RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 PRDM15P57071 1507 aaPredicted RBP6.96□□□□□ -1.29
RIF1-209ENST00000467762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.96□□□□□ -1.29
RIF1-209ENST00000467762 PLCH2O75038 1416 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 ST20-MTHFSA0A0A6YYL1 179 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 NR1I2O75469 434 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 GCGRP47871 477 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 CCDC184Q52MB2 194 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 EFCAB2Q5VUJ9 269 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
RIF1-209ENST00000467762 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 PPEF1O14829 653 aaPredicted RBP6.95□□□□□ -1.3
RIF1-209ENST00000467762 ADH1BP00325 375 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 CD46P15529 392 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 GGCXP38435 758 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 ZNF326Q5BKZ1 582 aaKnown RBP6.95□□□□□ -1.3
RIF1-209ENST00000467762 MORN1Q5T089 497 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 SCUBE3Q8IX30 993 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 SERPINA10Q9UK55 444 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 WDR7Q9Y4E6 1490 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 PARD3Q8TEW0 1356 aa6.95□□□□□ -1.3
RIF1-209ENST00000467762 KIAA1210Q9ULL0 1709 aa6.94□□□□□ -1.3
RIF1-209ENST00000467762 TRIM66O15016 1216 aa6.94□□□□□ -1.3
RIF1-209ENST00000467762 TMF1P82094 1093 aa6.94□□□□□ -1.3
RIF1-209ENST00000467762 EMID1Q96A84 441 aaPredicted RBP6.94□□□□□ -1.3
RIF1-209ENST00000467762 ZNF428Q96B54 188 aa6.94□□□□□ -1.3
RIF1-209ENST00000467762 SYCP2Q9BX26 1530 aa6.94□□□□□ -1.3
RIF1-209ENST00000467762 COL17A1Q9UMD9 1497 aaPredicted RBP6.93□□□□□ -1.3
RIF1-209ENST00000467762 NGEFQ8N5V2 710 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 DDRGK1Q96HY6 314 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 TMUB1Q9BVT8 246 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 USP35Q9P2H5 1018 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 TTC37Q6PGP7 1564 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 RNF17Q9BXT8 1623 aaKnown RBP6.93□□□□□ -1.3
RIF1-209ENST00000467762 SCAPERQ9BY12 1400 aa6.93□□□□□ -1.3
RIF1-209ENST00000467762 PER1O15534 1290 aaPredicted RBP6.92□□□□□ -1.3
RIF1-209ENST00000467762 ATP6V1AP38606 617 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 CCDC136Q96JN2 1154 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
RIF1-209ENST00000467762 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 SLC27A5Q9Y2P5 690 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 V9GY48 417 aaPredicted RBP6.92□□□□□ -1.3
RIF1-209ENST00000467762 NPC1L1Q9UHC9 1359 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 A2MP01023 1474 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 PLA2R1Q13018 1463 aa6.92□□□□□ -1.3
RIF1-209ENST00000467762 ABCC1P33527 1531 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 ZCCHC11Q5TAX3 1644 aaKnown RBP6.91□□□□□ -1.3
RIF1-209ENST00000467762 CEP152O94986 1710 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 HLA-CQ95604 372 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 SPSB2Q99619 263 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 SLC6A16Q9GZN6 736 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 EIF3AQ14152 1382 aaKnown RBP6.91□□□□□ -1.3
RIF1-209ENST00000467762 KANK1Q14678 1352 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 PTPRTO14522 1441 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 TRPM2O94759 1503 aa6.91□□□□□ -1.3
RIF1-209ENST00000467762 DEPDC5O75140 1603 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 TET3O43151 1660 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 PATL2C9JE40 543 aaKnown RBP6.9□□□□□ -1.3
RIF1-209ENST00000467762 TCERG1O14776 1098 aaKnown RBP6.9□□□□□ -1.3
RIF1-209ENST00000467762 MS4A1P11836 297 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 PLA2G2CQ5R387 149 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 ANKLE1Q8NAG6 615 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
RIF1-209ENST00000467762 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
RIF1-209ENST00000467762 CLASP1Q7Z460 1538 aa6.9□□□□□ -1.31
RIF1-209ENST00000467762 IQGAP1P46940 1657 aa6.9□□□□□ -1.31
RIF1-209ENST00000467762 SPHKAPQ2M3C7 1700 aa6.9□□□□□ -1.31
RIF1-209ENST00000467762 CLCN1P35523 988 aa6.89□□□□□ -1.31
RIF1-209ENST00000467762 IRX6P78412 446 aaPredicted RBP6.89□□□□□ -1.31
RIF1-209ENST00000467762 RETREG2Q8NC44 543 aa6.89□□□□□ -1.31
RIF1-209ENST00000467762 TESK2Q96S53 571 aa6.89□□□□□ -1.31
RIF1-209ENST00000467762 RCAN3Q9UKA8 241 aa6.89□□□□□ -1.31
RIF1-209ENST00000467762 BLMP54132 1417 aaPredicted RBP6.89□□□□□ -1.31
RIF1-209ENST00000467762 SYNMO15061 1565 aa6.88□□□□□ -1.31
RIF1-209ENST00000467762 SCAF11Q99590 1463 aaKnown RBP6.88□□□□□ -1.31
RIF1-209ENST00000467762 SPAG9O60271 1321 aaKnown RBP6.88□□□□□ -1.31
RIF1-209ENST00000467762 KDM4AO75164 1064 aa6.88□□□□□ -1.31
RIF1-209ENST00000467762 ANP32AP39687 249 aaKnown RBP6.88□□□□□ -1.31
RIF1-209ENST00000467762 RRP1P56182 461 aaKnown RBP6.88□□□□□ -1.31
RIF1-209ENST00000467762 PDE4CQ08493 712 aa6.88□□□□□ -1.31
RIF1-209ENST00000467762 B4GALNT3Q6L9W6 998 aa6.88□□□□□ -1.31
RIF1-209ENST00000467762 LIAT1Q6ZQX7 453 aa6.88□□□□□ -1.31
RIF1-209ENST00000467762 FAM160A2Q8N612 972 aaPredicted RBP6.88□□□□□ -1.31
RIF1-209ENST00000467762 MADDQ8WXG6 1647 aa6.87□□□□□ -1.31
RIF1-209ENST00000467762 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
RIF1-209ENST00000467762 GFRA3O60609 400 aa6.87□□□□□ -1.31
RIF1-209ENST00000467762 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
RIF1-209ENST00000467762 SLC19A1P41440 591 aa6.87□□□□□ -1.31
RIF1-209ENST00000467762 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
RIF1-209ENST00000467762 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.87□□□□□ -1.31
RIF1-209ENST00000467762 KNSTRNQ9Y448 316 aa6.87□□□□□ -1.31
RIF1-209ENST00000467762 LCE2BO14633 110 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 HOXA2O43364 376 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 GUCA2AQ02747 115 aa6.86□□□□□ -1.31
RIF1-209ENST00000467762 RGL3Q3MIN7 710 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms