RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 HSP90AB3PQ58FF7 597 aa9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 PDILTQ8N807 584 aa9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 ZSWIM4Q9H7M6 989 aa9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
SPTBN1-204ENST00000467371 JDP2Q8WYK2 163 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 SYNRGQ9UMZ2 1314 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 CFTRP13569 1480 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 BIVM-ERCC5R4GMW8 1640 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 RRAGDQ9NQL2 400 aaPredicted RBP9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 TCEAL9Q9UHQ7 104 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 MFSD10Q14728 455 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 METTL16Q86W50 562 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 DRC7Q8IY82 874 aa9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 MRPL42Q9Y6G3 142 aaKnown RBP9.49□□□□□ -0.89
SPTBN1-204ENST00000467371 LDHCP07864 332 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 CDC5LQ99459 802 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 FANCD2Q9BXW9 1451 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 MTUS2Q5JR59 1369 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 PHLDB1Q86UU1 1377 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 ATP2B1P20020 1258 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 CALD1Q05682 793 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 NBPF5PQ86XG9 351 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 IFRD1O00458 451 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 PPP1R37O75864 691 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 CT47B1P0C2W7 299 aaPredicted RBP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 C1QTNF12Q5T7M4 302 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 LSM14AQ8ND56 463 aaKnown RBP9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 RSPH1Q8WYR4 309 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 GMLQ99445 158 aa9.48□□□□□ -0.89
SPTBN1-204ENST00000467371 AMPD3Q01432 767 aa9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 MRPL58Q14197 206 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 CCSAPQ6IQ19 270 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.47□□□□□ -0.895e-12■■■□□ 17.3
SPTBN1-204ENST00000467371 ABCF2Q9UG63 623 aa9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 ZBED9Q6R2W3 1325 aa9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 LDHAP00338 332 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 KCTD2Q14681 263 aa9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 CC2D1BQ5T0F9 858 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
SPTBN1-204ENST00000467371 RGL3Q3MIN7 710 aa9.46□□□□□ -0.89
SPTBN1-204ENST00000467371 ABL2P42684 1182 aa9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 ZNF513Q8N8E2 541 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 CWC25Q9NXE8 425 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 AKAP2Q9Y2D5 859 aa9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 IGHDP01880 384 aa9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 RFC5P40937 340 aa9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 PMFBP1Q8TBY8 1022 aa9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 MFRPQ9BY79 579 aa9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 THRAP3Q9Y2W1 955 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-204ENST00000467371 CC2D2AQ9P2K1 1620 aa9.45□□□□□ -0.9
SPTBN1-204ENST00000467371 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
SPTBN1-204ENST00000467371 RETREG1Q9H6L5 497 aa9.45□□□□□ -0.9
SPTBN1-204ENST00000467371 KAT6BQ8WYB5 2073 aa9.45□□□□□ -0.9
SPTBN1-204ENST00000467371 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
SPTBN1-204ENST00000467371 RUNDC1Q96C34 613 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 SEZ6LQ9BYH1 1024 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 SSUH2Q9Y2M2 353 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 PDE6BP35913 854 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 CHST12Q9NRB3 414 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 TMEM51Q9NW97 253 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 GNALP38405 381 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 MYCBPQ99417 103 aaPredicted RBP9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
SPTBN1-204ENST00000467371 SETD1BQ9UPS6 1966 aaKnown RBP9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 LRRC27Q9C0I9 530 aa9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 ENPP3O14638 875 aa9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 CLCN1P35523 988 aa9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 ZRSR2Q15696 482 aaKnown RBP9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 APBA2Q99767 749 aa9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 TYW1Q9NV66 732 aaKnown RBP9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 SIM2Q14190 667 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-204ENST00000467371 FECHP22830 423 aa9.42□□□□□ -0.9
SPTBN1-204ENST00000467371 VPS72Q15906 364 aa9.42□□□□□ -0.9
SPTBN1-204ENST00000467371 ZSCAN30Q86W11 494 aa9.42□□□□□ -0.9
SPTBN1-204ENST00000467371 OSBPL2Q9H1P3 480 aa9.42□□□□□ -0.9
SPTBN1-204ENST00000467371 ERICH3Q5RHP9 1530 aa9.42□□□□□ -0.9
SPTBN1-204ENST00000467371 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
SPTBN1-204ENST00000467371 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 SOCS7O14512 581 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 ZKSCAN8Q15776 578 aaPredicted RBP9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 TSC1Q92574 1164 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 RELTQ969Z4 430 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 BORCS6Q96GS4 357 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 DNAJC6O75061 913 aa9.41□□□□□ -0.9
SPTBN1-204ENST00000467371 PDE4AP27815 886 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms