RNA–Protein interactions for RNA: ENST00000467463.1

PLXNA3-202, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 384 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-202ENST00000467463 PLSCR1O15162 318 aa13.62□□□□□ -0.23
PLXNA3-202ENST00000467463 DDX54Q8TDD1 881 aaKnown RBP13.62□□□□□ -0.23
PLXNA3-202ENST00000467463 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
PLXNA3-202ENST00000467463 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
PLXNA3-202ENST00000467463 FAM208AQ9UK61 1670 aaKnown RBP13.61□□□□□ -0.23
PLXNA3-202ENST00000467463 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
PLXNA3-202ENST00000467463 KNSTRNQ9Y448 316 aa13.61□□□□□ -0.23
PLXNA3-202ENST00000467463 SBF2Q86WG5 1849 aa13.61□□□□□ -0.23
PLXNA3-202ENST00000467463 SMG6Q86US8 1419 aaKnown RBP13.61□□□□□ -0.23
PLXNA3-202ENST00000467463 MEGF6O75095 1541 aa13.6□□□□□ -0.23
PLXNA3-202ENST00000467463 ZBTB7AO95365 584 aa13.6□□□□□ -0.23
PLXNA3-202ENST00000467463 MORC1Q86VD1 984 aa13.6□□□□□ -0.23
PLXNA3-202ENST00000467463 PROM2Q8N271 834 aa13.6□□□□□ -0.23
PLXNA3-202ENST00000467463 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
PLXNA3-202ENST00000467463 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
PLXNA3-202ENST00000467463 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
PLXNA3-202ENST00000467463 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
PLXNA3-202ENST00000467463 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
PLXNA3-202ENST00000467463 NSD2O96028 1365 aa13.58□□□□□ -0.23
PLXNA3-202ENST00000467463 CEP350Q5VT06 3117 aa13.58□□□□□ -0.24
PLXNA3-202ENST00000467463 MAP2P11137 1827 aaKnown RBP13.58□□□□□ -0.24
PLXNA3-202ENST00000467463 EYA1Q99502 592 aa13.58□□□□□ -0.24
PLXNA3-202ENST00000467463 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
PLXNA3-202ENST00000467463 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
PLXNA3-202ENST00000467463 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
PLXNA3-202ENST00000467463 FHDC1Q9C0D6 1143 aaPredicted RBP13.56□□□□□ -0.24
PLXNA3-202ENST00000467463 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
PLXNA3-202ENST00000467463 PTGER2P43116 358 aa13.55□□□□□ -0.24
PLXNA3-202ENST00000467463 TXNRD1Q16881 649 aa13.55□□□□□ -0.24
PLXNA3-202ENST00000467463 SYT17Q9BSW7 474 aa13.55□□□□□ -0.24
PLXNA3-202ENST00000467463 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
PLXNA3-202ENST00000467463 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
PLXNA3-202ENST00000467463 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
PLXNA3-202ENST00000467463 GIGYF1O75420 1035 aaPredicted RBP13.54□□□□□ -0.24
PLXNA3-202ENST00000467463 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
PLXNA3-202ENST00000467463 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
PLXNA3-202ENST00000467463 CYP27B1O15528 508 aa13.53□□□□□ -0.24
PLXNA3-202ENST00000467463 SYTL4Q96C24 671 aaPredicted RBP13.53□□□□□ -0.24
PLXNA3-202ENST00000467463 NHSQ6T4R5 1651 aa13.53□□□□□ -0.24
PLXNA3-202ENST00000467463 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
PLXNA3-202ENST00000467463 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.25
PLXNA3-202ENST00000467463 IGSF1Q8N6C5 1336 aa13.51□□□□□ -0.25
PLXNA3-202ENST00000467463 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
PLXNA3-202ENST00000467463 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
PLXNA3-202ENST00000467463 CNGB1Q14028 1251 aaPredicted RBP13.51□□□□□ -0.25
PLXNA3-202ENST00000467463 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
PLXNA3-202ENST00000467463 BTAF1O14981 1849 aa13.49□□□□□ -0.25
PLXNA3-202ENST00000467463 IL13P35225 146 aa13.49□□□□□ -0.25
PLXNA3-202ENST00000467463 MTHFSP49914 203 aa13.49□□□□□ -0.25
PLXNA3-202ENST00000467463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
PLXNA3-202ENST00000467463 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
PLXNA3-202ENST00000467463 KCNQ4P56696 695 aa13.48□□□□□ -0.25
PLXNA3-202ENST00000467463 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
PLXNA3-202ENST00000467463 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
PLXNA3-202ENST00000467463 STK32BQ9NY57 414 aa13.48□□□□□ -0.25
PLXNA3-202ENST00000467463 GPR162Q16538 588 aa13.47□□□□□ -0.25
PLXNA3-202ENST00000467463 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
PLXNA3-202ENST00000467463 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
PLXNA3-202ENST00000467463 NPC1L1Q9UHC9 1359 aa13.46□□□□□ -0.25
PLXNA3-202ENST00000467463 PHKG2P15735 406 aa13.46□□□□□ -0.25
PLXNA3-202ENST00000467463 SULT6B1Q6IMI4 303 aa13.46□□□□□ -0.25
PLXNA3-202ENST00000467463 MPRIPQ6WCQ1 1025 aa13.46□□□□□ -0.25
PLXNA3-202ENST00000467463 PKD1L3Q7Z443 1732 aa13.45□□□□□ -0.26
PLXNA3-202ENST00000467463 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
PLXNA3-202ENST00000467463 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
PLXNA3-202ENST00000467463 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
PLXNA3-202ENST00000467463 MTFR1LQ9H019 292 aa13.45□□□□□ -0.26
PLXNA3-202ENST00000467463 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
PLXNA3-202ENST00000467463 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
PLXNA3-202ENST00000467463 PIGBQ92521 554 aa13.44□□□□□ -0.26
PLXNA3-202ENST00000467463 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
PLXNA3-202ENST00000467463 ARXQ96QS3 562 aa13.44□□□□□ -0.26
PLXNA3-202ENST00000467463 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
PLXNA3-202ENST00000467463 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
PLXNA3-202ENST00000467463 GOLGB1Q14789 3259 aaKnown RBP13.43□□□□□ -0.26
PLXNA3-202ENST00000467463 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
PLXNA3-202ENST00000467463 ZNF530Q6P9A1 599 aaPredicted RBP13.42□□□□□ -0.26
PLXNA3-202ENST00000467463 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
PLXNA3-202ENST00000467463 KDRP35968 1356 aa13.42□□□□□ -0.26
PLXNA3-202ENST00000467463 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
PLXNA3-202ENST00000467463 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
PLXNA3-202ENST00000467463 HMOX1P09601 288 aa13.41□□□□□ -0.26
PLXNA3-202ENST00000467463 AMOTQ4VCS5 1084 aa13.41□□□□□ -0.26
PLXNA3-202ENST00000467463 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
PLXNA3-202ENST00000467463 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
PLXNA3-202ENST00000467463 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
PLXNA3-202ENST00000467463 PALLDQ8WX93 1383 aa13.4□□□□□ -0.26
PLXNA3-202ENST00000467463 SMARCC1Q92922 1105 aaPredicted RBP13.39□□□□□ -0.27
PLXNA3-202ENST00000467463 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
PLXNA3-202ENST00000467463 ITGB4P16144 1822 aa13.39□□□□□ -0.27
PLXNA3-202ENST00000467463 LY75O60449 1722 aa13.39□□□□□ -0.27
PLXNA3-202ENST00000467463 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
PLXNA3-202ENST00000467463 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
PLXNA3-202ENST00000467463 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
PLXNA3-202ENST00000467463 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
PLXNA3-202ENST00000467463 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
PLXNA3-202ENST00000467463 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
PLXNA3-202ENST00000467463 TFCP2L1Q9NZI6 479 aa13.38□□□□□ -0.27
PLXNA3-202ENST00000467463 COL3A1P02461 1466 aaPredicted RBP13.37□□□□□ -0.27
PLXNA3-202ENST00000467463 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms