RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 CHIC1Q5VXU3 224 aa8.68□□□□□ -1.02
PBX1-204ENST00000465089 HSP90AA5PQ58FG0 334 aa8.68□□□□□ -1.02
PBX1-204ENST00000465089 EIF2AQ9BY44 585 aaKnown RBP8.68□□□□□ -1.02
PBX1-204ENST00000465089 VPS37CA5D8V6 355 aaPredicted RBP8.68□□□□□ -1.02
PBX1-204ENST00000465089 ERCC6LQ2NKX8 1250 aa8.68□□□□□ -1.02
PBX1-204ENST00000465089 MSANTD4Q8NCY6 345 aa8.68□□□□□ -1.02
PBX1-204ENST00000465089 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
PBX1-204ENST00000465089 GBP5Q96PP8 586 aa8.68□□□□□ -1.02
PBX1-204ENST00000465089 TNPO1Q92973 898 aaKnown RBP8.67□□□□□ -1.02
PBX1-204ENST00000465089 TRIM35Q9UPQ4 493 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 STK24Q9Y6E0 443 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 A0A1B0GW55 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 IPO5O00410 1097 aaKnown RBP8.67□□□□□ -1.02
PBX1-204ENST00000465089 NOL3O60936 208 aaKnown RBP8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4L2P0CJ85 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4L3P0CJ86 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4L4P0CJ87 422 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4L5P0CJ88 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4L6P0CJ89 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4L7P0CJ90 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 HAUS8Q9BT25 410 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 BMP2KQ9NSY1 1161 aaPredicted RBP8.67□□□□□ -1.02
PBX1-204ENST00000465089 DUX4Q9UBX2 424 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DDX19BQ9UMR2 479 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 VPS8Q8N3P4 1428 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 SCRIBQ14160 1630 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 MAP3K21Q5TCX8 1036 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 KCNG1Q9UIX4 513 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 ATP2A1O14983 1001 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 NONOQ15233 471 aaKnown RBP eCLIP8.67□□□□□ -1.02
PBX1-204ENST00000465089 CFAP45Q9UL16 551 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 CEP131Q9UPN4 1083 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 CPLX1O14810 134 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 TRIM5Q9C035 493 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 EPB41L2O43491 1005 aaKnown RBP8.67□□□□□ -1.02
PBX1-204ENST00000465089 CCDC148Q8NFR7 591 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 PPP1R9BQ96SB3 815 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 ABCD1P33897 745 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 MRVI1Q9Y6F6 885 aa8.67□□□□□ -1.02
PBX1-204ENST00000465089 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 PDE6BP35913 854 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 HSPA8P11142 646 aaKnown RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 MAD1L1Q9Y6D9 718 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 FRMD3A2A2Y4 597 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 PPP1R2P41236 205 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 MAGEC2Q9UBF1 373 aaPredicted RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 FAM184BQ9ULE4 1060 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 SUPT6HQ7KZ85 1726 aaKnown RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 CDK5RAP3Q96JB5 506 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 FSD1Q9BTV5 496 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 PFDN4Q9NQP4 134 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 PATL1Q86TB9 770 aaKnown RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 ZSCAN12O43309 604 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 MCM5P33992 734 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 ATP6V1E1P36543 226 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 CFDP1Q9UEE9 299 aaPredicted RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 KIF5AQ12840 1032 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
PBX1-204ENST00000465089 MYCBPQ99417 103 aaPredicted RBP8.66□□□□□ -1.02
PBX1-204ENST00000465089 PDE4CQ08493 712 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 CCDC50Q8IVM0 306 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 GNL3LQ9NVN8 582 aaKnown RBP8.65□□□□□ -1.02
PBX1-204ENST00000465089 BUB1BO60566 1050 aaPredicted RBP8.65□□□□□ -1.02
PBX1-204ENST00000465089 AFAP1L2Q8N4X5 818 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 NSRP1Q9H0G5 558 aaKnown RBP8.65□□□□□ -1.02
PBX1-204ENST00000465089 MACROD2A1Z1Q3 448 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 TAF7LQ5H9L4 462 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 ATP2A2P16615 1042 aaKnown RBP8.65□□□□□ -1.02
PBX1-204ENST00000465089 ATP5DP30049 168 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 DAAM2Q86T65 1068 aa8.65□□□□□ -1.02
PBX1-204ENST00000465089 ZNF396Q96N95 335 aaPredicted RBP8.65□□□□□ -1.02
PBX1-204ENST00000465089 CCDC158Q5M9N0 1113 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 FBXW7Q969H0 707 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.65□□□□□ -1.03
PBX1-204ENST00000465089 NT5C2P49902 561 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 RTEL1Q9NZ71 1219 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 NEBLO76041 1014 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 CCDC57Q2TAC2 916 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 CFAP58Q5T655 872 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 HOMER1Q86YM7 354 aa8.65□□□□□ -1.03
PBX1-204ENST00000465089 SPATS2Q86XZ4 545 aaKnown RBP8.64□□□□□ -1.03
PBX1-204ENST00000465089 FAF1Q9UNN5 650 aaPredicted RBP8.64□□□□□ -1.03
PBX1-204ENST00000465089 TAF11Q15544 211 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 CACTINQ8WUQ7 758 aaKnown RBP8.64□□□□□ -1.03
PBX1-204ENST00000465089 TACO1Q9BSH4 297 aaKnown RBP8.64□□□□□ -1.03
PBX1-204ENST00000465089 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 NEK11Q8NG66 645 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 BMP15O95972 392 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 CCDC122Q5T0U0 273 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 OTUD6BQ8N6M0 293 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 CCDC12Q8WUD4 166 aaPredicted RBP8.64□□□□□ -1.03
PBX1-204ENST00000465089 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 RAB3GAP2Q9H2M9 1393 aa8.64□□□□□ -1.03
PBX1-204ENST00000465089 GIMAP4Q9NUV9 329 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms