RNA–Protein interactions for RNA: ENST00000465369.5

EDEM1-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 5

Gene EDEM1, Length 1,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-206ENST00000465369 KRT28Q7Z3Y7 464 aa30.05■■■□□ 2.4
EDEM1-206ENST00000465369 TMEM94Q12767 1356 aa30.05■■■□□ 2.4
EDEM1-206ENST00000465369 SLIT3O75094 1523 aa30.05■■■□□ 2.4
EDEM1-206ENST00000465369 ZBTB40Q9NUA8 1239 aa30.04■■■□□ 2.4
EDEM1-206ENST00000465369 GCP02774 474 aa30.03■■■□□ 2.4
EDEM1-206ENST00000465369 HDAC1Q13547 482 aaPredicted RBP30.03■■■□□ 2.4
EDEM1-206ENST00000465369 FAM161AQ3B820 660 aa30.03■■■□□ 2.4
EDEM1-206ENST00000465369 API5Q9BZZ5 524 aaKnown RBP30.03■■■□□ 2.4
EDEM1-206ENST00000465369 MST1RQ04912 1400 aa30.03■■■□□ 2.4
EDEM1-206ENST00000465369 GNAT3A8MTJ3 354 aa30.03■■■□□ 2.4
EDEM1-206ENST00000465369 MSH5O43196 834 aa30.03■■■□□ 2.4
EDEM1-206ENST00000465369 TRPM3Q9HCF6 1732 aaPredicted RBP30.02■■■□□ 2.4
EDEM1-206ENST00000465369 XPCQ01831 940 aaPredicted RBP30.01■■■□□ 2.4
EDEM1-206ENST00000465369 USP19O94966 1318 aa30.01■■■□□ 2.39
EDEM1-206ENST00000465369 ABCC4O15439 1325 aa30■■■□□ 2.39
EDEM1-206ENST00000465369 ARHGEF25Q86VW2 580 aa29.99■■■□□ 2.39
EDEM1-206ENST00000465369 TSPYL4Q9UJ04 414 aa29.98■■■□□ 2.39
EDEM1-206ENST00000465369 MAP3K5Q99683 1374 aa29.98■■■□□ 2.39
EDEM1-206ENST00000465369 CADPS2Q86UW7 1296 aa29.97■■■□□ 2.39
EDEM1-206ENST00000465369 STRCP1A6NGW2 1772 aa29.97■■■□□ 2.39
EDEM1-206ENST00000465369 LMOD2Q6P5Q4 547 aa29.96■■■□□ 2.39
EDEM1-206ENST00000465369 BABAM1Q9NWV8 329 aa29.96■■■□□ 2.39
EDEM1-206ENST00000465369 HSPA2P54652 639 aa29.95■■■□□ 2.39
EDEM1-206ENST00000465369 NBPF6Q5VWK0 638 aa29.95■■■□□ 2.39
EDEM1-206ENST00000465369 NBPF4Q96M43 638 aa29.95■■■□□ 2.39
EDEM1-206ENST00000465369 ZBTB7BO15156 539 aaPredicted RBP29.95■■■□□ 2.38
EDEM1-206ENST00000465369 C8orf34Q49A92 452 aa29.95■■■□□ 2.38
EDEM1-206ENST00000465369 IPO9Q96P70 1041 aaKnown RBP29.95■■■□□ 2.38
EDEM1-206ENST00000465369 LRRC37A3O60309 1634 aa29.95■■■□□ 2.38
EDEM1-206ENST00000465369 PDZRN3Q9UPQ7 1066 aa29.94■■■□□ 2.38
EDEM1-206ENST00000465369 KRT24Q2M2I5 525 aa29.94■■■□□ 2.38
EDEM1-206ENST00000465369 MSH6P52701 1360 aa29.93■■■□□ 2.38
EDEM1-206ENST00000465369 ZBTB7CA1YPR0 619 aa29.93■■■□□ 2.38
EDEM1-206ENST00000465369 USHBP1Q8N6Y0 703 aa29.92■■■□□ 2.38
EDEM1-206ENST00000465369 PTPRCP08575 1304 aa29.91■■■□□ 2.38
EDEM1-206ENST00000465369 MIS18AQ9NYP9 233 aa29.91■■■□□ 2.38
EDEM1-206ENST00000465369 SOS1Q07889 1333 aaPredicted RBP29.89■■■□□ 2.38
EDEM1-206ENST00000465369 IL17REQ8NFR9 667 aa29.89■■■□□ 2.38
EDEM1-206ENST00000465369 ALS2Q96Q42 1657 aa29.89■■■□□ 2.37
EDEM1-206ENST00000465369 SMC5Q8IY18 1101 aa29.88■■■□□ 2.37
EDEM1-206ENST00000465369 NCAPD2Q15021 1401 aa29.87■■■□□ 2.37
EDEM1-206ENST00000465369 NPHP3Q7Z494 1330 aa29.87■■■□□ 2.37
EDEM1-206ENST00000465369 TAF7Q15545 349 aaPredicted RBP29.87■■■□□ 2.37
EDEM1-206ENST00000465369 ERICH6Q7L0X2 663 aa29.86■■■□□ 2.37
EDEM1-206ENST00000465369 NPM2Q86SE8 214 aaKnown RBP29.86■■■□□ 2.37
EDEM1-206ENST00000465369 INTS3Q68E01 1043 aaKnown RBP29.86■■■□□ 2.37
EDEM1-206ENST00000465369 AMOTQ4VCS5 1084 aa29.85■■■□□ 2.37
EDEM1-206ENST00000465369 ANKRD24Q8TF21 1146 aa29.85■■■□□ 2.37
EDEM1-206ENST00000465369 LMTK3Q96Q04 1460 aa29.84■■■□□ 2.37
EDEM1-206ENST00000465369 PLEKHO1Q53GL0 409 aaPredicted RBP29.84■■■□□ 2.37
EDEM1-206ENST00000465369 LRRC59Q96AG4 307 aaKnown RBP29.84■■■□□ 2.37
EDEM1-206ENST00000465369 CEMIPQ8WUJ3 1361 aa29.84■■■□□ 2.37
EDEM1-206ENST00000465369 KDM4FA0A1W2PPD8 638 aa29.83■■■□□ 2.37
EDEM1-206ENST00000465369 SLC4A2P04920 1241 aa29.83■■■□□ 2.37
EDEM1-206ENST00000465369 ANP32EQ9BTT0 268 aa29.83■■■□□ 2.37
EDEM1-206ENST00000465369 NOP58Q9Y2X3 529 aaKnown RBP29.83■■■□□ 2.37
EDEM1-206ENST00000465369 RGS12O14924 1447 aa29.81■■■□□ 2.36
EDEM1-206ENST00000465369 AKAP4Q5JQC9 854 aa29.81■■■□□ 2.36
EDEM1-206ENST00000465369 PLEKHG5O94827 1062 aa29.8■■■□□ 2.36
EDEM1-206ENST00000465369 MED1Q15648 1581 aaPredicted RBP29.8■■■□□ 2.36
EDEM1-206ENST00000465369 STK31Q9BXU1 1019 aa29.79■■■□□ 2.36
EDEM1-206ENST00000465369 RGPD2P0DJD1 1756 aa29.79■■■□□ 2.36
EDEM1-206ENST00000465369 CCDC30Q5VVM6 783 aa29.79■■■□□ 2.36
EDEM1-206ENST00000465369 ZBTB47Q9UFB7 747 aaPredicted RBP29.79■■■□□ 2.36
EDEM1-206ENST00000465369 AXIN2Q9Y2T1 843 aa29.79■■■□□ 2.36
EDEM1-206ENST00000465369 CAMTA1Q9Y6Y1 1673 aa29.78■■■□□ 2.36
EDEM1-206ENST00000465369 GCC1Q96CN9 775 aa29.78■■■□□ 2.36
EDEM1-206ENST00000465369 TNS3Q68CZ2 1445 aa29.78■■■□□ 2.36
EDEM1-206ENST00000465369 ERBB3P21860 1342 aa29.76■■■□□ 2.35
EDEM1-206ENST00000465369 ZNF530Q6P9A1 599 aaPredicted RBP29.76■■■□□ 2.35
EDEM1-206ENST00000465369 STRCQ7RTU9 1775 aa29.76■■■□□ 2.35
EDEM1-206ENST00000465369 NUCB1Q02818 461 aa29.75■■■□□ 2.35
EDEM1-206ENST00000465369 DDRGK1Q96HY6 314 aa29.75■■■□□ 2.35
EDEM1-206ENST00000465369 VIRMAQ69YN4 1812 aaKnown RBP29.75■■■□□ 2.35
EDEM1-206ENST00000465369 ZC3H6P61129 1189 aaKnown RBP29.75■■■□□ 2.35
EDEM1-206ENST00000465369 DDX17Q92841 729 aaKnown RBP29.75■■■□□ 2.35
EDEM1-206ENST00000465369 LMO7Q8WWI1 1683 aa29.74■■■□□ 2.35
EDEM1-206ENST00000465369 PXDNQ92626 1479 aa29.74■■■□□ 2.35
EDEM1-206ENST00000465369 C1orf141Q5JVX7 400 aa29.73■■■□□ 2.35
EDEM1-206ENST00000465369 C1orf115Q9H7X2 142 aa29.73■■■□□ 2.35
EDEM1-206ENST00000465369 SPATA31A3Q5VYP0 1347 aa29.72■■■□□ 2.35
EDEM1-206ENST00000465369 CHMP4AQ9BY43 222 aa29.72■■■□□ 2.35
EDEM1-206ENST00000465369 OVOS2A0A0G2JMS6 1433 aa29.72■■■□□ 2.35
EDEM1-206ENST00000465369 XIRP1Q702N8 1843 aaKnown RBP29.72■■■□□ 2.35
EDEM1-206ENST00000465369 LGR6Q9HBX8 967 aa29.71■■■□□ 2.35
EDEM1-206ENST00000465369 ABCC6O95255 1503 aa29.7■■■□□ 2.35
EDEM1-206ENST00000465369 CCT4P50991 539 aaKnown RBP29.7■■■□□ 2.34
EDEM1-206ENST00000465369 TEFQ10587 303 aa29.7■■■□□ 2.34
EDEM1-206ENST00000465369 CHD1LQ86WJ1 897 aa29.69■■■□□ 2.34
EDEM1-206ENST00000465369 SIRT2Q8IXJ6 389 aa29.69■■■□□ 2.34
EDEM1-206ENST00000465369 HOXB7P09629 217 aa29.68■■■□□ 2.34
EDEM1-206ENST00000465369 G2E3Q7L622 706 aa29.68■■■□□ 2.34
EDEM1-206ENST00000465369 BRINP3Q76B58 766 aa29.68■■■□□ 2.34
EDEM1-206ENST00000465369 RPAP2Q8IXW5 612 aaPredicted RBP29.67■■■□□ 2.34
EDEM1-206ENST00000465369 RNMTO43148 476 aaKnown RBP29.66■■■□□ 2.34
EDEM1-206ENST00000465369 FAM208AQ9UK61 1670 aaKnown RBP29.66■■■□□ 2.34
EDEM1-206ENST00000465369 CACNA1FO60840 1977 aa29.66■■■□□ 2.34
EDEM1-206ENST00000465369 FLIIQ13045 1269 aa29.66■■■□□ 2.34
EDEM1-206ENST00000465369 RGPD5Q99666 1765 aa29.65■■■□□ 2.34
EDEM1-206ENST00000465369 EIF4A1P60842 406 aaKnown RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms