RNA–Protein interactions for RNA: ENST00000464710.1

IL6-208, Transcript of interleukin 6, human

TSL 4

Gene IL6, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IL6-208	ENST00000464710	CCER2	I3L3R5	266 aa		11.08	□□□□□ -0.64
IL6-208	ENST00000464710	C1orf141	Q5JVX7	400 aa		11.08	□□□□□ -0.64
IL6-208	ENST00000464710	CCDC146	Q8IYE0	955 aa		11.08	□□□□□ -0.64
IL6-208	ENST00000464710	PNISR	Q8TF01	805 aa	Known RBP	11.08	□□□□□ -0.64
IL6-208	ENST00000464710	NRAP	Q86VF7	1730 aa		11.08	□□□□□ -0.64
IL6-208	ENST00000464710	MAPK8IP3	Q9UPT6	1336 aa		11.08	□□□□□ -0.64
IL6-208	ENST00000464710	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.07	□□□□□ -0.64
IL6-208	ENST00000464710	IFNL2	Q8IZJ0	200 aa		11.07	□□□□□ -0.64
IL6-208	ENST00000464710	RSPH6A	Q9H0K4	717 aa		11.07	□□□□□ -0.64
IL6-208	ENST00000464710	GLI3	P10071	1580 aa		11.07	□□□□□ -0.64
IL6-208	ENST00000464710	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.06	□□□□□ -0.64
IL6-208	ENST00000464710	NEUROD2	Q15784	382 aa		11.06	□□□□□ -0.64
IL6-208	ENST00000464710	MTHFSD	Q2M296	383 aa	Known RBP	11.06	□□□□□ -0.64
IL6-208	ENST00000464710	ILDR2	Q71H61	639 aa		11.06	□□□□□ -0.64
IL6-208	ENST00000464710	MARCH10	Q8NA82	808 aa	Predicted RBP	11.06	□□□□□ -0.64
IL6-208	ENST00000464710	PHACTR3	Q96KR7	559 aa		11.06	□□□□□ -0.64
IL6-208	ENST00000464710	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
IL6-208	ENST00000464710	COL3A1	P02461	1466 aa	Predicted RBP	11.06	□□□□□ -0.64
IL6-208	ENST00000464710	SENP3-EIF4A1	A0A087X0R7	540 aa		11.05	□□□□□ -0.64
IL6-208	ENST00000464710	FAM196A	Q6ZSG2	479 aa		11.05	□□□□□ -0.64
IL6-208	ENST00000464710	GAS2L2	Q8NHY3	880 aa		11.05	□□□□□ -0.64
IL6-208	ENST00000464710	RUNDC1	Q96C34	613 aa		11.05	□□□□□ -0.64
IL6-208	ENST00000464710	ACSBG1	Q96GR2	724 aa		11.05	□□□□□ -0.64
IL6-208	ENST00000464710	RGPD2	P0DJD1	1756 aa		11.05	□□□□□ -0.64
IL6-208	ENST00000464710	RGS12	O14924	1447 aa		11.04	□□□□□ -0.64
IL6-208	ENST00000464710	CYP27B1	O15528	508 aa		11.04	□□□□□ -0.64
IL6-208	ENST00000464710	AKAP4	Q5JQC9	854 aa		11.04	□□□□□ -0.64
IL6-208	ENST00000464710	RTF1	Q92541	710 aa	Known RBP	11.04	□□□□□ -0.64
IL6-208	ENST00000464710	SYTL4	Q96C24	671 aa	Predicted RBP	11.04	□□□□□ -0.64
IL6-208	ENST00000464710	PCDH11X	Q9BZA7	1347 aa		11.04	□□□□□ -0.64
IL6-208	ENST00000464710	PCDH11Y	Q9BZA8	1340 aa		11.04	□□□□□ -0.64
IL6-208	ENST00000464710	MEGF6	O75095	1541 aa		11.04	□□□□□ -0.64
IL6-208	ENST00000464710	DISP2	A7MBM2	1401 aa		11.03	□□□□□ -0.64
IL6-208	ENST00000464710	HSP90AB1	P08238	724 aa	Known RBP	11.03	□□□□□ -0.64
IL6-208	ENST00000464710	PHKG2	P15735	406 aa		11.03	□□□□□ -0.64
IL6-208	ENST00000464710	RIPK4	P57078	832 aa		11.03	□□□□□ -0.64
IL6-208	ENST00000464710	MPRIP	Q6WCQ1	1025 aa		11.03	□□□□□ -0.64
IL6-208	ENST00000464710	PLEKHF1	Q96S99	279 aa		11.03	□□□□□ -0.64
IL6-208	ENST00000464710	RRP7A	Q9Y3A4	280 aa	Known RBP	11.03	□□□□□ -0.64
IL6-208	ENST00000464710	SALL2	Q9Y467	1007 aa	Predicted RBP	11.03	□□□□□ -0.64
IL6-208	ENST00000464710	KDR	P35968	1356 aa		11.03	□□□□□ -0.64
IL6-208	ENST00000464710	OVOS2	A0A0G2JMS6	1433 aa		11.02	□□□□□ -0.64
IL6-208	ENST00000464710	GNAT3	A8MTJ3	354 aa		11.02	□□□□□ -0.65
IL6-208	ENST00000464710	APAF1	O14727	1248 aa		11.02	□□□□□ -0.65
IL6-208	ENST00000464710	SF3B2	Q13435	895 aa	Known RBP	11.02	□□□□□ -0.65
IL6-208	ENST00000464710	FAM208A	Q9UK61	1670 aa	Known RBP	11.01	□□□□□ -0.65
IL6-208	ENST00000464710	TRIM37	O94972	964 aa		11.01	□□□□□ -0.65
IL6-208	ENST00000464710	TMPO	P42166	694 aa	Known RBP	11.01	□□□□□ -0.65
IL6-208	ENST00000464710	PRIM1	P49642	420 aa	Known RBP	11.01	□□□□□ -0.65
IL6-208	ENST00000464710	NFE2L2	Q16236	605 aa		11.01	□□□□□ -0.65
IL6-208	ENST00000464710	LGR6	Q9HBX8	967 aa		11.01	□□□□□ -0.65
IL6-208	ENST00000464710	NCAPD2	Q15021	1401 aa		11.01	□□□□□ -0.65
IL6-208	ENST00000464710	CABP4	P57796	275 aa		11	□□□□□ -0.65
IL6-208	ENST00000464710	DCAF5	Q96JK2	942 aa		11	□□□□□ -0.65
IL6-208	ENST00000464710	RNMT	O43148	476 aa	Known RBP	10.99	□□□□□ -0.65
IL6-208	ENST00000464710	KCNQ2	O43526	872 aa		10.99	□□□□□ -0.65
IL6-208	ENST00000464710	APBA3	O96018	575 aa		10.99	□□□□□ -0.65
IL6-208	ENST00000464710	DCTN1	Q14203	1278 aa		10.99	□□□□□ -0.65
IL6-208	ENST00000464710	NKX1-1	Q15270	411 aa	Predicted RBP	10.99	□□□□□ -0.65
IL6-208	ENST00000464710	MCM10	Q7L590	875 aa		10.99	□□□□□ -0.65
IL6-208	ENST00000464710	TNS2	Q63HR2	1409 aa		10.99	□□□□□ -0.65
IL6-208	ENST00000464710	TEF	Q10587	303 aa		10.98	□□□□□ -0.65
IL6-208	ENST00000464710	NFATC2IP	Q8NCF5	419 aa		10.98	□□□□□ -0.65
IL6-208	ENST00000464710	IL17RE	Q8NFR9	667 aa		10.98	□□□□□ -0.65
IL6-208	ENST00000464710	TMOD3	Q9NYL9	352 aa		10.98	□□□□□ -0.65
IL6-208	ENST00000464710	ERVV-2	B6SEH9	535 aa		10.97	□□□□□ -0.65
IL6-208	ENST00000464710	HTATSF1	O43719	755 aa	Known RBP	10.97	□□□□□ -0.65
IL6-208	ENST00000464710	LMOD3	Q0VAK6	560 aa		10.97	□□□□□ -0.65
IL6-208	ENST00000464710	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.97	□□□□□ -0.65
IL6-208	ENST00000464710	LAS1L	Q9Y4W2	734 aa	Known RBP	10.97	□□□□□ -0.65
IL6-208	ENST00000464710	RGPD1	P0DJD0	1748 aa		10.97	□□□□□ -0.65
IL6-208	ENST00000464710	THSD7A	Q9UPZ6	1657 aa		10.96	□□□□□ -0.65
IL6-208	ENST00000464710	MAP3K5	Q99683	1374 aa		10.96	□□□□□ -0.65
IL6-208	ENST00000464710	PTF1A	Q7RTS3	328 aa		10.96	□□□□□ -0.65
IL6-208	ENST00000464710	THUMPD2	Q9BTF0	503 aa	Known RBP	10.96	□□□□□ -0.65
IL6-208	ENST00000464710	PARP4	Q9UKK3	1724 aa	Known RBP	10.95	□□□□□ -0.66
IL6-208	ENST00000464710	PLEKHG2	Q9H7P9	1386 aa		10.95	□□□□□ -0.66
IL6-208	ENST00000464710	CCDC125	Q86Z20	511 aa		10.95	□□□□□ -0.66
IL6-208	ENST00000464710	PIGB	Q92521	554 aa		10.95	□□□□□ -0.66
IL6-208	ENST00000464710	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.95	□□□□□ -0.66
IL6-208	ENST00000464710	SLC52A2	Q9HAB3	445 aa		10.95	□□□□□ -0.66
IL6-208	ENST00000464710	BRWD3	Q6RI45	1802 aa		10.95	□□□□□ -0.66
IL6-208	ENST00000464710	KAT6B	Q8WYB5	2073 aa		10.94	□□□□□ -0.66
IL6-208	ENST00000464710	BTBD11	A6QL63	1104 aa		10.94	□□□□□ -0.66
IL6-208	ENST00000464710	BAG6	P46379	1132 aa		10.94	□□□□□ -0.66
IL6-208	ENST00000464710	TAF7	Q15545	349 aa	Predicted RBP	10.94	□□□□□ -0.66
IL6-208	ENST00000464710	RBM42	Q9BTD8	480 aa	Known RBP	10.94	□□□□□ -0.66
IL6-208	ENST00000464710	TRIM35	Q9UPQ4	493 aa		10.94	□□□□□ -0.66
IL6-208	ENST00000464710	LRRC37A3	O60309	1634 aa		10.94	□□□□□ -0.66
IL6-208	ENST00000464710	EN1	Q05925	392 aa	Predicted RBP	10.93	□□□□□ -0.66
IL6-208	ENST00000464710	SLC39A6	Q13433	755 aa		10.93	□□□□□ -0.66
IL6-208	ENST00000464710	DEFB132	Q7Z7B7	95 aa		10.93	□□□□□ -0.66
IL6-208	ENST00000464710	MIS18A	Q9NYP9	233 aa		10.93	□□□□□ -0.66
IL6-208	ENST00000464710	ASAP1	Q9ULH1	1129 aa		10.93	□□□□□ -0.66
IL6-208	ENST00000464710	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.92	□□□□□ -0.66
IL6-208	ENST00000464710	TTC5	Q8N0Z6	440 aa		10.92	□□□□□ -0.66
IL6-208	ENST00000464710	SMARCC1	Q92922	1105 aa	Predicted RBP	10.92	□□□□□ -0.66
IL6-208	ENST00000464710	ATG3	Q9NT62	314 aa		10.92	□□□□□ -0.66
IL6-208	ENST00000464710	PTCD1	O75127	700 aa	Known RBP	10.91	□□□□□ -0.66
IL6-208	ENST00000464710	CALD1	Q05682	793 aa	Known RBP	10.91	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms