RNA–Protein interactions for RNA: ENST00000465188.1

NME1-205, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-205ENST00000465188 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
NME1-205ENST00000465188 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
NME1-205ENST00000465188 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
NME1-205ENST00000465188 NCAPD2Q15021 1401 aa12.21□□□□□ -0.45
NME1-205ENST00000465188 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.45
NME1-205ENST00000465188 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
NME1-205ENST00000465188 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
NME1-205ENST00000465188 MSH6P52701 1360 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 ABCC4O15439 1325 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 FOXO3O43524 673 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
NME1-205ENST00000465188 MCM10Q7L590 875 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 API5Q9BZZ5 524 aaKnown RBP12.2□□□□□ -0.46
NME1-205ENST00000465188 ZBTB40Q9NUA8 1239 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
NME1-205ENST00000465188 LMO7Q8WWI1 1683 aa12.19□□□□□ -0.46
NME1-205ENST00000465188 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
NME1-205ENST00000465188 ATF3P18847 181 aa12.19□□□□□ -0.46
NME1-205ENST00000465188 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
NME1-205ENST00000465188 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
NME1-205ENST00000465188 SKAP1Q86WV1 359 aa12.19□□□□□ -0.46
NME1-205ENST00000465188 STRCQ7RTU9 1775 aa12.19□□□□□ -0.46
NME1-205ENST00000465188 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
NME1-205ENST00000465188 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
NME1-205ENST00000465188 GCP02774 474 aa12.18□□□□□ -0.46
NME1-205ENST00000465188 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
NME1-205ENST00000465188 ELL2O00472 640 aaPredicted RBP12.17□□□□□ -0.46
NME1-205ENST00000465188 MSH5O43196 834 aa12.17□□□□□ -0.46
NME1-205ENST00000465188 RGS3P49796 1198 aa12.17□□□□□ -0.46
NME1-205ENST00000465188 CADPS2Q86UW7 1296 aa12.17□□□□□ -0.46
NME1-205ENST00000465188 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
NME1-205ENST00000465188 RGPD5Q99666 1765 aa12.17□□□□□ -0.46
NME1-205ENST00000465188 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
NME1-205ENST00000465188 ABCC6O95255 1503 aa12.16□□□□□ -0.46
NME1-205ENST00000465188 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
NME1-205ENST00000465188 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
NME1-205ENST00000465188 CRYBG1Q9Y4K1 1723 aa12.16□□□□□ -0.46
NME1-205ENST00000465188 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
NME1-205ENST00000465188 COL18A1P39060 1754 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 PTPRCP08575 1304 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
NME1-205ENST00000465188 C8orf34Q49A92 452 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 NBPF6Q5VWK0 638 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 NBPF4Q96M43 638 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 KDM3BQ7LBC6 1761 aa12.15□□□□□ -0.46
NME1-205ENST00000465188 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 OVOS2A0A0G2JMS6 1433 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 RGS12O14924 1447 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 TNS3Q68CZ2 1445 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 HSPA2P54652 639 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 XPCQ01831 940 aaPredicted RBP12.14□□□□□ -0.47
NME1-205ENST00000465188 IL17REQ8NFR9 667 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 CEMIPQ8WUJ3 1361 aa12.14□□□□□ -0.47
NME1-205ENST00000465188 N4BP2Q86UW6 1770 aaPredicted RBP12.13□□□□□ -0.47
NME1-205ENST00000465188 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
NME1-205ENST00000465188 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
NME1-205ENST00000465188 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
NME1-205ENST00000465188 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
NME1-205ENST00000465188 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
NME1-205ENST00000465188 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
NME1-205ENST00000465188 IPO9Q96P70 1041 aaKnown RBP12.13□□□□□ -0.47
NME1-205ENST00000465188 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
NME1-205ENST00000465188 PXDNQ92626 1479 aa12.13□□□□□ -0.47
NME1-205ENST00000465188 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
NME1-205ENST00000465188 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
NME1-205ENST00000465188 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
NME1-205ENST00000465188 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
NME1-205ENST00000465188 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
NME1-205ENST00000465188 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
NME1-205ENST00000465188 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
NME1-205ENST00000465188 LRRC59Q96AG4 307 aaKnown RBP12.1□□□□□ -0.47
NME1-205ENST00000465188 MIS18AQ9NYP9 233 aa12.1□□□□□ -0.47
NME1-205ENST00000465188 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
NME1-205ENST00000465188 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
NME1-205ENST00000465188 ZNF530Q6P9A1 599 aaPredicted RBP12.09□□□□□ -0.47
NME1-205ENST00000465188 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
NME1-205ENST00000465188 ANP32EQ9BTT0 268 aa12.09□□□□□ -0.47
NME1-205ENST00000465188 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
NME1-205ENST00000465188 NOP58Q9Y2X3 529 aaKnown RBP12.09□□□□□ -0.47
NME1-205ENST00000465188 ERBB3P21860 1342 aa12.09□□□□□ -0.47
NME1-205ENST00000465188 CPDO75976 1380 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 HOXB7P09629 217 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 NUCB1Q02818 461 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 DDRGK1Q96HY6 314 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 STK31Q9BXU1 1019 aa12.08□□□□□ -0.48
NME1-205ENST00000465188 SCN11AQ9UI33 1791 aa12.07□□□□□ -0.48
NME1-205ENST00000465188 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
NME1-205ENST00000465188 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
NME1-205ENST00000465188 PXDNLA1KZ92 1463 aa12.07□□□□□ -0.48
NME1-205ENST00000465188 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
NME1-205ENST00000465188 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
NME1-205ENST00000465188 C1orf141Q5JVX7 400 aa12.06□□□□□ -0.48
NME1-205ENST00000465188 BRINP3Q76B58 766 aa12.06□□□□□ -0.48
NME1-205ENST00000465188 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
NME1-205ENST00000465188 PKD1L3Q7Z443 1732 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms