RNA–Protein interactions for RNA: ENST00000465068.5

NUP58-207, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-207ENST00000465068 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
NUP58-207ENST00000465068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.54
NUP58-207ENST00000465068 MYBBP1AQ9BQG0 1328 aaKnown RBP18.4■□□□□ 0.54
NUP58-207ENST00000465068 CYP27B1O15528 508 aa18.39■□□□□ 0.53
NUP58-207ENST00000465068 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
NUP58-207ENST00000465068 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
NUP58-207ENST00000465068 SHANK3Q9BYB0 1731 aa18.38■□□□□ 0.53
NUP58-207ENST00000465068 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
NUP58-207ENST00000465068 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
NUP58-207ENST00000465068 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
NUP58-207ENST00000465068 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
NUP58-207ENST00000465068 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
NUP58-207ENST00000465068 HMOX1P09601 288 aa18.34■□□□□ 0.53
NUP58-207ENST00000465068 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
NUP58-207ENST00000465068 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
NUP58-207ENST00000465068 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
NUP58-207ENST00000465068 CCDC125Q86Z20 511 aa18.33■□□□□ 0.52
NUP58-207ENST00000465068 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
NUP58-207ENST00000465068 KCNQ2O43526 872 aa18.31■□□□□ 0.52
NUP58-207ENST00000465068 TRIM37O94972 964 aa18.31■□□□□ 0.52
NUP58-207ENST00000465068 PHKG2P15735 406 aa18.31■□□□□ 0.52
NUP58-207ENST00000465068 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
NUP58-207ENST00000465068 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
NUP58-207ENST00000465068 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
NUP58-207ENST00000465068 FCHSD2O94868 740 aa18.3■□□□□ 0.52
NUP58-207ENST00000465068 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
NUP58-207ENST00000465068 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
NUP58-207ENST00000465068 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
NUP58-207ENST00000465068 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
NUP58-207ENST00000465068 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
NUP58-207ENST00000465068 NUDCQ9Y266 331 aa18.29■□□□□ 0.52
NUP58-207ENST00000465068 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
NUP58-207ENST00000465068 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
NUP58-207ENST00000465068 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
NUP58-207ENST00000465068 SBF2Q86WG5 1849 aa18.28■□□□□ 0.52
NUP58-207ENST00000465068 IFNL2Q8IZJ0 200 aa18.27■□□□□ 0.52
NUP58-207ENST00000465068 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
NUP58-207ENST00000465068 DEFB132Q7Z7B7 95 aa18.26■□□□□ 0.51
NUP58-207ENST00000465068 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
NUP58-207ENST00000465068 ANP32CO43423 234 aa18.25■□□□□ 0.51
NUP58-207ENST00000465068 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
NUP58-207ENST00000465068 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
NUP58-207ENST00000465068 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
NUP58-207ENST00000465068 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
NUP58-207ENST00000465068 ZNF530Q6P9A1 599 aaPredicted RBP18.24■□□□□ 0.51
NUP58-207ENST00000465068 PROM2Q8N271 834 aa18.24■□□□□ 0.51
NUP58-207ENST00000465068 NHSQ6T4R5 1651 aa18.23■□□□□ 0.51
NUP58-207ENST00000465068 PLSCR1O15162 318 aa18.23■□□□□ 0.51
NUP58-207ENST00000465068 TOGARAM1Q9Y4F4 1720 aa18.23■□□□□ 0.51
NUP58-207ENST00000465068 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
NUP58-207ENST00000465068 PNISRQ8TF01 805 aaKnown RBP18.22■□□□□ 0.51
NUP58-207ENST00000465068 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
NUP58-207ENST00000465068 APBA3O96018 575 aa18.21■□□□□ 0.51
NUP58-207ENST00000465068 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
NUP58-207ENST00000465068 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
NUP58-207ENST00000465068 LGR6Q9HBX8 967 aa18.21■□□□□ 0.51
NUP58-207ENST00000465068 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
NUP58-207ENST00000465068 PIGBQ92521 554 aa18.2■□□□□ 0.5
NUP58-207ENST00000465068 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
NUP58-207ENST00000465068 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
NUP58-207ENST00000465068 MPRIPQ6WCQ1 1025 aa18.19■□□□□ 0.5
NUP58-207ENST00000465068 IL17REQ8NFR9 667 aa18.19■□□□□ 0.5
NUP58-207ENST00000465068 EZH2Q15910 746 aaKnown RBP18.18■□□□□ 0.5
NUP58-207ENST00000465068 GAS2L2Q8NHY3 880 aa18.18■□□□□ 0.5
NUP58-207ENST00000465068 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
NUP58-207ENST00000465068 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
NUP58-207ENST00000465068 BAG6P46379 1132 aa18.17■□□□□ 0.5
NUP58-207ENST00000465068 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
NUP58-207ENST00000465068 C1orf141Q5JVX7 400 aa18.16■□□□□ 0.5
NUP58-207ENST00000465068 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
NUP58-207ENST00000465068 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
NUP58-207ENST00000465068 MRC1P22897 1456 aa18.14■□□□□ 0.5
NUP58-207ENST00000465068 BTAF1O14981 1849 aa18.14■□□□□ 0.5
NUP58-207ENST00000465068 GNAT3A8MTJ3 354 aa18.14■□□□□ 0.49
NUP58-207ENST00000465068 SYTL4Q96C24 671 aaPredicted RBP18.14■□□□□ 0.49
NUP58-207ENST00000465068 RGPD3A6NKT7 1758 aaPredicted RBP18.13■□□□□ 0.49
NUP58-207ENST00000465068 RGPD4Q7Z3J3 1758 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 HTATSF1O43719 755 aaKnown RBP18.13■□□□□ 0.49
NUP58-207ENST00000465068 NFE2L2Q16236 605 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
NUP58-207ENST00000465068 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 ATG3Q9NT62 314 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
NUP58-207ENST00000465068 ITGB4P16144 1822 aa18.12■□□□□ 0.49
NUP58-207ENST00000465068 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
NUP58-207ENST00000465068 RUNDC1Q96C34 613 aa18.12■□□□□ 0.49
NUP58-207ENST00000465068 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
NUP58-207ENST00000465068 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
NUP58-207ENST00000465068 SRCAPQ6ZRS2 3230 aa18.11■□□□□ 0.49
NUP58-207ENST00000465068 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
NUP58-207ENST00000465068 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
NUP58-207ENST00000465068 CCDC146Q8IYE0 955 aa18.11■□□□□ 0.49
NUP58-207ENST00000465068 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
NUP58-207ENST00000465068 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
NUP58-207ENST00000465068 RREB1Q92766 1687 aa18.1■□□□□ 0.49
NUP58-207ENST00000465068 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
NUP58-207ENST00000465068 CABP4P57796 275 aa18.09■□□□□ 0.49
NUP58-207ENST00000465068 DCTN1Q14203 1278 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms