RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.04
PSMB4-202ENST00000466425 CRISPLD2Q9H0B8 497 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 PLEKHH1Q9ULM0 1364 aa8.57□□□□□ -1.04
PSMB4-202ENST00000466425 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
PSMB4-202ENST00000466425 FAM135BQ49AJ0 1406 aa8.56□□□□□ -1.04
PSMB4-202ENST00000466425 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
PSMB4-202ENST00000466425 CCDC27Q2M243 656 aa8.56□□□□□ -1.04
PSMB4-202ENST00000466425 WDR63Q8IWG1 891 aa8.56□□□□□ -1.04
PSMB4-202ENST00000466425 ZNF775Q96BV0 537 aaPredicted RBP8.56□□□□□ -1.04
PSMB4-202ENST00000466425 A0A1W2PP64 1363 aa8.56□□□□□ -1.04
PSMB4-202ENST00000466425 TBC1D12O60347 775 aa8.55□□□□□ -1.04
PSMB4-202ENST00000466425 TNNT2P45379 298 aaPredicted RBP8.55□□□□□ -1.04
PSMB4-202ENST00000466425 CCDC146Q8IYE0 955 aa8.55□□□□□ -1.04
PSMB4-202ENST00000466425 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
PSMB4-202ENST00000466425 EID1Q9Y6B2 187 aa8.55□□□□□ -1.04
PSMB4-202ENST00000466425 TMEM2Q9UHN6 1383 aa8.55□□□□□ -1.04
PSMB4-202ENST00000466425 NLRP1Q9C000 1473 aa8.55□□□□□ -1.04
PSMB4-202ENST00000466425 ARHGEF28Q8N1W1 1705 aaKnown RBP8.54□□□□□ -1.04
PSMB4-202ENST00000466425 NKTRP30414 1462 aaKnown RBP8.54□□□□□ -1.04
PSMB4-202ENST00000466425 WASLO00401 505 aaPredicted RBP8.54□□□□□ -1.04
PSMB4-202ENST00000466425 SLC34A2O95436 690 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 AAMPQ13685 434 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 DMRTA1Q5VZB9 504 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 ZNF787Q6DD87 383 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 EXOC6Q8TAG9 804 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 MYH16Q9H6N6 1097 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 TECPR2O15040 1411 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 FANCIQ9NVI1 1328 aa8.54□□□□□ -1.04
PSMB4-202ENST00000466425 ATP7BP35670 1465 aa8.53□□□□□ -1.04
PSMB4-202ENST00000466425 TCERG1O14776 1098 aaKnown RBP8.53□□□□□ -1.04
PSMB4-202ENST00000466425 FYB1O15117 783 aa8.53□□□□□ -1.04
PSMB4-202ENST00000466425 NEFMP07197 916 aa8.53□□□□□ -1.04
PSMB4-202ENST00000466425 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
PSMB4-202ENST00000466425 U2AF1L5P0DN76 240 aaPredicted RBP8.53□□□□□ -1.04
PSMB4-202ENST00000466425 U2AF1Q01081 240 aaKnown RBP eCLIP8.53□□□□□ -1.047e-7■■■■□ 21.2
PSMB4-202ENST00000466425 WWC1Q8IX03 1113 aa8.53□□□□□ -1.04
PSMB4-202ENST00000466425 CABP1Q9NZU7 370 aa8.53□□□□□ -1.04
PSMB4-202ENST00000466425 PLEKHG1Q9ULL1 1385 aa8.52□□□□□ -1.05
PSMB4-202ENST00000466425 MS4A1P11836 297 aa8.52□□□□□ -1.05
PSMB4-202ENST00000466425 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
PSMB4-202ENST00000466425 TCP11L2Q8N4U5 519 aa8.52□□□□□ -1.05
PSMB4-202ENST00000466425 MAPK8IP3Q9UPT6 1336 aa8.52□□□□□ -1.05
PSMB4-202ENST00000466425 DIAPH1O60610 1272 aaKnown RBP8.51□□□□□ -1.05
PSMB4-202ENST00000466425 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
PSMB4-202ENST00000466425 WAPLQ7Z5K2 1190 aa8.51□□□□□ -1.05
PSMB4-202ENST00000466425 THEMISQ8N1K5 641 aaPredicted RBP8.51□□□□□ -1.05
PSMB4-202ENST00000466425 GGNBP2Q9H3C7 697 aa8.51□□□□□ -1.05
PSMB4-202ENST00000466425 EDC4Q6P2E9 1401 aaKnown RBP8.51□□□□□ -1.05
PSMB4-202ENST00000466425 IL16Q14005 1332 aa8.51□□□□□ -1.05
PSMB4-202ENST00000466425 METP08581 1390 aa8.5□□□□□ -1.05
PSMB4-202ENST00000466425 GFRA3O60609 400 aa8.5□□□□□ -1.05
PSMB4-202ENST00000466425 PSEN2P49810 448 aa8.5□□□□□ -1.05
PSMB4-202ENST00000466425 PTCD2Q8WV60 388 aaKnown RBP8.5□□□□□ -1.05
PSMB4-202ENST00000466425 CRBNQ96SW2 442 aa8.5□□□□□ -1.05
PSMB4-202ENST00000466425 PNPLA6Q8IY17 1366 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 LOC100996750A0A140TA64 210 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
PSMB4-202ENST00000466425 PLIN1O60240 522 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 FCHSD2O94868 740 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 CANXP27824 592 aaKnown RBP8.49□□□□□ -1.05
PSMB4-202ENST00000466425 CALD1Q05682 793 aaKnown RBP8.49□□□□□ -1.05
PSMB4-202ENST00000466425 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
PSMB4-202ENST00000466425 TXNDC2Q86VQ3 553 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
PSMB4-202ENST00000466425 KRTAP4-6Q9BYQ5 205 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 TBX22Q9Y458 520 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 CD163L1Q9NR16 1453 aa8.49□□□□□ -1.05
PSMB4-202ENST00000466425 AATKQ6ZMQ8 1374 aa8.48□□□□□ -1.05
PSMB4-202ENST00000466425 CPSF1Q10570 1443 aaKnown RBP8.48□□□□□ -1.05
PSMB4-202ENST00000466425 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
PSMB4-202ENST00000466425 COG3Q96JB2 828 aa8.48□□□□□ -1.05
PSMB4-202ENST00000466425 WDR70Q9NW82 654 aa8.48□□□□□ -1.05
PSMB4-202ENST00000466425 IQSEC2Q5JU85 1478 aa8.48□□□□□ -1.05
PSMB4-202ENST00000466425 PPIP5K1Q6PFW1 1433 aa8.47□□□□□ -1.05
PSMB4-202ENST00000466425 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
PSMB4-202ENST00000466425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
PSMB4-202ENST00000466425 CPS1P31327 1500 aa8.47□□□□□ -1.05
PSMB4-202ENST00000466425 SLIT1O75093 1534 aa8.46□□□□□ -1.05
PSMB4-202ENST00000466425 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.06
PSMB4-202ENST00000466425 ANP32AP39687 249 aaKnown RBP8.46□□□□□ -1.06
PSMB4-202ENST00000466425 TMPOP42166 694 aaKnown RBP8.46□□□□□ -1.06
PSMB4-202ENST00000466425 LMOD3Q0VAK6 560 aa8.46□□□□□ -1.06
PSMB4-202ENST00000466425 MFSD10Q14728 455 aa8.46□□□□□ -1.06
PSMB4-202ENST00000466425 OXER1Q8TDS5 423 aa8.46□□□□□ -1.06
PSMB4-202ENST00000466425 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
PSMB4-202ENST00000466425 ADAMTS13Q76LX8 1427 aa8.46□□□□□ -1.06
PSMB4-202ENST00000466425 CDC42BPGQ6DT37 1551 aa8.45□□□□□ -1.06
PSMB4-202ENST00000466425 LTKP29376 864 aa8.45□□□□□ -1.06
PSMB4-202ENST00000466425 RARSP54136 660 aaKnown RBP8.45□□□□□ -1.06
PSMB4-202ENST00000466425 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
PSMB4-202ENST00000466425 POLKQ9UBT6 870 aa8.45□□□□□ -1.06
PSMB4-202ENST00000466425 RRP7AQ9Y3A4 280 aaKnown RBP8.45□□□□□ -1.06
PSMB4-202ENST00000466425 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
PSMB4-202ENST00000466425 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
PSMB4-202ENST00000466425 ARHGAP23Q9P227 1491 aa8.45□□□□□ -1.06
PSMB4-202ENST00000466425 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
PSMB4-202ENST00000466425 HSPA2P54652 639 aa8.44□□□□□ -1.06
PSMB4-202ENST00000466425 C20orf194Q5TEA3 1177 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms