RNA–Protein interactions for RNA: ENST00000466793.1

SMPDL3B-204, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 3

Gene SMPDL3B, Length 726 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-204ENST00000466793 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.37
SMPDL3B-204ENST00000466793 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
SMPDL3B-204ENST00000466793 TRIM26Q12899 539 aaPredicted RBP17.33■□□□□ 0.36
SMPDL3B-204ENST00000466793 LY75O60449 1722 aa17.33■□□□□ 0.36
SMPDL3B-204ENST00000466793 COG3Q96JB2 828 aa17.32■□□□□ 0.36
SMPDL3B-204ENST00000466793 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
SMPDL3B-204ENST00000466793 STK32BQ9NY57 414 aa17.31■□□□□ 0.36
SMPDL3B-204ENST00000466793 CYP27B1O15528 508 aa17.3■□□□□ 0.36
SMPDL3B-204ENST00000466793 YY1P25490 414 aa17.29■□□□□ 0.36
SMPDL3B-204ENST00000466793 AMPHP49418 695 aa17.29■□□□□ 0.36
SMPDL3B-204ENST00000466793 ZCRB1Q8TBF4 217 aaKnown RBP17.28■□□□□ 0.36
SMPDL3B-204ENST00000466793 MTFR1LQ9H019 292 aa17.28■□□□□ 0.36
SMPDL3B-204ENST00000466793 PPP1R1BQ9UD71 204 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3B-204ENST00000466793 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
SMPDL3B-204ENST00000466793 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.36
SMPDL3B-204ENST00000466793 NCAPD2Q15021 1401 aa17.27■□□□□ 0.35
SMPDL3B-204ENST00000466793 NLGN2Q8NFZ4 835 aa17.26■□□□□ 0.35
SMPDL3B-204ENST00000466793 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
SMPDL3B-204ENST00000466793 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
SMPDL3B-204ENST00000466793 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
SMPDL3B-204ENST00000466793 INSRP06213 1382 aa17.25■□□□□ 0.35
SMPDL3B-204ENST00000466793 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
SMPDL3B-204ENST00000466793 TMF1P82094 1093 aa17.24■□□□□ 0.35
SMPDL3B-204ENST00000466793 ANKRD26Q9UPS8 1709 aa17.24■□□□□ 0.35
SMPDL3B-204ENST00000466793 RTL1A6NKG5 1358 aa17.23■□□□□ 0.35
SMPDL3B-204ENST00000466793 ARXQ96QS3 562 aa17.22■□□□□ 0.35
SMPDL3B-204ENST00000466793 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
SMPDL3B-204ENST00000466793 ITGB4P16144 1822 aa17.21■□□□□ 0.35
SMPDL3B-204ENST00000466793 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
SMPDL3B-204ENST00000466793 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
SMPDL3B-204ENST00000466793 TAF1LQ8IZX4 1826 aa17.2■□□□□ 0.34
SMPDL3B-204ENST00000466793 ZNF784Q8NCA9 323 aaPredicted RBP17.2■□□□□ 0.34
SMPDL3B-204ENST00000466793 EYA1Q99502 592 aa17.2■□□□□ 0.34
SMPDL3B-204ENST00000466793 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMPDL3B-204ENST00000466793 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
SMPDL3B-204ENST00000466793 GOLGB1Q14789 3259 aaKnown RBP17.19■□□□□ 0.34
SMPDL3B-204ENST00000466793 FLT4P35916 1363 aa17.18■□□□□ 0.34
SMPDL3B-204ENST00000466793 SLC27A3Q5K4L6 730 aa17.18■□□□□ 0.34
SMPDL3B-204ENST00000466793 PIGBQ92521 554 aa17.18■□□□□ 0.34
SMPDL3B-204ENST00000466793 SLC4A9Q96Q91 983 aa17.18■□□□□ 0.34
SMPDL3B-204ENST00000466793 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
SMPDL3B-204ENST00000466793 CCNL1Q9UK58 526 aaPredicted RBP17.18■□□□□ 0.34
SMPDL3B-204ENST00000466793 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
SMPDL3B-204ENST00000466793 C5P01031 1676 aa17.16■□□□□ 0.34
SMPDL3B-204ENST00000466793 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
SMPDL3B-204ENST00000466793 ITPK1Q13572 414 aa17.16■□□□□ 0.34
SMPDL3B-204ENST00000466793 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
SMPDL3B-204ENST00000466793 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
SMPDL3B-204ENST00000466793 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
SMPDL3B-204ENST00000466793 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
SMPDL3B-204ENST00000466793 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
SMPDL3B-204ENST00000466793 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
SMPDL3B-204ENST00000466793 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
SMPDL3B-204ENST00000466793 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
SMPDL3B-204ENST00000466793 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
SMPDL3B-204ENST00000466793 PALLDQ8WX93 1383 aa17.14■□□□□ 0.33
SMPDL3B-204ENST00000466793 TATP17735 454 aaPredicted RBP17.13■□□□□ 0.33
SMPDL3B-204ENST00000466793 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
SMPDL3B-204ENST00000466793 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
SMPDL3B-204ENST00000466793 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
SMPDL3B-204ENST00000466793 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
SMPDL3B-204ENST00000466793 PANK3Q9H999 370 aa17.1■□□□□ 0.33
SMPDL3B-204ENST00000466793 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
SMPDL3B-204ENST00000466793 PHKG2P15735 406 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 SLC16A10Q8TF71 515 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 PCDH11XQ9BZA7 1347 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 PCDH11YQ9BZA8 1340 aa17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
SMPDL3B-204ENST00000466793 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
SMPDL3B-204ENST00000466793 POLR3GLQ9BT43 218 aa17.08■□□□□ 0.32
SMPDL3B-204ENST00000466793 CHD4Q14839 1912 aa17.07■□□□□ 0.32
SMPDL3B-204ENST00000466793 KDRP35968 1356 aa17.06■□□□□ 0.32
SMPDL3B-204ENST00000466793 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
SMPDL3B-204ENST00000466793 KIAA1551Q9HCM1 1747 aa17.06■□□□□ 0.32
SMPDL3B-204ENST00000466793 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
SMPDL3B-204ENST00000466793 PHF14O94880 888 aa17.04■□□□□ 0.32
SMPDL3B-204ENST00000466793 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
SMPDL3B-204ENST00000466793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
SMPDL3B-204ENST00000466793 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
SMPDL3B-204ENST00000466793 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
SMPDL3B-204ENST00000466793 SIK1P57059 783 aa17.03■□□□□ 0.32
SMPDL3B-204ENST00000466793 GPR162Q16538 588 aa17.03■□□□□ 0.32
SMPDL3B-204ENST00000466793 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.32
SMPDL3B-204ENST00000466793 MSH5O43196 834 aa17.02■□□□□ 0.32
SMPDL3B-204ENST00000466793 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
SMPDL3B-204ENST00000466793 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
SMPDL3B-204ENST00000466793 PELP1Q8IZL8 1130 aaKnown RBP17.01■□□□□ 0.31
SMPDL3B-204ENST00000466793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
SMPDL3B-204ENST00000466793 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
SMPDL3B-204ENST00000466793 IL13P35225 146 aa16.99■□□□□ 0.31
SMPDL3B-204ENST00000466793 ADAMTS7Q9UKP4 1686 aa16.99■□□□□ 0.31
SMPDL3B-204ENST00000466793 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
SMPDL3B-204ENST00000466793 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
SMPDL3B-204ENST00000466793 POLD1P28340 1107 aa16.98■□□□□ 0.31
SMPDL3B-204ENST00000466793 KIF7Q2M1P5 1343 aa16.97■□□□□ 0.31
SMPDL3B-204ENST00000466793 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMPDL3B-204ENST00000466793 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms