RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 RPAP2Q8IXW5 612 aaPredicted RBP14.02□□□□□ -0.17
CCDC115-204ENST00000465315 KIF13AQ9H1H9 1805 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 SKOR2Q2VWA4 1001 aaPredicted RBP14.01□□□□□ -0.17
CCDC115-204ENST00000465315 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 CEP85Q6P2H3 762 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 NLRP1Q9C000 1473 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 PPLO60437 1756 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 PTPRMP28827 1452 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 ANKRD44Q8N8A2 993 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 SNX21Q969T3 373 aa14.01□□□□□ -0.17
CCDC115-204ENST00000465315 MCCP23508 829 aa14□□□□□ -0.17
CCDC115-204ENST00000465315 MTHFSDQ2M296 383 aaKnown RBP14□□□□□ -0.17
CCDC115-204ENST00000465315 ABCC4O15439 1325 aa14□□□□□ -0.17
CCDC115-204ENST00000465315 FAM135BQ49AJ0 1406 aa14□□□□□ -0.17
CCDC115-204ENST00000465315 GNAI2P04899 355 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
CCDC115-204ENST00000465315 RICTORQ6R327 1708 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 CHAMP1Q96JM3 812 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 MSH6P52701 1360 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 PRR36Q9H6K5 1346 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
CCDC115-204ENST00000465315 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 PNPLA6Q8IY17 1366 aa13.99□□□□□ -0.17
CCDC115-204ENST00000465315 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
CCDC115-204ENST00000465315 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
CCDC115-204ENST00000465315 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
CCDC115-204ENST00000465315 UPF3BQ9BZI7 483 aaKnown RBP13.98□□□□□ -0.17
CCDC115-204ENST00000465315 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
CCDC115-204ENST00000465315 ERC2O15083 957 aa13.98□□□□□ -0.17
CCDC115-204ENST00000465315 RAB3GAP1Q15042 981 aa13.98□□□□□ -0.17
CCDC115-204ENST00000465315 AMOTL2Q9Y2J4 779 aa13.98□□□□□ -0.17
CCDC115-204ENST00000465315 TNRQ92752 1358 aa13.98□□□□□ -0.17
CCDC115-204ENST00000465315 BAG4O95429 457 aaKnown RBP13.98□□□□□ -0.17
CCDC115-204ENST00000465315 NUCB2P80303 420 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 RNF214Q8ND24 703 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 ZC3H13Q5T200 1668 aaKnown RBP13.97□□□□□ -0.17
CCDC115-204ENST00000465315 PIK3C2BO00750 1634 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 PKP1Q13835 747 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 NUTM1Q86Y26 1132 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 SURF6O75683 361 aaKnown RBP13.97□□□□□ -0.17
CCDC115-204ENST00000465315 PTMAP06454 111 aaKnown RBP13.97□□□□□ -0.17
CCDC115-204ENST00000465315 GAS2L3Q86XJ1 694 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 CD163L1Q9NR16 1453 aa13.97□□□□□ -0.17
CCDC115-204ENST00000465315 MAP3K19Q56UN5 1328 aa13.96□□□□□ -0.17
CCDC115-204ENST00000465315 ARHGAP31Q2M1Z3 1444 aa13.96□□□□□ -0.17
CCDC115-204ENST00000465315 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
CCDC115-204ENST00000465315 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
CCDC115-204ENST00000465315 CHL1O00533 1208 aa13.96□□□□□ -0.17
CCDC115-204ENST00000465315 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.17
CCDC115-204ENST00000465315 PTMSP20962 102 aa13.96□□□□□ -0.17
CCDC115-204ENST00000465315 LRRCC1Q9C099 1032 aa13.96□□□□□ -0.17
CCDC115-204ENST00000465315 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
CCDC115-204ENST00000465315 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.18
CCDC115-204ENST00000465315 ANXA1P04083 346 aa13.96□□□□□ -0.18
CCDC115-204ENST00000465315 CCT4P50991 539 aaKnown RBP13.96□□□□□ -0.18
CCDC115-204ENST00000465315 HDGFL1Q5TGJ6 251 aa13.96□□□□□ -0.18
CCDC115-204ENST00000465315 CCDC30Q5VVM6 783 aa13.96□□□□□ -0.18
CCDC115-204ENST00000465315 LRRFIP2Q9Y608 721 aaKnown RBP13.96□□□□□ -0.18
CCDC115-204ENST00000465315 ALKQ9UM73 1620 aa13.96□□□□□ -0.18
CCDC115-204ENST00000465315 ARHGEF28Q8N1W1 1705 aaKnown RBP13.95□□□□□ -0.18
CCDC115-204ENST00000465315 FLIIQ13045 1269 aa13.95□□□□□ -0.18
CCDC115-204ENST00000465315 KIF2CQ99661 725 aa13.95□□□□□ -0.18
CCDC115-204ENST00000465315 USP26Q9BXU7 913 aa13.95□□□□□ -0.18
CCDC115-204ENST00000465315 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
CCDC115-204ENST00000465315 ESPNB1AK53 854 aa13.95□□□□□ -0.18
CCDC115-204ENST00000465315 KCNJ4P48050 445 aa13.95□□□□□ -0.18
CCDC115-204ENST00000465315 DTNBO60941 627 aa13.94□□□□□ -0.18
CCDC115-204ENST00000465315 EYA1Q99502 592 aa13.94□□□□□ -0.18
CCDC115-204ENST00000465315 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
CCDC115-204ENST00000465315 ARHGEF40Q8TER5 1519 aa13.94□□□□□ -0.18
CCDC115-204ENST00000465315 IFT172Q9UG01 1749 aa13.94□□□□□ -0.18
CCDC115-204ENST00000465315 MPNDQ8N594 471 aa13.94□□□□□ -0.18
CCDC115-204ENST00000465315 GNAI3P08754 354 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 LTKP29376 864 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 PDE1AP54750 535 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 GLIPR1L2Q4G1C9 344 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 KIAA1211Q6ZU35 1233 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
CCDC115-204ENST00000465315 PTPRCP08575 1304 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
CCDC115-204ENST00000465315 MX1P20591 662 aa13.92□□□□□ -0.18
CCDC115-204ENST00000465315 TEFQ10587 303 aa13.92□□□□□ -0.18
CCDC115-204ENST00000465315 THEMISQ8N1K5 641 aaPredicted RBP13.92□□□□□ -0.18
CCDC115-204ENST00000465315 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
CCDC115-204ENST00000465315 BRPF1P55201 1214 aaPredicted RBP13.92□□□□□ -0.18
CCDC115-204ENST00000465315 GDPD2Q9HCC8 539 aa13.92□□□□□ -0.18
CCDC115-204ENST00000465315 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
CCDC115-204ENST00000465315 FSD2A1L4K1 749 aa13.91□□□□□ -0.18
CCDC115-204ENST00000465315 DDX54Q8TDD1 881 aaKnown RBP13.91□□□□□ -0.18
CCDC115-204ENST00000465315 ROBO2Q9HCK4 1378 aa13.91□□□□□ -0.18
CCDC115-204ENST00000465315 RTL1A6NKG5 1358 aa13.91□□□□□ -0.18
CCDC115-204ENST00000465315 SRGAP3O43295 1099 aa13.91□□□□□ -0.18
CCDC115-204ENST00000465315 A2ML1A8K2U0 1454 aa13.9□□□□□ -0.18
CCDC115-204ENST00000465315 AIMP1Q12904 312 aaKnown RBP13.9□□□□□ -0.18
CCDC115-204ENST00000465315 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
CCDC115-204ENST00000465315 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
CCDC115-204ENST00000465315 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
CCDC115-204ENST00000465315 ATP7BP35670 1465 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms