RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
CHPF2-202ENST00000465601 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
CHPF2-202ENST00000465601 RALBP1Q15311 655 aa16.67■□□□□ 0.26
CHPF2-202ENST00000465601 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
CHPF2-202ENST00000465601 CFAP53Q96M91 514 aa16.67■□□□□ 0.26
CHPF2-202ENST00000465601 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
CHPF2-202ENST00000465601 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
CHPF2-202ENST00000465601 DEFB132Q7Z7B7 95 aa16.65■□□□□ 0.26
CHPF2-202ENST00000465601 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
CHPF2-202ENST00000465601 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
CHPF2-202ENST00000465601 HMOX1P09601 288 aa16.64■□□□□ 0.25
CHPF2-202ENST00000465601 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
CHPF2-202ENST00000465601 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
CHPF2-202ENST00000465601 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
CHPF2-202ENST00000465601 BCL9O00512 1426 aa16.62■□□□□ 0.25
CHPF2-202ENST00000465601 CYP27B1O15528 508 aa16.62■□□□□ 0.25
CHPF2-202ENST00000465601 KCNQ2O43526 872 aa16.62■□□□□ 0.25
CHPF2-202ENST00000465601 APBA3O96018 575 aa16.62■□□□□ 0.25
CHPF2-202ENST00000465601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHPF2-202ENST00000465601 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
CHPF2-202ENST00000465601 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
CHPF2-202ENST00000465601 BAG6P46379 1132 aa16.61■□□□□ 0.25
CHPF2-202ENST00000465601 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
CHPF2-202ENST00000465601 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
CHPF2-202ENST00000465601 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
CHPF2-202ENST00000465601 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
CHPF2-202ENST00000465601 PKD1L3Q7Z443 1732 aa16.61■□□□□ 0.25
CHPF2-202ENST00000465601 TNS1Q9HBL0 1735 aaKnown RBP16.61■□□□□ 0.25
CHPF2-202ENST00000465601 KDRP35968 1356 aa16.61■□□□□ 0.25
CHPF2-202ENST00000465601 EN1Q05925 392 aaPredicted RBP16.6■□□□□ 0.25
CHPF2-202ENST00000465601 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
CHPF2-202ENST00000465601 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
CHPF2-202ENST00000465601 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
CHPF2-202ENST00000465601 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHPF2-202ENST00000465601 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
CHPF2-202ENST00000465601 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
CHPF2-202ENST00000465601 PHKG2P15735 406 aa16.57■□□□□ 0.24
CHPF2-202ENST00000465601 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
CHPF2-202ENST00000465601 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
CHPF2-202ENST00000465601 NKX1-1Q15270 411 aaPredicted RBP16.56■□□□□ 0.24
CHPF2-202ENST00000465601 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
CHPF2-202ENST00000465601 CAMKK2Q96RR4 588 aa16.56■□□□□ 0.24
CHPF2-202ENST00000465601 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
CHPF2-202ENST00000465601 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
CHPF2-202ENST00000465601 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
CHPF2-202ENST00000465601 BTAF1O14981 1849 aa16.54■□□□□ 0.24
CHPF2-202ENST00000465601 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
CHPF2-202ENST00000465601 PLSCR1O15162 318 aa16.53■□□□□ 0.24
CHPF2-202ENST00000465601 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
CHPF2-202ENST00000465601 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
CHPF2-202ENST00000465601 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
CHPF2-202ENST00000465601 ITGB4P16144 1822 aa16.53■□□□□ 0.24
CHPF2-202ENST00000465601 ANP32CO43423 234 aa16.52■□□□□ 0.24
CHPF2-202ENST00000465601 FCHSD2O94868 740 aa16.52■□□□□ 0.24
CHPF2-202ENST00000465601 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
CHPF2-202ENST00000465601 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
CHPF2-202ENST00000465601 HSP90AB1P08238 724 aaKnown RBP16.51■□□□□ 0.23
CHPF2-202ENST00000465601 PHACTR3Q96KR7 559 aa16.51■□□□□ 0.23
CHPF2-202ENST00000465601 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
CHPF2-202ENST00000465601 PROM2Q8N271 834 aa16.5■□□□□ 0.23
CHPF2-202ENST00000465601 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
CHPF2-202ENST00000465601 PIGBQ92521 554 aa16.49■□□□□ 0.23
CHPF2-202ENST00000465601 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
CHPF2-202ENST00000465601 TXNRD1Q16881 649 aa16.48■□□□□ 0.23
CHPF2-202ENST00000465601 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
CHPF2-202ENST00000465601 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
CHPF2-202ENST00000465601 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
CHPF2-202ENST00000465601 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
CHPF2-202ENST00000465601 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
CHPF2-202ENST00000465601 CCDC184Q52MB2 194 aa16.47■□□□□ 0.23
CHPF2-202ENST00000465601 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.23
CHPF2-202ENST00000465601 CABP4P57796 275 aa16.46■□□□□ 0.23
CHPF2-202ENST00000465601 RREB1Q92766 1687 aa16.46■□□□□ 0.23
CHPF2-202ENST00000465601 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.22
CHPF2-202ENST00000465601 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.22
CHPF2-202ENST00000465601 RNMTO43148 476 aaKnown RBP16.45■□□□□ 0.22
CHPF2-202ENST00000465601 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHPF2-202ENST00000465601 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
CHPF2-202ENST00000465601 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 NEFMP07197 916 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 KCNQ4P56696 695 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 NFATC2IPQ8NCF5 419 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
CHPF2-202ENST00000465601 ASAP1Q9ULH1 1129 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 NUP188Q5SRE5 1749 aa16.44■□□□□ 0.22
CHPF2-202ENST00000465601 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
CHPF2-202ENST00000465601 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
CHPF2-202ENST00000465601 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
CHPF2-202ENST00000465601 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
CHPF2-202ENST00000465601 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
CHPF2-202ENST00000465601 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
CHPF2-202ENST00000465601 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
CHPF2-202ENST00000465601 MAPK8IP3Q9UPT6 1336 aa16.42■□□□□ 0.22
CHPF2-202ENST00000465601 LY75O60449 1722 aa16.42■□□□□ 0.22
CHPF2-202ENST00000465601 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
CHPF2-202ENST00000465601 PALLDQ8WX93 1383 aa16.41■□□□□ 0.22
CHPF2-202ENST00000465601 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
CHPF2-202ENST00000465601 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
CHPF2-202ENST00000465601 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms