RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 J3QL48 77 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 NDUFV2P19404 249 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 ABCC1P33527 1531 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 SKOR1P84550 965 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
NCL-208ENST00000466274 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
NCL-208ENST00000466274 SRCAPQ6ZRS2 3230 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 JCADQ9P266 1359 aa9.69□□□□□ -0.86
NCL-208ENST00000466274 SUPT6HQ7KZ85 1726 aaKnown RBP9.68□□□□□ -0.86
NCL-208ENST00000466274 NLRP1Q9C000 1473 aa9.68□□□□□ -0.86
NCL-208ENST00000466274 MIA2Q96PC5 1412 aa9.68□□□□□ -0.86
NCL-208ENST00000466274 C6orf229H3BNL8 230 aa9.68□□□□□ -0.86
NCL-208ENST00000466274 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
NCL-208ENST00000466274 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
NCL-208ENST00000466274 RETREG3Q86VR2 466 aa9.68□□□□□ -0.86
NCL-208ENST00000466274 SYNMO15061 1565 aa9.67□□□□□ -0.86
NCL-208ENST00000466274 SPATA31A6Q5VVP1 1343 aa9.67□□□□□ -0.86
NCL-208ENST00000466274 HNRNPMP52272 730 aaKnown RBP eCLIP9.67□□□□□ -0.86
NCL-208ENST00000466274 GMPR2Q9P2T1 348 aaKnown RBP9.67□□□□□ -0.86
NCL-208ENST00000466274 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
NCL-208ENST00000466274 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
NCL-208ENST00000466274 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
NCL-208ENST00000466274 CTC1Q2NKJ3 1217 aa9.66□□□□□ -0.86
NCL-208ENST00000466274 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
NCL-208ENST00000466274 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
NCL-208ENST00000466274 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
NCL-208ENST00000466274 KIDINS220Q9ULH0 1771 aa9.65□□□□□ -0.86
NCL-208ENST00000466274 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
NCL-208ENST00000466274 AMHR2Q16671 573 aa9.65□□□□□ -0.86
NCL-208ENST00000466274 GIGYF2Q6Y7W6 1299 aaKnown RBP9.65□□□□□ -0.86
NCL-208ENST00000466274 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
NCL-208ENST00000466274 SAMD9LQ8IVG5 1584 aa9.64□□□□□ -0.87
NCL-208ENST00000466274 WNT7BP56706 349 aa9.64□□□□□ -0.87
NCL-208ENST00000466274 POLR1AO95602 1720 aaPredicted RBP9.64□□□□□ -0.87
NCL-208ENST00000466274 PZPP20742 1482 aa9.64□□□□□ -0.87
NCL-208ENST00000466274 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
NCL-208ENST00000466274 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
NCL-208ENST00000466274 HPS1Q92902 700 aa9.63□□□□□ -0.87
NCL-208ENST00000466274 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
NCL-208ENST00000466274 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
NCL-208ENST00000466274 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
NCL-208ENST00000466274 CDK12Q9NYV4 1490 aaPredicted RBP9.63□□□□□ -0.87
NCL-208ENST00000466274 KIAA1107Q9UPP5 1409 aa9.63□□□□□ -0.87
NCL-208ENST00000466274 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
NCL-208ENST00000466274 KIF3BO15066 747 aa9.62□□□□□ -0.87
NCL-208ENST00000466274 MS4A1P11836 297 aa9.62□□□□□ -0.87
NCL-208ENST00000466274 SLAIN2Q9P270 581 aa9.62□□□□□ -0.87
NCL-208ENST00000466274 NUTM2BA6NNL0 878 aaPredicted RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 NUTM2EB1AL46 878 aaPredicted RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 TXNDC2Q86VQ3 553 aa9.61□□□□□ -0.87
NCL-208ENST00000466274 PROSER2Q86WR7 435 aaPredicted RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 CFDP1Q9UEE9 299 aaPredicted RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 PLXNC1O60486 1568 aa9.61□□□□□ -0.87
NCL-208ENST00000466274 TMEM94Q12767 1356 aa9.61□□□□□ -0.87
NCL-208ENST00000466274 DHX29Q7Z478 1369 aaKnown RBP9.61□□□□□ -0.87
NCL-208ENST00000466274 ATP7AQ04656 1500 aa9.61□□□□□ -0.87
NCL-208ENST00000466274 ALDH1A1P00352 501 aa9.6□□□□□ -0.87
NCL-208ENST00000466274 KCNA6P17658 529 aa9.6□□□□□ -0.87
NCL-208ENST00000466274 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
NCL-208ENST00000466274 IQGAP1P46940 1657 aa9.6□□□□□ -0.87
NCL-208ENST00000466274 ITSN2Q9NZM3 1697 aa9.6□□□□□ -0.87
NCL-208ENST00000466274 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 TRIM66O15016 1216 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 CCNYL3P0C7X3 344 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 TREML4Q6UXN2 200 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 PARP9Q8IXQ6 854 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 TBC1D2Q9BYX2 928 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 ATP13A2Q9NQ11 1180 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 MSH6P52701 1360 aa9.59□□□□□ -0.87
NCL-208ENST00000466274 EEA1Q15075 1411 aa9.58□□□□□ -0.88
NCL-208ENST00000466274 PREX2Q70Z35 1606 aa9.58□□□□□ -0.88
NCL-208ENST00000466274 RBM6P78332 1123 aaKnown RBP9.58□□□□□ -0.88
NCL-208ENST00000466274 SCAF11Q99590 1463 aaKnown RBP9.58□□□□□ -0.88
NCL-208ENST00000466274 SYCP2Q9BX26 1530 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 SIAH2O43255 324 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 SH3BP2P78314 561 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 MTMR2Q13614 643 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 PTPRNQ16849 979 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 CCDC125Q86Z20 511 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 PCDHB15Q9Y5E8 787 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
NCL-208ENST00000466274 SNRPBP14678 240 aaKnown RBP9.56□□□□□ -0.88
NCL-208ENST00000466274 LTKP29376 864 aa9.56□□□□□ -0.88
NCL-208ENST00000466274 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
NCL-208ENST00000466274 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
NCL-208ENST00000466274 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
NCL-208ENST00000466274 RTEL1-TNFRSF6BF6WH68 1400 aa9.56□□□□□ -0.88
NCL-208ENST00000466274 UBTFP17480 764 aaKnown RBP9.55□□□□□ -0.88
NCL-208ENST00000466274 KCNH2Q12809 1159 aa9.55□□□□□ -0.88
NCL-208ENST00000466274 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
NCL-208ENST00000466274 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
NCL-208ENST00000466274 BAP1Q92560 729 aa9.55□□□□□ -0.88
NCL-208ENST00000466274 AK7Q96M32 723 aa9.55□□□□□ -0.88
NCL-208ENST00000466274 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms