RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 DDX54Q8TDD1 881 aaKnown RBP31.05■■■□□ 2.56
SNX21-208ENST00000466252 SBF2Q86WG5 1849 aa31.03■■■□□ 2.56
SNX21-208ENST00000466252 TRIM37O94972 964 aa31.03■■■□□ 2.56
SNX21-208ENST00000466252 SULT6B1Q6IMI4 303 aa31.03■■■□□ 2.56
SNX21-208ENST00000466252 AEBP1Q8IUX7 1158 aa31.03■■■□□ 2.56
SNX21-208ENST00000466252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.03■■■□□ 2.56
SNX21-208ENST00000466252 SHANK3Q9BYB0 1731 aa31.02■■■□□ 2.56
SNX21-208ENST00000466252 KDRP35968 1356 aa31.02■■■□□ 2.56
SNX21-208ENST00000466252 CFAP53Q96M91 514 aa31■■■□□ 2.55
SNX21-208ENST00000466252 PRKRIP1Q9H875 184 aaPredicted RBP30.99■■■□□ 2.55
SNX21-208ENST00000466252 CYP27B1O15528 508 aa30.98■■■□□ 2.55
SNX21-208ENST00000466252 PTF1AQ7RTS3 328 aa30.98■■■□□ 2.55
SNX21-208ENST00000466252 KAT6BQ8WYB5 2073 aa30.97■■■□□ 2.55
SNX21-208ENST00000466252 SPG7Q9UQ90 795 aa30.97■■■□□ 2.55
SNX21-208ENST00000466252 PLEKHG2Q9H7P9 1386 aa30.96■■■□□ 2.55
SNX21-208ENST00000466252 PKD1L3Q7Z443 1732 aa30.95■■■□□ 2.55
SNX21-208ENST00000466252 HMOX1P09601 288 aa30.95■■■□□ 2.55
SNX21-208ENST00000466252 SF3B2Q13435 895 aaKnown RBP30.95■■■□□ 2.55
SNX21-208ENST00000466252 DEFB132Q7Z7B7 95 aa30.95■■■□□ 2.55
SNX21-208ENST00000466252 BCL11BQ9C0K0 894 aaPredicted RBP30.95■■■□□ 2.55
SNX21-208ENST00000466252 KCNQ2O43526 872 aa30.94■■■□□ 2.54
SNX21-208ENST00000466252 PCDH11XQ9BZA7 1347 aa30.93■■■□□ 2.54
SNX21-208ENST00000466252 PCDH11YQ9BZA8 1340 aa30.93■■■□□ 2.54
SNX21-208ENST00000466252 U2SURPO15042 1029 aaKnown RBP30.92■■■□□ 2.54
SNX21-208ENST00000466252 NKX1-1Q15270 411 aaPredicted RBP30.92■■■□□ 2.54
SNX21-208ENST00000466252 PLEKHO1Q53GL0 409 aaPredicted RBP30.92■■■□□ 2.54
SNX21-208ENST00000466252 MYBBP1AQ9BQG0 1328 aaKnown RBP30.92■■■□□ 2.54
SNX21-208ENST00000466252 TNS1Q9HBL0 1735 aaKnown RBP30.91■■■□□ 2.54
SNX21-208ENST00000466252 APBA3O96018 575 aa30.91■■■□□ 2.54
SNX21-208ENST00000466252 ACSBG1Q96GR2 724 aa30.91■■■□□ 2.54
SNX21-208ENST00000466252 NUDCQ9Y266 331 aa30.91■■■□□ 2.54
SNX21-208ENST00000466252 AMOTQ4VCS5 1084 aa30.9■■■□□ 2.54
SNX21-208ENST00000466252 PHKG2P15735 406 aa30.88■■■□□ 2.53
SNX21-208ENST00000466252 BAG6P46379 1132 aa30.88■■■□□ 2.53
SNX21-208ENST00000466252 EN1Q05925 392 aaPredicted RBP30.88■■■□□ 2.53
SNX21-208ENST00000466252 IFNL2Q8IZJ0 200 aa30.88■■■□□ 2.53
SNX21-208ENST00000466252 CAMKK2Q96RR4 588 aa30.87■■■□□ 2.53
SNX21-208ENST00000466252 PRIM1P49642 420 aaKnown RBP30.86■■■□□ 2.53
SNX21-208ENST00000466252 PLSCR1O15162 318 aa30.85■■■□□ 2.53
SNX21-208ENST00000466252 U2AF1L5P0DN76 240 aaPredicted RBP30.83■■■□□ 2.53
SNX21-208ENST00000466252 U2AF1Q01081 240 aaKnown RBP eCLIP30.83■■■□□ 2.53
SNX21-208ENST00000466252 RSPH6AQ9H0K4 717 aa30.83■■■□□ 2.53
SNX21-208ENST00000466252 NHSQ6T4R5 1651 aa30.83■■■□□ 2.53
SNX21-208ENST00000466252 FCHSD2O94868 740 aa30.82■■■□□ 2.52
SNX21-208ENST00000466252 EZH2Q15910 746 aaKnown RBP30.82■■■□□ 2.52
SNX21-208ENST00000466252 MTHFSDQ2M296 383 aaKnown RBP30.8■■■□□ 2.52
SNX21-208ENST00000466252 ZNF530Q6P9A1 599 aaPredicted RBP30.8■■■□□ 2.52
SNX21-208ENST00000466252 PROM2Q8N271 834 aa30.79■■■□□ 2.52
SNX21-208ENST00000466252 PHACTR3Q96KR7 559 aa30.79■■■□□ 2.52
SNX21-208ENST00000466252 PRKAR2BP31323 418 aa30.77■■■□□ 2.52
SNX21-208ENST00000466252 DOT1LQ8TEK3 1739 aa30.77■■■□□ 2.52
SNX21-208ENST00000466252 SYTL4Q96C24 671 aaPredicted RBP30.76■■■□□ 2.51
SNX21-208ENST00000466252 BTAF1O14981 1849 aa30.75■■■□□ 2.51
SNX21-208ENST00000466252 HSP90AB1P08238 724 aaKnown RBP30.75■■■□□ 2.51
SNX21-208ENST00000466252 AKAP4Q5JQC9 854 aa30.75■■■□□ 2.51
SNX21-208ENST00000466252 DCAF5Q96JK2 942 aa30.75■■■□□ 2.51
SNX21-208ENST00000466252 ITGB4P16144 1822 aa30.75■■■□□ 2.51
SNX21-208ENST00000466252 TOGARAM1Q9Y4F4 1720 aa30.74■■■□□ 2.51
SNX21-208ENST00000466252 ANP32CO43423 234 aa30.73■■■□□ 2.51
SNX21-208ENST00000466252 C1orf141Q5JVX7 400 aa30.73■■■□□ 2.51
SNX21-208ENST00000466252 MPRIPQ6WCQ1 1025 aa30.72■■■□□ 2.51
SNX21-208ENST00000466252 PLEKHF1Q96S99 279 aa30.72■■■□□ 2.51
SNX21-208ENST00000466252 ERVV-2B6SEH9 535 aa30.71■■■□□ 2.51
SNX21-208ENST00000466252 PIGBQ92521 554 aa30.71■■■□□ 2.51
SNX21-208ENST00000466252 CCDC184Q52MB2 194 aa30.7■■■□□ 2.51
SNX21-208ENST00000466252 KDM6AO15550 1401 aaPredicted RBP30.7■■■□□ 2.5
SNX21-208ENST00000466252 LGR6Q9HBX8 967 aa30.69■■■□□ 2.5
SNX21-208ENST00000466252 RGPD3A6NKT7 1758 aaPredicted RBP30.69■■■□□ 2.5
SNX21-208ENST00000466252 RGPD4Q7Z3J3 1758 aa30.69■■■□□ 2.5
SNX21-208ENST00000466252 TXNRD1Q16881 649 aa30.68■■■□□ 2.5
SNX21-208ENST00000466252 GAS2L2Q8NHY3 880 aa30.68■■■□□ 2.5
SNX21-208ENST00000466252 RNMTO43148 476 aaKnown RBP30.65■■■□□ 2.5
SNX21-208ENST00000466252 RREB1Q92766 1687 aa30.65■■■□□ 2.5
SNX21-208ENST00000466252 SCN11AQ9UI33 1791 aa30.64■■■□□ 2.5
SNX21-208ENST00000466252 TMOD3Q9NYL9 352 aa30.64■■■□□ 2.5
SNX21-208ENST00000466252 IL17REQ8NFR9 667 aa30.63■■■□□ 2.49
SNX21-208ENST00000466252 PNNQ9H307 717 aaKnown RBP30.63■■■□□ 2.49
SNX21-208ENST00000466252 ADAMTS8Q9UP79 889 aa30.63■■■□□ 2.49
SNX21-208ENST00000466252 GNAT3A8MTJ3 354 aa30.62■■■□□ 2.49
SNX21-208ENST00000466252 NFATC2IPQ8NCF5 419 aa30.62■■■□□ 2.49
SNX21-208ENST00000466252 LRRC4BQ9NT99 713 aa30.62■■■□□ 2.49
SNX21-208ENST00000466252 CABP4P57796 275 aa30.61■■■□□ 2.49
SNX21-208ENST00000466252 VIRMAQ69YN4 1812 aaKnown RBP30.61■■■□□ 2.49
SNX21-208ENST00000466252 ATG3Q9NT62 314 aa30.6■■■□□ 2.49
SNX21-208ENST00000466252 ADAMTS7Q9UKP4 1686 aa30.6■■■□□ 2.49
SNX21-208ENST00000466252 ASAP1Q9ULH1 1129 aa30.6■■■□□ 2.49
SNX21-208ENST00000466252 LY75O60449 1722 aa30.59■■■□□ 2.49
SNX21-208ENST00000466252 NUP188Q5SRE5 1749 aa30.59■■■□□ 2.49
SNX21-208ENST00000466252 MAP3K5Q99683 1374 aa30.58■■■□□ 2.49
SNX21-208ENST00000466252 SMARCC1Q92922 1105 aaPredicted RBP30.58■■■□□ 2.49
SNX21-208ENST00000466252 WDR43Q15061 677 aaKnown RBP eCLIP30.57■■■□□ 2.48
SNX21-208ENST00000466252 SLC27A3Q5K4L6 730 aa30.57■■■□□ 2.48
SNX21-208ENST00000466252 SLC52A2Q9HAB3 445 aa30.57■■■□□ 2.48
SNX21-208ENST00000466252 HTATSF1O43719 755 aaKnown RBP30.55■■■□□ 2.48
SNX21-208ENST00000466252 PNISRQ8TF01 805 aaKnown RBP30.55■■■□□ 2.48
SNX21-208ENST00000466252 NEFMP07197 916 aa30.54■■■□□ 2.48
SNX21-208ENST00000466252 KCNQ4P56696 695 aa30.54■■■□□ 2.48
SNX21-208ENST00000466252 PALLDQ8WX93 1383 aa30.54■■■□□ 2.48
SNX21-208ENST00000466252 NFE2L2Q16236 605 aa30.53■■■□□ 2.48
SNX21-208ENST00000466252 CEMIPQ8WUJ3 1361 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms