RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
RPUSD3-211ENST00000464783 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.19
RPUSD3-211ENST00000464783 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
RPUSD3-211ENST00000464783 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
RPUSD3-211ENST00000464783 IL13P35225 146 aa16.2■□□□□ 0.18
RPUSD3-211ENST00000464783 PARD3Q8TEW0 1356 aa16.2■□□□□ 0.18
RPUSD3-211ENST00000464783 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
RPUSD3-211ENST00000464783 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
RPUSD3-211ENST00000464783 BAG6P46379 1132 aa16.19■□□□□ 0.18
RPUSD3-211ENST00000464783 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
RPUSD3-211ENST00000464783 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
RPUSD3-211ENST00000464783 COL3A1P02461 1466 aaPredicted RBP16.18■□□□□ 0.18
RPUSD3-211ENST00000464783 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
RPUSD3-211ENST00000464783 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
RPUSD3-211ENST00000464783 U2SURPO15042 1029 aaKnown RBP16.17■□□□□ 0.18
RPUSD3-211ENST00000464783 RALBP1Q15311 655 aa16.17■□□□□ 0.18
RPUSD3-211ENST00000464783 BCL9O00512 1426 aa16.17■□□□□ 0.18
RPUSD3-211ENST00000464783 APBA3O96018 575 aa16.16■□□□□ 0.18
RPUSD3-211ENST00000464783 DEFB132Q7Z7B7 95 aa16.16■□□□□ 0.18
RPUSD3-211ENST00000464783 AEBP1Q8IUX7 1158 aa16.16■□□□□ 0.18
RPUSD3-211ENST00000464783 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
RPUSD3-211ENST00000464783 BTAF1O14981 1849 aa16.15■□□□□ 0.18
RPUSD3-211ENST00000464783 HMOX1P09601 288 aa16.15■□□□□ 0.18
RPUSD3-211ENST00000464783 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
RPUSD3-211ENST00000464783 NUDCQ9Y266 331 aa16.14■□□□□ 0.17
RPUSD3-211ENST00000464783 KDRP35968 1356 aa16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 EN1Q05925 392 aaPredicted RBP16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 SYTL4Q96C24 671 aaPredicted RBP16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 RGPD3A6NKT7 1758 aaPredicted RBP16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 RGPD4Q7Z3J3 1758 aa16.13■□□□□ 0.17
RPUSD3-211ENST00000464783 ITGB4P16144 1822 aa16.12■□□□□ 0.17
RPUSD3-211ENST00000464783 CYP27B1O15528 508 aa16.12■□□□□ 0.17
RPUSD3-211ENST00000464783 AMOTQ4VCS5 1084 aa16.12■□□□□ 0.17
RPUSD3-211ENST00000464783 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
RPUSD3-211ENST00000464783 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
RPUSD3-211ENST00000464783 VIRMAQ69YN4 1812 aaKnown RBP16.11■□□□□ 0.17
RPUSD3-211ENST00000464783 KCNQ2O43526 872 aa16.11■□□□□ 0.17
RPUSD3-211ENST00000464783 PTF1AQ7RTS3 328 aa16.11■□□□□ 0.17
RPUSD3-211ENST00000464783 IFNL2Q8IZJ0 200 aa16.11■□□□□ 0.17
RPUSD3-211ENST00000464783 ZNF530Q6P9A1 599 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-211ENST00000464783 RREB1Q92766 1687 aa16.1■□□□□ 0.17
RPUSD3-211ENST00000464783 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 PHKG2P15735 406 aa16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 PRIM1P49642 420 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 C1orf141Q5JVX7 400 aa16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-211ENST00000464783 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.17
RPUSD3-211ENST00000464783 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
RPUSD3-211ENST00000464783 SCN11AQ9UI33 1791 aa16.06■□□□□ 0.16
RPUSD3-211ENST00000464783 PLSCR1O15162 318 aa16.06■□□□□ 0.16
RPUSD3-211ENST00000464783 HSP90AB1P08238 724 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-211ENST00000464783 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
RPUSD3-211ENST00000464783 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-211ENST00000464783 MPRIPQ6WCQ1 1025 aa16.05■□□□□ 0.16
RPUSD3-211ENST00000464783 ANP32CO43423 234 aa16.04■□□□□ 0.16
RPUSD3-211ENST00000464783 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
RPUSD3-211ENST00000464783 RSPH6AQ9H0K4 717 aa16.04■□□□□ 0.16
RPUSD3-211ENST00000464783 LY75O60449 1722 aa16.03■□□□□ 0.16
RPUSD3-211ENST00000464783 NEFMP07197 916 aa16.03■□□□□ 0.16
RPUSD3-211ENST00000464783 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-211ENST00000464783 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
RPUSD3-211ENST00000464783 FCHSD2O94868 740 aa16.02■□□□□ 0.16
RPUSD3-211ENST00000464783 AKAP4Q5JQC9 854 aa16.02■□□□□ 0.16
RPUSD3-211ENST00000464783 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
RPUSD3-211ENST00000464783 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
RPUSD3-211ENST00000464783 KDM6AO15550 1401 aaPredicted RBP16.01■□□□□ 0.15
RPUSD3-211ENST00000464783 CABP4P57796 275 aa16■□□□□ 0.15
RPUSD3-211ENST00000464783 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
RPUSD3-211ENST00000464783 NBPF14Q5TI25 921 aa16■□□□□ 0.15
RPUSD3-211ENST00000464783 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
RPUSD3-211ENST00000464783 DLG5Q8TDM6 1919 aa16■□□□□ 0.15
RPUSD3-211ENST00000464783 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
RPUSD3-211ENST00000464783 PIGBQ92521 554 aa15.99■□□□□ 0.15
RPUSD3-211ENST00000464783 PHACTR3Q96KR7 559 aa15.99■□□□□ 0.15
RPUSD3-211ENST00000464783 MAP3K5Q99683 1374 aa15.99■□□□□ 0.15
RPUSD3-211ENST00000464783 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
RPUSD3-211ENST00000464783 SMARCC1Q92922 1105 aaPredicted RBP15.98■□□□□ 0.15
RPUSD3-211ENST00000464783 PALLDQ8WX93 1383 aa15.98■□□□□ 0.15
RPUSD3-211ENST00000464783 GNAT3A8MTJ3 354 aa15.97■□□□□ 0.15
RPUSD3-211ENST00000464783 PROM2Q8N271 834 aa15.97■□□□□ 0.15
RPUSD3-211ENST00000464783 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
RPUSD3-211ENST00000464783 C5P01031 1676 aa15.96■□□□□ 0.15
RPUSD3-211ENST00000464783 PSDA5PKW4 1024 aaPredicted RBP15.96■□□□□ 0.15
RPUSD3-211ENST00000464783 SLC27A3Q5K4L6 730 aa15.96■□□□□ 0.15
RPUSD3-211ENST00000464783 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
RPUSD3-211ENST00000464783 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.14
RPUSD3-211ENST00000464783 RNMTO43148 476 aaKnown RBP15.95■□□□□ 0.14
RPUSD3-211ENST00000464783 R3HDM1Q15032 1099 aaKnown RBP15.95■□□□□ 0.14
RPUSD3-211ENST00000464783 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
RPUSD3-211ENST00000464783 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
RPUSD3-211ENST00000464783 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
RPUSD3-211ENST00000464783 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
RPUSD3-211ENST00000464783 STK32BQ9NY57 414 aa15.94■□□□□ 0.14
RPUSD3-211ENST00000464783 ASAP1Q9ULH1 1129 aa15.94■□□□□ 0.14
RPUSD3-211ENST00000464783 MRC1P22897 1456 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms