RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 NR1H3Q13133 447 aa10.61□□□□□ -0.71
UBR4-209ENST00000465036 GMCL1Q96IK5 515 aa10.61□□□□□ -0.71
UBR4-209ENST00000465036 GSK3AP49840 483 aa10.6□□□□□ -0.71
UBR4-209ENST00000465036 ZNF385CQ66K41 422 aaPredicted RBP10.6□□□□□ -0.71
UBR4-209ENST00000465036 ADAMTS8Q9UP79 889 aa10.6□□□□□ -0.71
UBR4-209ENST00000465036 CDC14CA4D256 554 aa10.59□□□□□ -0.71
UBR4-209ENST00000465036 RNF225M0QZC1 329 aaPredicted RBP10.59□□□□□ -0.71
UBR4-209ENST00000465036 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
UBR4-209ENST00000465036 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
UBR4-209ENST00000465036 BRPF1P55201 1214 aaPredicted RBP10.58□□□□□ -0.72
UBR4-209ENST00000465036 APBB1O00213 710 aa10.56□□□□□ -0.72
UBR4-209ENST00000465036 GPR37L1O60883 481 aa10.56□□□□□ -0.72
UBR4-209ENST00000465036 A0A1W2PRU2 124 aa10.55□□□□□ -0.72
UBR4-209ENST00000465036 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
UBR4-209ENST00000465036 SRSF11Q05519 484 aaKnown RBP10.55□□□□□ -0.72
UBR4-209ENST00000465036 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
UBR4-209ENST00000465036 MTMR14Q8NCE2 650 aa10.55□□□□□ -0.72
UBR4-209ENST00000465036 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
UBR4-209ENST00000465036 CLN3Q13286 438 aa10.54□□□□□ -0.72
UBR4-209ENST00000465036 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
UBR4-209ENST00000465036 CYP2U1Q7Z449 544 aa10.54□□□□□ -0.72
UBR4-209ENST00000465036 TRIM22Q8IYM9 498 aa10.54□□□□□ -0.72
UBR4-209ENST00000465036 SVOPQ8N4V2 548 aa10.54□□□□□ -0.72
UBR4-209ENST00000465036 CUEDC1Q9NWM3 386 aaPredicted RBP10.54□□□□□ -0.72
UBR4-209ENST00000465036 TRAK2O60296 914 aa10.53□□□□□ -0.72
UBR4-209ENST00000465036 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
UBR4-209ENST00000465036 DYRK1BQ9Y463 629 aa10.53□□□□□ -0.72
UBR4-209ENST00000465036 RASSF7Q02833 373 aa10.52□□□□□ -0.73
UBR4-209ENST00000465036 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
UBR4-209ENST00000465036 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
UBR4-209ENST00000465036 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
UBR4-209ENST00000465036 MEN1O00255 615 aa10.51□□□□□ -0.73
UBR4-209ENST00000465036 ADAMTS2O95450 1211 aa10.51□□□□□ -0.73
UBR4-209ENST00000465036 GAS6Q14393 721 aa10.51□□□□□ -0.73
UBR4-209ENST00000465036 ZNF837Q96EG3 531 aaPredicted RBP10.51□□□□□ -0.73
UBR4-209ENST00000465036 NLRP3Q96P20 1036 aa10.51□□□□□ -0.73
UBR4-209ENST00000465036 RHOQP17081 205 aa10.5□□□□□ -0.73
UBR4-209ENST00000465036 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
UBR4-209ENST00000465036 H7C1W4 665 aa10.49□□□□□ -0.73
UBR4-209ENST00000465036 GDF11O95390 407 aa10.49□□□□□ -0.73
UBR4-209ENST00000465036 SCTRP47872 440 aa10.49□□□□□ -0.73
UBR4-209ENST00000465036 FOXR1Q6PIV2 292 aa10.49□□□□□ -0.73
UBR4-209ENST00000465036 PCDHB11Q9Y5F2 797 aa10.49□□□□□ -0.73
UBR4-209ENST00000465036 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
UBR4-209ENST00000465036 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
UBR4-209ENST00000465036 GNRH1P01148 92 aa10.47□□□□□ -0.73
UBR4-209ENST00000465036 DBN1Q16643 649 aa10.47□□□□□ -0.73
UBR4-209ENST00000465036 NBPF10Q6P3W6 841 aaKnown RBP10.47□□□□□ -0.73
UBR4-209ENST00000465036 NBPF15Q8N660 670 aa10.47□□□□□ -0.73
UBR4-209ENST00000465036 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
UBR4-209ENST00000465036 POU4F2Q12837 409 aa10.46□□□□□ -0.73
UBR4-209ENST00000465036 LYPD4Q6UWN0 246 aa10.46□□□□□ -0.73
UBR4-209ENST00000465036 KCTD17Q8N5Z5 321 aa10.46□□□□□ -0.73
UBR4-209ENST00000465036 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
UBR4-209ENST00000465036 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
UBR4-209ENST00000465036 CELA2BP08218 269 aaPredicted RBP10.45□□□□□ -0.74
UBR4-209ENST00000465036 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
UBR4-209ENST00000465036 SCARF2Q96GP6 870 aaPredicted RBP10.45□□□□□ -0.74
UBR4-209ENST00000465036 MARSP56192 900 aaKnown RBP10.44□□□□□ -0.74
UBR4-209ENST00000465036 MAP3K10Q02779 954 aa10.44□□□□□ -0.74
UBR4-209ENST00000465036 ESYT1Q9BSJ8 1104 aa10.44□□□□□ -0.74
UBR4-209ENST00000465036 ARHGEF10LQ9HCE6 1279 aa10.44□□□□□ -0.74
UBR4-209ENST00000465036 ENAMQ9NRM1 1142 aa10.44□□□□□ -0.74
UBR4-209ENST00000465036 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
UBR4-209ENST00000465036 TAS1R3Q7RTX0 852 aa10.43□□□□□ -0.74
UBR4-209ENST00000465036 LRRC4BQ9NT99 713 aa10.43□□□□□ -0.74
UBR4-209ENST00000465036 PRM3Q9NNZ6 103 aa10.42□□□□□ -0.74
UBR4-209ENST00000465036 HRH3Q9Y5N1 445 aa10.42□□□□□ -0.74
UBR4-209ENST00000465036 DNMT3AQ9Y6K1 912 aaPredicted RBP10.42□□□□□ -0.74
UBR4-209ENST00000465036 WASLO00401 505 aaPredicted RBP10.41□□□□□ -0.74
UBR4-209ENST00000465036 MYCP01106 439 aaPredicted RBP10.41□□□□□ -0.74
UBR4-209ENST00000465036 F11P03951 625 aa10.41□□□□□ -0.74
UBR4-209ENST00000465036 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
UBR4-209ENST00000465036 TRERF1Q96PN7 1200 aa10.41□□□□□ -0.74
UBR4-209ENST00000465036 TIMMDC1Q9NPL8 285 aa10.41□□□□□ -0.74
UBR4-209ENST00000465036 IGF1RP08069 1367 aa10.4□□□□□ -0.74
UBR4-209ENST00000465036 CENPCQ03188 943 aa10.4□□□□□ -0.74
UBR4-209ENST00000465036 XAGE2Q96GT9 111 aa10.4□□□□□ -0.74
UBR4-209ENST00000465036 CCDC85AQ96PX6 553 aaPredicted RBP10.4□□□□□ -0.74
UBR4-209ENST00000465036 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
UBR4-209ENST00000465036 IL2RAP01589 272 aa10.39□□□□□ -0.75
UBR4-209ENST00000465036 IRS1P35568 1242 aa10.39□□□□□ -0.75
UBR4-209ENST00000465036 EIF4G2P78344 907 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBR4-209ENST00000465036 PHTF2Q8N3S3 785 aa10.39□□□□□ -0.75
UBR4-209ENST00000465036 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
UBR4-209ENST00000465036 GPR25O00155 361 aa10.38□□□□□ -0.75
UBR4-209ENST00000465036 IGHA1P01876 353 aa10.38□□□□□ -0.75
UBR4-209ENST00000465036 BCRP11274 1271 aa10.38□□□□□ -0.75
UBR4-209ENST00000465036 FOXK2Q01167 660 aa10.38□□□□□ -0.75
UBR4-209ENST00000465036 CDCA7Q9BWT1 371 aaPredicted RBP10.38□□□□□ -0.75
UBR4-209ENST00000465036 CHIC2Q9UKJ5 165 aa10.38□□□□□ -0.75
UBR4-209ENST00000465036 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
UBR4-209ENST00000465036 ESCO1Q5FWF5 840 aa10.37□□□□□ -0.75
UBR4-209ENST00000465036 CFHR5Q9BXR6 569 aa10.37□□□□□ -0.75
UBR4-209ENST00000465036 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
UBR4-209ENST00000465036 NUCKS1Q9H1E3 243 aaKnown RBP10.37□□□□□ -0.75
UBR4-209ENST00000465036 TBC1D2BQ9UPU7 963 aa10.37□□□□□ -0.75
UBR4-209ENST00000465036 A0A1B0GTH6 734 aa10.36□□□□□ -0.75
UBR4-209ENST00000465036 USP4Q13107 963 aa10.36□□□□□ -0.75
UBR4-209ENST00000465036 LBRQ14739 615 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms