RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 MSL1Q68DK7 614 aa23.49■■□□□ 1.35
COPS6-205ENST00000465027 MSH5O43196 834 aa23.48■■□□□ 1.35
COPS6-205ENST00000465027 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
COPS6-205ENST00000465027 COL23A1Q86Y22 540 aaPredicted RBP23.47■■□□□ 1.35
COPS6-205ENST00000465027 IP6K1Q92551 441 aa23.47■■□□□ 1.35
COPS6-205ENST00000465027 ANKRD36BQ8N2N9 1353 aa23.47■■□□□ 1.35
COPS6-205ENST00000465027 LY75O60449 1722 aa23.47■■□□□ 1.35
COPS6-205ENST00000465027 FBLN1P23142 703 aa23.46■■□□□ 1.35
COPS6-205ENST00000465027 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
COPS6-205ENST00000465027 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
COPS6-205ENST00000465027 CCNL1Q9UK58 526 aaPredicted RBP23.46■■□□□ 1.35
COPS6-205ENST00000465027 EDC4Q6P2E9 1401 aaKnown RBP23.45■■□□□ 1.34
COPS6-205ENST00000465027 HDGFL2Q7Z4V5 671 aaPredicted RBP23.45■■□□□ 1.34
COPS6-205ENST00000465027 A0A1W2PP64 1363 aa23.44■■□□□ 1.34
COPS6-205ENST00000465027 FAM208AQ9UK61 1670 aaKnown RBP23.44■■□□□ 1.34
COPS6-205ENST00000465027 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
COPS6-205ENST00000465027 GRIN3BO60391 1043 aa23.43■■□□□ 1.34
COPS6-205ENST00000465027 MEGF6O75095 1541 aa23.43■■□□□ 1.34
COPS6-205ENST00000465027 ZCRB1Q8TBF4 217 aaKnown RBP23.41■■□□□ 1.34
COPS6-205ENST00000465027 MAP3K19Q56UN5 1328 aa23.4■■□□□ 1.34
COPS6-205ENST00000465027 ZNF526Q8TF50 670 aaPredicted RBP23.4■■□□□ 1.34
COPS6-205ENST00000465027 WWC3Q9ULE0 1092 aa23.39■■□□□ 1.33
COPS6-205ENST00000465027 HOXC9P31274 260 aa23.38■■□□□ 1.33
COPS6-205ENST00000465027 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
COPS6-205ENST00000465027 TERF2IPQ9NYB0 399 aa23.37■■□□□ 1.33
COPS6-205ENST00000465027 CARD11Q9BXL7 1154 aa23.36■■□□□ 1.33
COPS6-205ENST00000465027 USP47Q96K76 1375 aa23.36■■□□□ 1.33
COPS6-205ENST00000465027 AMPHP49418 695 aa23.35■■□□□ 1.33
COPS6-205ENST00000465027 GPBP1L1Q9HC44 474 aaPredicted RBP23.35■■□□□ 1.33
COPS6-205ENST00000465027 SMIM5Q71RC9 77 aa23.34■■□□□ 1.33
COPS6-205ENST00000465027 C5P01031 1676 aa23.33■■□□□ 1.33
COPS6-205ENST00000465027 ADCY9O60503 1353 aa23.33■■□□□ 1.33
COPS6-205ENST00000465027 NBPF6Q5VWK0 638 aa23.33■■□□□ 1.33
COPS6-205ENST00000465027 NBPF4Q96M43 638 aa23.33■■□□□ 1.33
COPS6-205ENST00000465027 AMIGO3Q86WK7 504 aa23.32■■□□□ 1.32
COPS6-205ENST00000465027 COG3Q96JB2 828 aa23.31■■□□□ 1.32
COPS6-205ENST00000465027 CD2APQ9Y5K6 639 aa23.31■■□□□ 1.32
COPS6-205ENST00000465027 HSPA6P17066 643 aa23.3■■□□□ 1.32
COPS6-205ENST00000465027 RRS1Q15050 365 aaKnown RBP23.3■■□□□ 1.32
COPS6-205ENST00000465027 PALLDQ8WX93 1383 aa23.27■■□□□ 1.32
COPS6-205ENST00000465027 TAF1LQ8IZX4 1826 aa23.27■■□□□ 1.32
COPS6-205ENST00000465027 TOGARAM1Q9Y4F4 1720 aa23.26■■□□□ 1.31
COPS6-205ENST00000465027 MPRIPQ6WCQ1 1025 aa23.26■■□□□ 1.31
COPS6-205ENST00000465027 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
COPS6-205ENST00000465027 PHF14O94880 888 aa23.25■■□□□ 1.31
COPS6-205ENST00000465027 RAPGEF4Q8WZA2 1011 aa23.24■■□□□ 1.31
COPS6-205ENST00000465027 C4BP0C0L5 1744 aa23.23■■□□□ 1.31
COPS6-205ENST00000465027 TATP17735 454 aaPredicted RBP23.22■■□□□ 1.31
COPS6-205ENST00000465027 FLAD1Q8NFF5 587 aa23.22■■□□□ 1.31
COPS6-205ENST00000465027 GGNBP2Q9H3C7 697 aa23.22■■□□□ 1.31
COPS6-205ENST00000465027 RTL1A6NKG5 1358 aa23.22■■□□□ 1.31
COPS6-205ENST00000465027 KIF3CO14782 793 aa23.21■■□□□ 1.31
COPS6-205ENST00000465027 CYP27B1O15528 508 aa23.21■■□□□ 1.31
COPS6-205ENST00000465027 AK7Q96M32 723 aa23.21■■□□□ 1.31
COPS6-205ENST00000465027 PUS7Q96PZ0 661 aaKnown RBP23.21■■□□□ 1.31
COPS6-205ENST00000465027 TESK2Q96S53 571 aa23.21■■□□□ 1.31
COPS6-205ENST00000465027 HSP90AB2PQ58FF8 381 aa23.2■■□□□ 1.3
COPS6-205ENST00000465027 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
COPS6-205ENST00000465027 PCDH11XQ9BZA7 1347 aa23.19■■□□□ 1.3
COPS6-205ENST00000465027 PCDH11YQ9BZA8 1340 aa23.19■■□□□ 1.3
COPS6-205ENST00000465027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
COPS6-205ENST00000465027 UBR3Q6ZT12 1888 aa23.19■■□□□ 1.3
COPS6-205ENST00000465027 ITGB4P16144 1822 aa23.17■■□□□ 1.3
COPS6-205ENST00000465027 ST20-MTHFSA0A0A6YYL1 179 aa23.17■■□□□ 1.3
COPS6-205ENST00000465027 FYB1O15117 783 aa23.17■■□□□ 1.3
COPS6-205ENST00000465027 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
COPS6-205ENST00000465027 PIGBQ92521 554 aa23.16■■□□□ 1.3
COPS6-205ENST00000465027 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
COPS6-205ENST00000465027 SMARCC1Q92922 1105 aaPredicted RBP23.13■■□□□ 1.29
COPS6-205ENST00000465027 INSRP06213 1382 aa23.13■■□□□ 1.29
COPS6-205ENST00000465027 MAP2P11137 1827 aaKnown RBP23.12■■□□□ 1.29
COPS6-205ENST00000465027 ITPK1Q13572 414 aa23.1■■□□□ 1.29
COPS6-205ENST00000465027 CICQ96RK0 1608 aaPredicted RBP23.09■■□□□ 1.29
COPS6-205ENST00000465027 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
COPS6-205ENST00000465027 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
COPS6-205ENST00000465027 SSFA2P28290 1259 aa23.09■■□□□ 1.29
COPS6-205ENST00000465027 SIK1P57059 783 aa23.09■■□□□ 1.29
COPS6-205ENST00000465027 FLT4P35916 1363 aa23.09■■□□□ 1.29
COPS6-205ENST00000465027 GNPATO15228 680 aa23.08■■□□□ 1.29
COPS6-205ENST00000465027 ASAP1Q9ULH1 1129 aa23.08■■□□□ 1.29
COPS6-205ENST00000465027 EMILIN1Q9Y6C2 1016 aa23.08■■□□□ 1.29
COPS6-205ENST00000465027 TONSLQ96HA7 1378 aa23.08■■□□□ 1.29
COPS6-205ENST00000465027 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.29
COPS6-205ENST00000465027 MMP10P09238 476 aa23.07■■□□□ 1.28
COPS6-205ENST00000465027 KIAA1551Q9HCM1 1747 aa23.07■■□□□ 1.28
COPS6-205ENST00000465027 NSD3Q9BZ95 1437 aa23.07■■□□□ 1.28
COPS6-205ENST00000465027 N4BP2Q86UW6 1770 aaPredicted RBP23.06■■□□□ 1.28
COPS6-205ENST00000465027 DNAJC5GQ8N7S2 189 aa23.06■■□□□ 1.28
COPS6-205ENST00000465027 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
COPS6-205ENST00000465027 HMGB2P26583 209 aaKnown RBP23.05■■□□□ 1.28
COPS6-205ENST00000465027 APLP1P51693 650 aa23.05■■□□□ 1.28
COPS6-205ENST00000465027 NKX1-1Q15270 411 aaPredicted RBP23.05■■□□□ 1.28
COPS6-205ENST00000465027 NMRK2Q9NPI5 230 aa23.05■■□□□ 1.28
COPS6-205ENST00000465027 BCS1LQ9Y276 419 aa23.05■■□□□ 1.28
COPS6-205ENST00000465027 KIF20BQ96Q89 1820 aa23.05■■□□□ 1.28
COPS6-205ENST00000465027 ATP6V1AP38606 617 aa23.03■■□□□ 1.28
COPS6-205ENST00000465027 HTRA3P83110 453 aa23.02■■□□□ 1.28
COPS6-205ENST00000465027 TMOD3Q9NYL9 352 aa23.02■■□□□ 1.28
COPS6-205ENST00000465027 PPM1GO15355 546 aaPredicted RBP23.01■■□□□ 1.27
COPS6-205ENST00000465027 TOMM70O94826 608 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms