMOD3Q9NYL9 352 aa20.92■□□□□ 0.94
SDK1-205ENST00000467827 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
SDK1-205ENST00000467827 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
SDK1-205ENST00000467827 MAP3K5Q99683 1374 aa20.9■□□□□ 0.94
SDK1-205ENST00000467827 CCDC146Q8IYE0 955 aa20.9■□□□□ 0.94
SDK1-205ENST00000467827 FAM9BQ8IZU0 186 aa20.89■□□□□ 0.93
SDK1-205ENST00000467827 MIER1Q8N108 512 aa20.89■□□□□ 0.93
SDK1-205ENST00000467827 PLSCR1O15162 318 aa20.88■□□□□ 0.93
SDK1-205ENST00000467827 RNMTO43148 476 aaKnown RBP20.88■□□□□ 0.93
SDK1-205ENST00000467827 ADRA2BP18089 450 aa20.88■□□□□ 0.93
SDK1-205ENST00000467827 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
SDK1-205ENST00000467827 RIPK4P57078 832 aa20.87■□□□□ 0.93
SDK1-205ENST00000467827 TEFQ10587 303 aa20.87■□□□□ 0.93
SDK1-205ENST00000467827 SMARCC1Q92922 1105 aaPredicted RBP20.87■□□□□ 0.93
SDK1-205ENST00000467827 HMGB2P26583 209 aaKnown RBP20.86■□□□□ 0.93
SDK1-205ENST00000467827 TMPOP42166 694 aaKnown RBP20.86■□□□□ 0.93
SDK1-205ENST00000467827 LGR6Q9HBX8 967 aa20.86■□□□□ 0.93
SDK1-205ENST00000467827 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
SDK1-205ENST00000467827 PTF1AQ7RTS3 328 aa20.85■□□□□ 0.93
SDK1-205ENST00000467827 NFATC2IPQ8NCF5 419 aa20.85■□□□□ 0.93
SDK1-205ENST00000467827 PIGBQ92521 554 aa20.85■□□□□ 0.93
SDK1-205ENST00000467827 KAT6BQ8WYB5 2073 aa20.84■□□□□ 0.93
SDK1-205ENST00000467827 EN1Q05925 392 aaPredicted RBP20.84■□□□□ 0.93
SDK1-205ENST00000467827 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
SDK1-205ENST00000467827 DEFB132Q7Z7B7 95 aa20.84■□□□□ 0.93
SDK1-205ENST00000467827 IL17REQ8NFR9 667 aa20.84■□□□□ 0.93
SDK1-205ENST00000467827 SLC52A2Q9HAB3 445 aa20.84■□□□□ 0.93
SDK1-205ENST00000467827 KDM6AO15550 1401 aaPredicted RBP20.82■□□□□ 0.92
SDK1-205ENST00000467827 APAF1O14727 1248 aa20.82■□□□□ 0.92
SDK1-205ENST00000467827 MCM10Q7L590 875 aa20.81■□□□□ 0.92
SDK1-205ENST00000467827 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
SDK1-205ENST00000467827 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
SDK1-205ENST00000467827 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
SDK1-205ENST00000467827 EZH2Q15910 746 aaKnown RBP20.79■□□□□ 0.92
SDK1-205ENST00000467827 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
SDK1-205ENST00000467827 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
SDK1-205ENST00000467827 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
SDK1-205ENST00000467827 TXNRD1Q16881 649 aa20.78■□□□□ 0.92
SDK1-205ENST00000467827 SLC27A3Q5K4L6 730 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms