RNA–Protein interactions for RNA: ENST00000465943.1

CAPN10-213, Transcript of calpain 10, humanhuman

TSL 4

Gene CAPN10, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-213ENST00000465943 HSPA5P11021 654 aaKnown RBP28.64■■■□□ 2.18
CAPN10-213ENST00000465943 PDGFDQ9GZP0 370 aaPredicted RBP28.64■■■□□ 2.18
CAPN10-213ENST00000465943 EMILIN1Q9Y6C2 1016 aa28.63■■■□□ 2.17
CAPN10-213ENST00000465943 EIF4G2P78344 907 aaKnown RBP eCLIP28.62■■■□□ 2.17
CAPN10-213ENST00000465943 SPON1Q9HCB6 807 aa28.62■■■□□ 2.17
CAPN10-213ENST00000465943 STK32BQ9NY57 414 aa28.62■■■□□ 2.17
CAPN10-213ENST00000465943 KIF24Q5T7B8 1368 aa28.62■■■□□ 2.17
CAPN10-213ENST00000465943 LY75O60449 1722 aa28.61■■■□□ 2.17
CAPN10-213ENST00000465943 ZCRB1Q8TBF4 217 aaKnown RBP28.6■■■□□ 2.17
CAPN10-213ENST00000465943 PKD1L3Q7Z443 1732 aa28.6■■■□□ 2.17
CAPN10-213ENST00000465943 SYTL4Q96C24 671 aaPredicted RBP28.59■■■□□ 2.17
CAPN10-213ENST00000465943 CGNL1Q0VF96 1302 aa28.59■■■□□ 2.17
CAPN10-213ENST00000465943 TUBGCP6Q96RT7 1819 aa28.58■■■□□ 2.17
CAPN10-213ENST00000465943 SLC15A2Q16348 729 aa28.58■■■□□ 2.17
CAPN10-213ENST00000465943 PPP1R1BQ9UD71 204 aaPredicted RBP28.58■■■□□ 2.17
CAPN10-213ENST00000465943 PPM1GO15355 546 aaPredicted RBP28.57■■■□□ 2.16
CAPN10-213ENST00000465943 RAPGEF4Q8WZA2 1011 aa28.57■■■□□ 2.16
CAPN10-213ENST00000465943 NSD2O96028 1365 aa28.57■■■□□ 2.16
CAPN10-213ENST00000465943 TOGARAM1Q9Y4F4 1720 aa28.57■■■□□ 2.16
CAPN10-213ENST00000465943 ZBTB7AO95365 584 aa28.56■■■□□ 2.16
CAPN10-213ENST00000465943 QSER1Q2KHR3 1735 aa28.55■■■□□ 2.16
CAPN10-213ENST00000465943 PRIM1P49642 420 aaKnown RBP28.54■■■□□ 2.16
CAPN10-213ENST00000465943 TATP17735 454 aaPredicted RBP28.53■■■□□ 2.16
CAPN10-213ENST00000465943 LRRC4BQ9NT99 713 aa28.53■■■□□ 2.16
CAPN10-213ENST00000465943 ZNF827Q17R98 1081 aa28.52■■■□□ 2.16
CAPN10-213ENST00000465943 NCAPD2Q15021 1401 aa28.51■■■□□ 2.15
CAPN10-213ENST00000465943 ITGB4P16144 1822 aa28.5■■■□□ 2.15
CAPN10-213ENST00000465943 TNNT2P45379 298 aaPredicted RBP28.5■■■□□ 2.15
CAPN10-213ENST00000465943 ATF5Q9Y2D1 282 aaPredicted RBP28.49■■■□□ 2.15
CAPN10-213ENST00000465943 PCDH11XQ9BZA7 1347 aa28.48■■■□□ 2.15
CAPN10-213ENST00000465943 PCDH11YQ9BZA8 1340 aa28.48■■■□□ 2.15
CAPN10-213ENST00000465943 KCNQ4P56696 695 aa28.48■■■□□ 2.15
CAPN10-213ENST00000465943 PANK3Q9H999 370 aa28.47■■■□□ 2.15
CAPN10-213ENST00000465943 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
CAPN10-213ENST00000465943 C5P01031 1676 aa28.46■■■□□ 2.15
CAPN10-213ENST00000465943 POLKQ9UBT6 870 aa28.46■■■□□ 2.15
CAPN10-213ENST00000465943 PTGER2P43116 358 aa28.44■■■□□ 2.14
CAPN10-213ENST00000465943 SLC27A3Q5K4L6 730 aa28.44■■■□□ 2.14
CAPN10-213ENST00000465943 MTFR1LQ9H019 292 aa28.42■■■□□ 2.14
CAPN10-213ENST00000465943 TAF1LQ8IZX4 1826 aa28.41■■■□□ 2.14
CAPN10-213ENST00000465943 CYP27B1O15528 508 aa28.41■■■□□ 2.14
CAPN10-213ENST00000465943 AKT1S1Q96B36 256 aa28.41■■■□□ 2.14
CAPN10-213ENST00000465943 EYA1Q99502 592 aa28.41■■■□□ 2.14
CAPN10-213ENST00000465943 CCNL1Q9UK58 526 aaPredicted RBP28.39■■■□□ 2.14
CAPN10-213ENST00000465943 COL24A1Q17RW2 1714 aa28.38■■■□□ 2.13
CAPN10-213ENST00000465943 EIF4A2Q14240 407 aaKnown RBP28.38■■■□□ 2.13
CAPN10-213ENST00000465943 SGIP1Q9BQI5 828 aa28.36■■■□□ 2.13
CAPN10-213ENST00000465943 PNPLA7Q6ZV29 1317 aa28.36■■■□□ 2.13
CAPN10-213ENST00000465943 MPRIPQ6WCQ1 1025 aa28.35■■■□□ 2.13
CAPN10-213ENST00000465943 TFCP2L1Q9NZI6 479 aa28.34■■■□□ 2.13
CAPN10-213ENST00000465943 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
CAPN10-213ENST00000465943 KIF7Q2M1P5 1343 aa28.34■■■□□ 2.13
CAPN10-213ENST00000465943 PALLDQ8WX93 1383 aa28.34■■■□□ 2.13
CAPN10-213ENST00000465943 FHDC1Q9C0D6 1143 aaPredicted RBP28.32■■■□□ 2.12
CAPN10-213ENST00000465943 MORC1Q86VD1 984 aa28.31■■■□□ 2.12
CAPN10-213ENST00000465943 C4BP0C0L5 1744 aa28.31■■■□□ 2.12
CAPN10-213ENST00000465943 IGSF1Q8N6C5 1336 aa28.3■■■□□ 2.12
CAPN10-213ENST00000465943 ARXQ96QS3 562 aa28.28■■■□□ 2.12
CAPN10-213ENST00000465943 KNSTRNQ9Y448 316 aa28.28■■■□□ 2.12
CAPN10-213ENST00000465943 NKX1-1Q15270 411 aaPredicted RBP28.27■■■□□ 2.12
CAPN10-213ENST00000465943 DCAF8L1A6NGE4 600 aa28.26■■■□□ 2.11
CAPN10-213ENST00000465943 PHKG2P15735 406 aa28.25■■■□□ 2.11
CAPN10-213ENST00000465943 SYT17Q9BSW7 474 aa28.25■■■□□ 2.11
CAPN10-213ENST00000465943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.25■■■□□ 2.11
CAPN10-213ENST00000465943 UBR3Q6ZT12 1888 aa28.25■■■□□ 2.11
CAPN10-213ENST00000465943 IFNL2Q8IZJ0 200 aa28.24■■■□□ 2.11
CAPN10-213ENST00000465943 SLC16A10Q8TF71 515 aa28.24■■■□□ 2.11
CAPN10-213ENST00000465943 PIGBQ92521 554 aa28.24■■■□□ 2.11
CAPN10-213ENST00000465943 MSH5O43196 834 aa28.23■■■□□ 2.11
CAPN10-213ENST00000465943 KLHL34Q8N239 644 aa28.22■■■□□ 2.11
CAPN10-213ENST00000465943 AMER1Q5JTC6 1135 aaPredicted RBP28.21■■■□□ 2.11
CAPN10-213ENST00000465943 SMARCC1Q92922 1105 aaPredicted RBP28.21■■■□□ 2.11
CAPN10-213ENST00000465943 TMOD3Q9NYL9 352 aa28.21■■■□□ 2.11
CAPN10-213ENST00000465943 PLEKHG2Q9H7P9 1386 aa28.21■■■□□ 2.11
CAPN10-213ENST00000465943 POLD1P28340 1107 aa28.2■■■□□ 2.1
CAPN10-213ENST00000465943 COL23A1Q86Y22 540 aaPredicted RBP28.2■■■□□ 2.1
CAPN10-213ENST00000465943 AEBP1Q8IUX7 1158 aa28.2■■■□□ 2.1
CAPN10-213ENST00000465943 YY1P25490 414 aa28.19■■■□□ 2.1
CAPN10-213ENST00000465943 MAP3K5Q99683 1374 aa28.19■■■□□ 2.1
CAPN10-213ENST00000465943 KDM6AO15550 1401 aaPredicted RBP28.17■■■□□ 2.1
CAPN10-213ENST00000465943 MSL1Q68DK7 614 aa28.16■■■□□ 2.1
CAPN10-213ENST00000465943 ASAP1Q9ULH1 1129 aa28.16■■■□□ 2.1
CAPN10-213ENST00000465943 VIRMAQ69YN4 1812 aaKnown RBP28.15■■■□□ 2.1
CAPN10-213ENST00000465943 ZNF530Q6P9A1 599 aaPredicted RBP28.14■■■□□ 2.1
CAPN10-213ENST00000465943 AK7Q96M32 723 aa28.14■■■□□ 2.1
CAPN10-213ENST00000465943 COL5A3P25940 1745 aaPredicted RBP28.13■■■□□ 2.09
CAPN10-213ENST00000465943 LOC102724428A0A0B4J2F2 783 aa28.13■■■□□ 2.09
CAPN10-213ENST00000465943 SIK1P57059 783 aa28.13■■■□□ 2.09
CAPN10-213ENST00000465943 PLEKHO1Q53GL0 409 aaPredicted RBP28.13■■■□□ 2.09
CAPN10-213ENST00000465943 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
CAPN10-213ENST00000465943 AMIGO3Q86WK7 504 aa28.13■■■□□ 2.09
CAPN10-213ENST00000465943 SCN11AQ9UI33 1791 aa28.13■■■□□ 2.09
CAPN10-213ENST00000465943 IL13P35225 146 aa28.12■■■□□ 2.09
CAPN10-213ENST00000465943 SULT6B1Q6IMI4 303 aa28.12■■■□□ 2.09
CAPN10-213ENST00000465943 SMIM5Q71RC9 77 aa28.12■■■□□ 2.09
CAPN10-213ENST00000465943 LINC00116Q8NCU8 138 aa28.12■■■□□ 2.09
CAPN10-213ENST00000465943 ZNF831Q5JPB2 1677 aa28.12■■■□□ 2.09
CAPN10-213ENST00000465943 KDRP35968 1356 aa28.11■■■□□ 2.09
CAPN10-213ENST00000465943 PHF14O94880 888 aa28.11■■■□□ 2.09
CAPN10-213ENST00000465943 ATG3Q9NT62 314 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms