RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
RTFDC1-205ENST00000466260 MORC1Q86VD1 984 aa13.32□□□□□ -0.28
RTFDC1-205ENST00000466260 CCDC125Q86Z20 511 aa13.32□□□□□ -0.28
RTFDC1-205ENST00000466260 NSD2O96028 1365 aa13.32□□□□□ -0.28
RTFDC1-205ENST00000466260 DOT1LQ8TEK3 1739 aa13.31□□□□□ -0.28
RTFDC1-205ENST00000466260 BAG6P46379 1132 aa13.31□□□□□ -0.28
RTFDC1-205ENST00000466260 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-205ENST00000466260 CDCA7Q9BWT1 371 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-205ENST00000466260 INSRP06213 1382 aa13.31□□□□□ -0.28
RTFDC1-205ENST00000466260 MEGF6O75095 1541 aa13.3□□□□□ -0.28
RTFDC1-205ENST00000466260 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-205ENST00000466260 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-205ENST00000466260 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
RTFDC1-205ENST00000466260 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
RTFDC1-205ENST00000466260 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
RTFDC1-205ENST00000466260 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
RTFDC1-205ENST00000466260 KIF24Q5T7B8 1368 aa13.29□□□□□ -0.28
RTFDC1-205ENST00000466260 RREB1Q92766 1687 aa13.28□□□□□ -0.28
RTFDC1-205ENST00000466260 APBA3O96018 575 aa13.28□□□□□ -0.28
RTFDC1-205ENST00000466260 ACSBG1Q96GR2 724 aa13.28□□□□□ -0.28
RTFDC1-205ENST00000466260 BTAF1O14981 1849 aa13.27□□□□□ -0.28
RTFDC1-205ENST00000466260 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
RTFDC1-205ENST00000466260 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
RTFDC1-205ENST00000466260 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
RTFDC1-205ENST00000466260 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
RTFDC1-205ENST00000466260 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
RTFDC1-205ENST00000466260 PKD1L3Q7Z443 1732 aa13.26□□□□□ -0.29
RTFDC1-205ENST00000466260 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
RTFDC1-205ENST00000466260 TATP17735 454 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-205ENST00000466260 PTF1AQ7RTS3 328 aa13.25□□□□□ -0.29
RTFDC1-205ENST00000466260 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-205ENST00000466260 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-205ENST00000466260 RGPD3A6NKT7 1758 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-205ENST00000466260 RGPD4Q7Z3J3 1758 aa13.23□□□□□ -0.29
RTFDC1-205ENST00000466260 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-205ENST00000466260 EYA1Q99502 592 aa13.23□□□□□ -0.29
RTFDC1-205ENST00000466260 ITGB4P16144 1822 aa13.23□□□□□ -0.29
RTFDC1-205ENST00000466260 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
RTFDC1-205ENST00000466260 KCNQ2O43526 872 aa13.22□□□□□ -0.29
RTFDC1-205ENST00000466260 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-205ENST00000466260 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
RTFDC1-205ENST00000466260 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-205ENST00000466260 MTHFSP49914 203 aa13.2□□□□□ -0.3
RTFDC1-205ENST00000466260 POLA2Q14181 598 aa13.2□□□□□ -0.3
RTFDC1-205ENST00000466260 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
RTFDC1-205ENST00000466260 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
RTFDC1-205ENST00000466260 ABCB7O75027 752 aa13.19□□□□□ -0.3
RTFDC1-205ENST00000466260 BCL9O00512 1426 aa13.19□□□□□ -0.3
RTFDC1-205ENST00000466260 NCAPD2Q15021 1401 aa13.19□□□□□ -0.3
RTFDC1-205ENST00000466260 PCDH11XQ9BZA7 1347 aa13.18□□□□□ -0.3
RTFDC1-205ENST00000466260 PCDH11YQ9BZA8 1340 aa13.18□□□□□ -0.3
RTFDC1-205ENST00000466260 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
RTFDC1-205ENST00000466260 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
RTFDC1-205ENST00000466260 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
RTFDC1-205ENST00000466260 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-205ENST00000466260 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-205ENST00000466260 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
RTFDC1-205ENST00000466260 LY75O60449 1722 aa13.16□□□□□ -0.3
RTFDC1-205ENST00000466260 CYP27B1O15528 508 aa13.15□□□□□ -0.3
RTFDC1-205ENST00000466260 HMOX1P09601 288 aa13.15□□□□□ -0.3
RTFDC1-205ENST00000466260 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-205ENST00000466260 SULT6B1Q6IMI4 303 aa13.15□□□□□ -0.3
RTFDC1-205ENST00000466260 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
RTFDC1-205ENST00000466260 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
RTFDC1-205ENST00000466260 IL13P35225 146 aa13.14□□□□□ -0.31
RTFDC1-205ENST00000466260 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
RTFDC1-205ENST00000466260 PLSCR1O15162 318 aa13.13□□□□□ -0.31
RTFDC1-205ENST00000466260 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
RTFDC1-205ENST00000466260 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
RTFDC1-205ENST00000466260 NBPF14Q5TI25 921 aa13.13□□□□□ -0.31
RTFDC1-205ENST00000466260 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
RTFDC1-205ENST00000466260 MPRIPQ6WCQ1 1025 aa13.12□□□□□ -0.31
RTFDC1-205ENST00000466260 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
RTFDC1-205ENST00000466260 PHKG2P15735 406 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 KCNQ4P56696 695 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 PROM2Q8N271 834 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 C5P01031 1676 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
RTFDC1-205ENST00000466260 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
RTFDC1-205ENST00000466260 DSG3P32926 999 aa13.1□□□□□ -0.31
RTFDC1-205ENST00000466260 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-205ENST00000466260 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
RTFDC1-205ENST00000466260 KDRP35968 1356 aa13.08□□□□□ -0.31
RTFDC1-205ENST00000466260 CASZ1Q86V15 1759 aa13.08□□□□□ -0.32
RTFDC1-205ENST00000466260 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
RTFDC1-205ENST00000466260 STK32BQ9NY57 414 aa13.08□□□□□ -0.32
RTFDC1-205ENST00000466260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.324e-7■□□□□ 9.9
RTFDC1-205ENST00000466260 LRP5O75197 1615 aa13.07□□□□□ -0.32
RTFDC1-205ENST00000466260 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
RTFDC1-205ENST00000466260 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
RTFDC1-205ENST00000466260 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
RTFDC1-205ENST00000466260 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
RTFDC1-205ENST00000466260 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-205ENST00000466260 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
RTFDC1-205ENST00000466260 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-205ENST00000466260 PIGBQ92521 554 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms