RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
SFXN3-204ENST00000466982 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
SFXN3-204ENST00000466982 ZNF518AQ6AHZ1 1483 aa13.41□□□□□ -0.26
SFXN3-204ENST00000466982 ZBTB7BO15156 539 aaPredicted RBP13.41□□□□□ -0.26
SFXN3-204ENST00000466982 PHF14O94880 888 aa13.41□□□□□ -0.26
SFXN3-204ENST00000466982 CT47B1P0C2W7 299 aaPredicted RBP13.41□□□□□ -0.26
SFXN3-204ENST00000466982 C16orf71Q8IYS4 520 aaPredicted RBP13.41□□□□□ -0.26
SFXN3-204ENST00000466982 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
SFXN3-204ENST00000466982 TMPOP42166 694 aaKnown RBP13.41□□□□□ -0.26
SFXN3-204ENST00000466982 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
SFXN3-204ENST00000466982 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
SFXN3-204ENST00000466982 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
SFXN3-204ENST00000466982 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
SFXN3-204ENST00000466982 KIF13AQ9H1H9 1805 aa13.4□□□□□ -0.26
SFXN3-204ENST00000466982 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
SFXN3-204ENST00000466982 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
SFXN3-204ENST00000466982 EFCC1Q9HA90 598 aa13.4□□□□□ -0.26
SFXN3-204ENST00000466982 CWC22Q9HCG8 908 aaKnown RBP13.4□□□□□ -0.26
SFXN3-204ENST00000466982 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
SFXN3-204ENST00000466982 NEO1Q92859 1461 aa13.39□□□□□ -0.27
SFXN3-204ENST00000466982 LOC102724159A0A0B4J2E5 919 aa13.39□□□□□ -0.27
SFXN3-204ENST00000466982 PWP2Q15269 919 aaKnown RBP13.39□□□□□ -0.27
SFXN3-204ENST00000466982 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
SFXN3-204ENST00000466982 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-204ENST00000466982 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
SFXN3-204ENST00000466982 MCCP23508 829 aa13.38□□□□□ -0.27
SFXN3-204ENST00000466982 GABPB1Q06547 395 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-204ENST00000466982 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-204ENST00000466982 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.38□□□□□ -0.27
SFXN3-204ENST00000466982 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
SFXN3-204ENST00000466982 FKBP5Q13451 457 aaPredicted RBP13.37□□□□□ -0.27
SFXN3-204ENST00000466982 PTPRTO14522 1441 aa13.37□□□□□ -0.27
SFXN3-204ENST00000466982 RIOK3O14730 519 aaKnown RBP13.37□□□□□ -0.27
SFXN3-204ENST00000466982 ADCY5O95622 1261 aa13.37□□□□□ -0.27
SFXN3-204ENST00000466982 PLEKHF1Q96S99 279 aa13.37□□□□□ -0.27
SFXN3-204ENST00000466982 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
SFXN3-204ENST00000466982 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
SFXN3-204ENST00000466982 ST18O60284 1047 aa13.36□□□□□ -0.27
SFXN3-204ENST00000466982 MBD3O95983 291 aa13.36□□□□□ -0.27
SFXN3-204ENST00000466982 NOL8Q76FK4 1167 aaKnown RBP13.36□□□□□ -0.27
SFXN3-204ENST00000466982 EGFL6Q8IUX8 553 aa13.36□□□□□ -0.27
SFXN3-204ENST00000466982 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
SFXN3-204ENST00000466982 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
SFXN3-204ENST00000466982 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
SFXN3-204ENST00000466982 MAST1Q9Y2H9 1570 aa13.35□□□□□ -0.27
SFXN3-204ENST00000466982 DUOX2Q9NRD8 1548 aa13.35□□□□□ -0.27
SFXN3-204ENST00000466982 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
SFXN3-204ENST00000466982 ELL2O00472 640 aaPredicted RBP13.35□□□□□ -0.27
SFXN3-204ENST00000466982 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
SFXN3-204ENST00000466982 SPTLC3Q9NUV7 552 aa13.35□□□□□ -0.27
SFXN3-204ENST00000466982 ABCC11Q96J66 1382 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 APBB1O00213 710 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 SLFN14P0C7P3 912 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 MLECQ14165 292 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 TTC22Q5TAA0 569 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 EP400NLQ6ZTU2 488 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 PYCARDQ9ULZ3 195 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
SFXN3-204ENST00000466982 CALCOCO1Q9P1Z2 691 aa13.34□□□□□ -0.27
SFXN3-204ENST00000466982 TMX3Q96JJ7 454 aa13.33□□□□□ -0.27
SFXN3-204ENST00000466982 FEZ1Q99689 392 aa13.33□□□□□ -0.27
SFXN3-204ENST00000466982 SDSP20132 328 aa13.33□□□□□ -0.28
SFXN3-204ENST00000466982 CEP120Q8N960 986 aa13.33□□□□□ -0.28
SFXN3-204ENST00000466982 ANKRD7Q92527 254 aa13.33□□□□□ -0.28
SFXN3-204ENST00000466982 BRD1O95696 1058 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 NEK4P51957 841 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 TSPYL6Q8N831 410 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
SFXN3-204ENST00000466982 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 CLTCL1P53675 1640 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 AP5Z1O43299 807 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
SFXN3-204ENST00000466982 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
SFXN3-204ENST00000466982 KCNF1Q9H3M0 494 aa13.32□□□□□ -0.28
SFXN3-204ENST00000466982 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
SFXN3-204ENST00000466982 OGFRQ9NZT2 677 aa13.31□□□□□ -0.28
SFXN3-204ENST00000466982 FEZ2Q9UHY8 353 aaPredicted RBP13.31□□□□□ -0.28
SFXN3-204ENST00000466982 ALDH1L2Q3SY69 923 aa13.31□□□□□ -0.28
SFXN3-204ENST00000466982 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
SFXN3-204ENST00000466982 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
SFXN3-204ENST00000466982 MED14O60244 1454 aa13.3□□□□□ -0.28
SFXN3-204ENST00000466982 ATP7AQ04656 1500 aa13.3□□□□□ -0.28
SFXN3-204ENST00000466982 SPC24Q8NBT2 197 aa13.3□□□□□ -0.28
SFXN3-204ENST00000466982 ZFYVE16Q7Z3T8 1539 aa13.3□□□□□ -0.28
SFXN3-204ENST00000466982 MRPL50Q8N5N7 158 aaKnown RBP13.29□□□□□ -0.28
SFXN3-204ENST00000466982 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
SFXN3-204ENST00000466982 MYCBPQ99417 103 aaPredicted RBP13.29□□□□□ -0.28
SFXN3-204ENST00000466982 TCHHQ07283 1943 aa13.29□□□□□ -0.28
SFXN3-204ENST00000466982 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
SFXN3-204ENST00000466982 CTIFO43310 598 aaKnown RBP13.28□□□□□ -0.28
SFXN3-204ENST00000466982 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
SFXN3-204ENST00000466982 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
SFXN3-204ENST00000466982 VAMP4O75379 141 aa13.28□□□□□ -0.28
SFXN3-204ENST00000466982 BRPF1P55201 1214 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms