RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
CDCA7-206ENST00000467411 VAMP4O75379 141 aa13.19□□□□□ -0.3
CDCA7-206ENST00000467411 MAP3K5Q99683 1374 aa13.19□□□□□ -0.3
CDCA7-206ENST00000467411 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
CDCA7-206ENST00000467411 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
CDCA7-206ENST00000467411 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
CDCA7-206ENST00000467411 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
CDCA7-206ENST00000467411 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
CDCA7-206ENST00000467411 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
CDCA7-206ENST00000467411 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
CDCA7-206ENST00000467411 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
CDCA7-206ENST00000467411 MRC1P22897 1456 aa13.17□□□□□ -0.3
CDCA7-206ENST00000467411 FAM83GA6ND36 823 aa13.16□□□□□ -0.3
CDCA7-206ENST00000467411 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
CDCA7-206ENST00000467411 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
CDCA7-206ENST00000467411 ERBB3P21860 1342 aa13.16□□□□□ -0.3
CDCA7-206ENST00000467411 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
CDCA7-206ENST00000467411 MS4A1P11836 297 aa13.16□□□□□ -0.3
CDCA7-206ENST00000467411 MRPL50Q8N5N7 158 aaKnown RBP13.15□□□□□ -0.3
CDCA7-206ENST00000467411 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
CDCA7-206ENST00000467411 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
CDCA7-206ENST00000467411 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
CDCA7-206ENST00000467411 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
CDCA7-206ENST00000467411 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
CDCA7-206ENST00000467411 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
CDCA7-206ENST00000467411 SOX12O15370 315 aa13.14□□□□□ -0.31
CDCA7-206ENST00000467411 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
CDCA7-206ENST00000467411 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
CDCA7-206ENST00000467411 RGS12O14924 1447 aa13.14□□□□□ -0.31
CDCA7-206ENST00000467411 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
CDCA7-206ENST00000467411 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
CDCA7-206ENST00000467411 RLBP1P12271 317 aa13.13□□□□□ -0.31
CDCA7-206ENST00000467411 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
CDCA7-206ENST00000467411 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
CDCA7-206ENST00000467411 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
CDCA7-206ENST00000467411 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
CDCA7-206ENST00000467411 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
CDCA7-206ENST00000467411 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
CDCA7-206ENST00000467411 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
CDCA7-206ENST00000467411 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
CDCA7-206ENST00000467411 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
CDCA7-206ENST00000467411 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
CDCA7-206ENST00000467411 MCM10Q7L590 875 aa13.12□□□□□ -0.31
CDCA7-206ENST00000467411 ABCC4O15439 1325 aa13.12□□□□□ -0.31
CDCA7-206ENST00000467411 TRIM27P14373 513 aa13.11□□□□□ -0.31
CDCA7-206ENST00000467411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.315e-7■■■■□ 19.4
CDCA7-206ENST00000467411 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
CDCA7-206ENST00000467411 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
CDCA7-206ENST00000467411 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
CDCA7-206ENST00000467411 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
CDCA7-206ENST00000467411 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
CDCA7-206ENST00000467411 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
CDCA7-206ENST00000467411 DZIP1LQ8IYY4 767 aaKnown RBP13.1□□□□□ -0.31
CDCA7-206ENST00000467411 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
CDCA7-206ENST00000467411 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
CDCA7-206ENST00000467411 IPO8O15397 1037 aaKnown RBP13.1□□□□□ -0.31
CDCA7-206ENST00000467411 GLI3P10071 1580 aa13.1□□□□□ -0.31
CDCA7-206ENST00000467411 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
CDCA7-206ENST00000467411 MEGF6O75095 1541 aa13.09□□□□□ -0.31
CDCA7-206ENST00000467411 UBR2Q8IWV8 1755 aa13.09□□□□□ -0.31
CDCA7-206ENST00000467411 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
CDCA7-206ENST00000467411 NRAPQ86VF7 1730 aa13.09□□□□□ -0.31
CDCA7-206ENST00000467411 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
CDCA7-206ENST00000467411 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
CDCA7-206ENST00000467411 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
CDCA7-206ENST00000467411 LRRC59Q96AG4 307 aaKnown RBP13.08□□□□□ -0.32
CDCA7-206ENST00000467411 PHLPP1O60346 1717 aa13.08□□□□□ -0.32
CDCA7-206ENST00000467411 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
CDCA7-206ENST00000467411 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
CDCA7-206ENST00000467411 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
CDCA7-206ENST00000467411 HOXB7P09629 217 aa13.06□□□□□ -0.32
CDCA7-206ENST00000467411 BCL2L13Q9BXK5 485 aa13.06□□□□□ -0.32
CDCA7-206ENST00000467411 DDX19BQ9UMR2 479 aa13.06□□□□□ -0.32
CDCA7-206ENST00000467411 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
CDCA7-206ENST00000467411 PTPRCP08575 1304 aa13.06□□□□□ -0.32
CDCA7-206ENST00000467411 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
CDCA7-206ENST00000467411 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
CDCA7-206ENST00000467411 C5P01031 1676 aa13.05□□□□□ -0.32
CDCA7-206ENST00000467411 ZBTB40Q9NUA8 1239 aa13.05□□□□□ -0.32
CDCA7-206ENST00000467411 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
CDCA7-206ENST00000467411 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
CDCA7-206ENST00000467411 NWD2Q9ULI1 1742 aa13.05□□□□□ -0.32
CDCA7-206ENST00000467411 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
CDCA7-206ENST00000467411 WDR17Q8IZU2 1322 aa13.05□□□□□ -0.32
CDCA7-206ENST00000467411 LRP6O75581 1613 aa13.04□□□□□ -0.32
CDCA7-206ENST00000467411 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
CDCA7-206ENST00000467411 HDAC1Q13547 482 aaPredicted RBP13.04□□□□□ -0.32
CDCA7-206ENST00000467411 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
CDCA7-206ENST00000467411 IBTKQ9P2D0 1353 aaPredicted RBP13.04□□□□□ -0.32
CDCA7-206ENST00000467411 ZC3H6P61129 1189 aaKnown RBP13.04□□□□□ -0.32
CDCA7-206ENST00000467411 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
CDCA7-206ENST00000467411 IGHDP01880 384 aa13.03□□□□□ -0.32
CDCA7-206ENST00000467411 TMEM57Q8N5G2 664 aa13.03□□□□□ -0.32
CDCA7-206ENST00000467411 API5Q9BZZ5 524 aaKnown RBP13.03□□□□□ -0.32
CDCA7-206ENST00000467411 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
CDCA7-206ENST00000467411 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
CDCA7-206ENST00000467411 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
CDCA7-206ENST00000467411 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.32
CDCA7-206ENST00000467411 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.33
CDCA7-206ENST00000467411 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms