RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 CPDO75976 1380 aa24.21■■□□□ 1.47
CHRNA4-203ENST00000467563 KIAA0232Q92628 1395 aa24.21■■□□□ 1.47
CHRNA4-203ENST00000467563 CAMTA1Q9Y6Y1 1673 aa24.2■■□□□ 1.47
CHRNA4-203ENST00000467563 CHL1O00533 1208 aa24.2■■□□□ 1.47
CHRNA4-203ENST00000467563 CHRNA2Q15822 529 aa24.2■■□□□ 1.47
CHRNA4-203ENST00000467563 SMC4Q9NTJ3 1288 aa24.2■■□□□ 1.47
CHRNA4-203ENST00000467563 GNAT3A8MTJ3 354 aa24.2■■□□□ 1.46
CHRNA4-203ENST00000467563 HTATSF1O43719 755 aaKnown RBP24.2■■□□□ 1.46
CHRNA4-203ENST00000467563 MAP3K5Q99683 1374 aa24.19■■□□□ 1.46
CHRNA4-203ENST00000467563 VAMP4O75379 141 aa24.19■■□□□ 1.46
CHRNA4-203ENST00000467563 PANK1Q8TE04 598 aa24.19■■□□□ 1.46
CHRNA4-203ENST00000467563 C8orf58Q8NAV2 365 aa24.18■■□□□ 1.46
CHRNA4-203ENST00000467563 TNNQ9UQP3 1299 aa24.18■■□□□ 1.46
CHRNA4-203ENST00000467563 ABCC6O95255 1503 aa24.17■■□□□ 1.46
CHRNA4-203ENST00000467563 LMO7Q8WWI1 1683 aa24.17■■□□□ 1.46
CHRNA4-203ENST00000467563 ELL2O00472 640 aaPredicted RBP24.17■■□□□ 1.46
CHRNA4-203ENST00000467563 ALDH1L2Q3SY69 923 aa24.16■■□□□ 1.46
CHRNA4-203ENST00000467563 ZNF428Q96B54 188 aa24.16■■□□□ 1.46
CHRNA4-203ENST00000467563 IL17REQ8NFR9 667 aa24.15■■□□□ 1.46
CHRNA4-203ENST00000467563 LRRC37A3O60309 1634 aa24.15■■□□□ 1.46
CHRNA4-203ENST00000467563 RLBP1P12271 317 aa24.15■■□□□ 1.46
CHRNA4-203ENST00000467563 TWISTNBQ3B726 338 aaPredicted RBP24.15■■□□□ 1.46
CHRNA4-203ENST00000467563 MIS18AQ9NYP9 233 aa24.14■■□□□ 1.46
CHRNA4-203ENST00000467563 ZKSCAN2Q63HK3 967 aa24.13■■□□□ 1.45
CHRNA4-203ENST00000467563 NLRP2Q9NX02 1062 aa24.13■■□□□ 1.45
CHRNA4-203ENST00000467563 COG6Q9Y2V7 657 aa24.13■■□□□ 1.45
CHRNA4-203ENST00000467563 ROBO1Q9Y6N7 1651 aa24.13■■□□□ 1.45
CHRNA4-203ENST00000467563 KRT24Q2M2I5 525 aa24.12■■□□□ 1.45
CHRNA4-203ENST00000467563 PLEKHO1Q53GL0 409 aaPredicted RBP24.12■■□□□ 1.45
CHRNA4-203ENST00000467563 CLUAP1Q96AJ1 413 aa24.12■■□□□ 1.45
CHRNA4-203ENST00000467563 ABCA3Q99758 1704 aa24.12■■□□□ 1.45
CHRNA4-203ENST00000467563 AMOTQ4VCS5 1084 aa24.11■■□□□ 1.45
CHRNA4-203ENST00000467563 PRDM11Q9NQV5 511 aa24.11■■□□□ 1.45
CHRNA4-203ENST00000467563 NOB1Q9ULX3 412 aaKnown RBP24.11■■□□□ 1.45
CHRNA4-203ENST00000467563 BRPF1P55201 1214 aaPredicted RBP24.11■■□□□ 1.45
CHRNA4-203ENST00000467563 CSB-PGBD3P0DP91 1061 aa24.1■■□□□ 1.45
CHRNA4-203ENST00000467563 TRIM27P14373 513 aa24.1■■□□□ 1.45
CHRNA4-203ENST00000467563 HAP1P54257 671 aaPredicted RBP24.1■■□□□ 1.45
CHRNA4-203ENST00000467563 ZNF530Q6P9A1 599 aaPredicted RBP24.1■■□□□ 1.45
CHRNA4-203ENST00000467563 TSPYL4Q9UJ04 414 aa24.1■■□□□ 1.45
CHRNA4-203ENST00000467563 FAM208AQ9UK61 1670 aaKnown RBP24.1■■□□□ 1.45
CHRNA4-203ENST00000467563 KIF16BQ96L93 1317 aa24.09■■□□□ 1.45
CHRNA4-203ENST00000467563 CEMIPQ8WUJ3 1361 aa24.09■■□□□ 1.45
CHRNA4-203ENST00000467563 AKAP4Q5JQC9 854 aa24.08■■□□□ 1.45
CHRNA4-203ENST00000467563 ATF7IPQ6VMQ6 1270 aa24.08■■□□□ 1.45
CHRNA4-203ENST00000467563 MRPL50Q8N5N7 158 aaKnown RBP24.08■■□□□ 1.45
CHRNA4-203ENST00000467563 DZIP1LQ8IYY4 767 aaKnown RBP24.07■■□□□ 1.44
CHRNA4-203ENST00000467563 TCERG1O14776 1098 aaKnown RBP24.07■■□□□ 1.44
CHRNA4-203ENST00000467563 LGR6Q9HBX8 967 aa24.07■■□□□ 1.44
CHRNA4-203ENST00000467563 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
CHRNA4-203ENST00000467563 TAF7Q15545 349 aaPredicted RBP24.05■■□□□ 1.44
CHRNA4-203ENST00000467563 FTSJ3Q8IY81 847 aaKnown RBP24.05■■□□□ 1.44
CHRNA4-203ENST00000467563 RAPGEF4Q8WZA2 1011 aa24.05■■□□□ 1.44
CHRNA4-203ENST00000467563 IPO8O15397 1037 aaKnown RBP24.04■■□□□ 1.44
CHRNA4-203ENST00000467563 MEGF6O75095 1541 aa24.04■■□□□ 1.44
CHRNA4-203ENST00000467563 MS4A1P11836 297 aa24.04■■□□□ 1.44
CHRNA4-203ENST00000467563 C1orf141Q5JVX7 400 aa24.03■■□□□ 1.44
CHRNA4-203ENST00000467563 MPRIPQ6WCQ1 1025 aa24.03■■□□□ 1.44
CHRNA4-203ENST00000467563 MVPQ14764 893 aaKnown RBP24.03■■□□□ 1.44
CHRNA4-203ENST00000467563 BABAM1Q9NWV8 329 aa24.03■■□□□ 1.44
CHRNA4-203ENST00000467563 COL5A2P05997 1499 aaPredicted RBP24.02■■□□□ 1.44
CHRNA4-203ENST00000467563 WDR17Q8IZU2 1322 aa24.02■■□□□ 1.44
CHRNA4-203ENST00000467563 TATP17735 454 aaPredicted RBP24.01■■□□□ 1.43
CHRNA4-203ENST00000467563 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
CHRNA4-203ENST00000467563 KDM2BQ8NHM5 1336 aa24■■□□□ 1.43
CHRNA4-203ENST00000467563 ARHGAP45Q92619 1136 aa23.99■■□□□ 1.43
CHRNA4-203ENST00000467563 TMEM57Q8N5G2 664 aa23.98■■□□□ 1.43
CHRNA4-203ENST00000467563 TSHZ2Q9NRE2 1034 aa23.98■■□□□ 1.43
CHRNA4-203ENST00000467563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.98■■□□□ 1.43
CHRNA4-203ENST00000467563 OVOS2A0A0G2JMS6 1433 aa23.97■■□□□ 1.43
CHRNA4-203ENST00000467563 TOM1L2Q6ZVM7 507 aa23.97■■□□□ 1.43
CHRNA4-203ENST00000467563 PLEKHG2Q9H7P9 1386 aa23.96■■□□□ 1.43
CHRNA4-203ENST00000467563 TEFQ10587 303 aa23.96■■□□□ 1.43
CHRNA4-203ENST00000467563 AAMPQ13685 434 aa23.96■■□□□ 1.43
CHRNA4-203ENST00000467563 SPG7Q9UQ90 795 aa23.96■■□□□ 1.43
CHRNA4-203ENST00000467563 ITPRIPQ8IWB1 547 aa23.96■■□□□ 1.43
CHRNA4-203ENST00000467563 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.42
CHRNA4-203ENST00000467563 CENPQQ7L2Z9 268 aaPredicted RBP23.95■■□□□ 1.42
CHRNA4-203ENST00000467563 ADAMTS7Q9UKP4 1686 aa23.94■■□□□ 1.42
CHRNA4-203ENST00000467563 PHKG2P15735 406 aa23.94■■□□□ 1.42
CHRNA4-203ENST00000467563 STRN4Q9NRL3 753 aa23.94■■□□□ 1.42
CHRNA4-203ENST00000467563 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
CHRNA4-203ENST00000467563 TOM1O60784 492 aa23.93■■□□□ 1.42
CHRNA4-203ENST00000467563 LARP1Q6PKG0 1096 aaKnown RBP23.93■■□□□ 1.42
CHRNA4-203ENST00000467563 DDX19BQ9UMR2 479 aa23.93■■□□□ 1.42
CHRNA4-203ENST00000467563 PIP4K2BP78356 416 aa23.93■■□□□ 1.42
CHRNA4-203ENST00000467563 PCDHB15Q9Y5E8 787 aa23.93■■□□□ 1.42
CHRNA4-203ENST00000467563 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 BTBD11A6QL63 1104 aa23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 PKD1L3Q7Z443 1732 aa23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 CARD10Q9BWT7 1032 aa23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 ABCC4O15439 1325 aa23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 KDM6AO15550 1401 aaPredicted RBP23.92■■□□□ 1.42
CHRNA4-203ENST00000467563 CYP27B1O15528 508 aa23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 KCNQ3O43525 872 aa23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 IGHDP01880 384 aa23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 EVA1CP58658 441 aa23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 PHLPP1O60346 1717 aa23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms