RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 ARHGEF28Q8N1W1 1705 aaKnown RBP10.36□□□□□ -0.75
SND1-205ENST00000467238 ABCA3Q99758 1704 aa10.36□□□□□ -0.75
SND1-205ENST00000467238 PROX2Q3B8N5 592 aa10.35□□□□□ -0.75
SND1-205ENST00000467238 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
SND1-205ENST00000467238 ANKK1Q8NFD2 765 aa10.35□□□□□ -0.75
SND1-205ENST00000467238 PRAM1Q96QH2 718 aa10.34□□□□□ -0.75
SND1-205ENST00000467238 USP21Q9UK80 565 aa10.34□□□□□ -0.75
SND1-205ENST00000467238 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
SND1-205ENST00000467238 ATRNO75882 1429 aa10.33□□□□□ -0.76
SND1-205ENST00000467238 LAPTM4AQ15012 233 aa10.33□□□□□ -0.76
SND1-205ENST00000467238 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
SND1-205ENST00000467238 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
SND1-205ENST00000467238 TRPC5Q9UL62 973 aaPredicted RBP10.33□□□□□ -0.76
SND1-205ENST00000467238 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
SND1-205ENST00000467238 NWD2Q9ULI1 1742 aa10.33□□□□□ -0.76
SND1-205ENST00000467238 BCL9LQ86UU0 1499 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 SOWAHBA6NEL2 793 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 GFRA3O60609 400 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 SAFB2Q14151 953 aaKnown RBP eCLIP10.32□□□□□ -0.76
SND1-205ENST00000467238 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 BRWD3Q6RI45 1802 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 KIAA1210Q9ULL0 1709 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 TNS3Q68CZ2 1445 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
SND1-205ENST00000467238 PLCH1Q4KWH8 1693 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 ALS2Q96Q42 1657 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 COL9A1P20849 921 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 KCNC4Q03721 635 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 KRT28Q7Z3Y7 464 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 DCAF11Q8TEB1 546 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
SND1-205ENST00000467238 POGKQ9P215 609 aa10.31□□□□□ -0.76
SND1-205ENST00000467238 SLIT2O94813 1529 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 TULP4Q9NRJ4 1543 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 EVI5O60447 810 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 CRYBG1Q9Y4K1 1723 aa10.3□□□□□ -0.76
SND1-205ENST00000467238 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
SND1-205ENST00000467238 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
SND1-205ENST00000467238 GLI3P10071 1580 aa10.29□□□□□ -0.76
SND1-205ENST00000467238 PSME1Q06323 249 aa10.28□□□□□ -0.76
SND1-205ENST00000467238 ARHGEF10O15013 1369 aa10.27□□□□□ -0.76
SND1-205ENST00000467238 EIF3AQ14152 1382 aaKnown RBP10.27□□□□□ -0.76
SND1-205ENST00000467238 ATAD2Q6PL18 1390 aa10.27□□□□□ -0.76
SND1-205ENST00000467238 NRAPQ86VF7 1730 aa10.27□□□□□ -0.76
SND1-205ENST00000467238 NYAP1Q6ZVC0 841 aa10.27□□□□□ -0.77
SND1-205ENST00000467238 PMFBP1Q8TBY8 1022 aa10.27□□□□□ -0.77
SND1-205ENST00000467238 HIRIP3Q9BW71 556 aaPredicted RBP10.27□□□□□ -0.77
SND1-205ENST00000467238 TOPAZ1Q8N9V7 1692 aa10.27□□□□□ -0.77
SND1-205ENST00000467238 MINK1Q8N4C8 1332 aaPredicted RBP10.27□□□□□ -0.77
SND1-205ENST00000467238 PRR36Q9H6K5 1346 aa10.27□□□□□ -0.77
SND1-205ENST00000467238 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
SND1-205ENST00000467238 WASLO00401 505 aaPredicted RBP10.26□□□□□ -0.77
SND1-205ENST00000467238 UNC5CLQ8IV45 518 aa10.26□□□□□ -0.77
SND1-205ENST00000467238 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
SND1-205ENST00000467238 ZFRQ96KR1 1074 aaKnown RBP10.26□□□□□ -0.77
SND1-205ENST00000467238 ATP7BP35670 1465 aa10.25□□□□□ -0.77
SND1-205ENST00000467238 LAPTM4BQ86VI4 370 aa10.25□□□□□ -0.77
SND1-205ENST00000467238 CABLES1Q8TDN4 633 aa10.25□□□□□ -0.77
SND1-205ENST00000467238 COL14A1Q05707 1796 aaKnown RBP10.24□□□□□ -0.77
SND1-205ENST00000467238 LMOD2Q6P5Q4 547 aa10.24□□□□□ -0.77
SND1-205ENST00000467238 PCDHGA10Q9Y5H3 936 aa10.24□□□□□ -0.77
SND1-205ENST00000467238 GPRASP1Q5JY77 1395 aa10.24□□□□□ -0.77
SND1-205ENST00000467238 PHRF1Q9P1Y6 1649 aaKnown RBP10.23□□□□□ -0.77
SND1-205ENST00000467238 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
SND1-205ENST00000467238 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
SND1-205ENST00000467238 KIAA1468Q9P260 1216 aa10.23□□□□□ -0.77
SND1-205ENST00000467238 QRICH2Q9H0J4 1663 aa10.22□□□□□ -0.77
SND1-205ENST00000467238 VPS72Q15906 364 aa10.22□□□□□ -0.77
SND1-205ENST00000467238 PAXIP1Q6ZW49 1069 aaPredicted RBP10.21□□□□□ -0.77
SND1-205ENST00000467238 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
SND1-205ENST00000467238 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
SND1-205ENST00000467238 NUDT16Q96DE0 195 aaKnown RBP10.21□□□□□ -0.77
SND1-205ENST00000467238 SEPT9Q9UHD8 586 aaPredicted RBP10.21□□□□□ -0.77
SND1-205ENST00000467238 FAM83GA6ND36 823 aa10.2□□□□□ -0.78
SND1-205ENST00000467238 NRG2O14511 850 aaPredicted RBP10.2□□□□□ -0.78
SND1-205ENST00000467238 NBPF1Q3BBV0 1214 aa10.2□□□□□ -0.78
SND1-205ENST00000467238 TRPM1Q7Z4N2 1603 aa10.2□□□□□ -0.78
SND1-205ENST00000467238 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
SND1-205ENST00000467238 POLR3AO14802 1390 aaPredicted RBP10.19□□□□□ -0.78
SND1-205ENST00000467238 ONECUT3O60422 494 aaPredicted RBP10.18□□□□□ -0.78
SND1-205ENST00000467238 CCDC125Q86Z20 511 aa10.18□□□□□ -0.78
SND1-205ENST00000467238 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
SND1-205ENST00000467238 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
SND1-205ENST00000467238 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
SND1-205ENST00000467238 ZNF775Q96BV0 537 aaPredicted RBP10.17□□□□□ -0.78
SND1-205ENST00000467238 BTG4Q9NY30 223 aa10.17□□□□□ -0.78
SND1-205ENST00000467238 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
SND1-205ENST00000467238 THSD7AQ9UPZ6 1657 aa10.17□□□□□ -0.78
SND1-205ENST00000467238 NRKQ7Z2Y5 1582 aa10.17□□□□□ -0.78
SND1-205ENST00000467238 BLMP54132 1417 aaPredicted RBP10.16□□□□□ -0.78
SND1-205ENST00000467238 ACEP12821 1306 aa10.16□□□□□ -0.78
SND1-205ENST00000467238 CENPJQ9HC77 1338 aaPredicted RBP10.16□□□□□ -0.78
SND1-205ENST00000467238 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
SND1-205ENST00000467238 ZNF787Q6DD87 383 aa10.16□□□□□ -0.78
SND1-205ENST00000467238 L3MBTL2Q969R5 705 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms