RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 IL2RBP14784 551 aa16.83■□□□□ 0.28
SCAF8-205ENST00000464628 ERBB3P21860 1342 aa16.83■□□□□ 0.28
SCAF8-205ENST00000464628 UBR3Q6ZT12 1888 aa16.83■□□□□ 0.28
SCAF8-205ENST00000464628 NMRK2Q9NPI5 230 aa16.83■□□□□ 0.28
SCAF8-205ENST00000464628 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
SCAF8-205ENST00000464628 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
SCAF8-205ENST00000464628 RBM46Q8TBY0 533 aaKnown RBP16.82■□□□□ 0.28
SCAF8-205ENST00000464628 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
SCAF8-205ENST00000464628 N4BP2Q86UW6 1770 aaPredicted RBP16.82■□□□□ 0.28
SCAF8-205ENST00000464628 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
SCAF8-205ENST00000464628 KDM2AQ9Y2K7 1162 aa16.81■□□□□ 0.28
SCAF8-205ENST00000464628 MON2Q7Z3U7 1717 aa16.81■□□□□ 0.28
SCAF8-205ENST00000464628 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
SCAF8-205ENST00000464628 SOX12O15370 315 aa16.8■□□□□ 0.28
SCAF8-205ENST00000464628 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
SCAF8-205ENST00000464628 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
SCAF8-205ENST00000464628 CABP2Q9NPB3 220 aa16.8■□□□□ 0.28
SCAF8-205ENST00000464628 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
SCAF8-205ENST00000464628 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
SCAF8-205ENST00000464628 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
SCAF8-205ENST00000464628 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
SCAF8-205ENST00000464628 HSPA1AP0DMV8 641 aaKnown RBP16.77■□□□□ 0.28
SCAF8-205ENST00000464628 HSPA1BP0DMV9 641 aaKnown RBP16.77■□□□□ 0.28
SCAF8-205ENST00000464628 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
SCAF8-205ENST00000464628 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
SCAF8-205ENST00000464628 FSTL1Q12841 308 aa16.76■□□□□ 0.27
SCAF8-205ENST00000464628 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
SCAF8-205ENST00000464628 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
SCAF8-205ENST00000464628 PXDNLA1KZ92 1463 aa16.75■□□□□ 0.27
SCAF8-205ENST00000464628 RGPD2P0DJD1 1756 aa16.74■□□□□ 0.27
SCAF8-205ENST00000464628 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
SCAF8-205ENST00000464628 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
SCAF8-205ENST00000464628 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
SCAF8-205ENST00000464628 KCPQ6ZWJ8 1503 aa16.73■□□□□ 0.27
SCAF8-205ENST00000464628 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
SCAF8-205ENST00000464628 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
SCAF8-205ENST00000464628 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
SCAF8-205ENST00000464628 USP47Q96K76 1375 aa16.7■□□□□ 0.26
SCAF8-205ENST00000464628 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
SCAF8-205ENST00000464628 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
SCAF8-205ENST00000464628 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
SCAF8-205ENST00000464628 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
SCAF8-205ENST00000464628 MAP2P11137 1827 aaKnown RBP16.68■□□□□ 0.26
SCAF8-205ENST00000464628 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
SCAF8-205ENST00000464628 SBF1O95248 1867 aa16.68■□□□□ 0.26
SCAF8-205ENST00000464628 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
SCAF8-205ENST00000464628 ITGB4P16144 1822 aa16.68■□□□□ 0.26
SCAF8-205ENST00000464628 MEGF6O75095 1541 aa16.67■□□□□ 0.26
SCAF8-205ENST00000464628 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.25
SCAF8-205ENST00000464628 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
SCAF8-205ENST00000464628 SMIM5Q71RC9 77 aa16.63■□□□□ 0.25
SCAF8-205ENST00000464628 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
SCAF8-205ENST00000464628 C9orf131Q5VYM1 1079 aa16.62■□□□□ 0.25
SCAF8-205ENST00000464628 SMC1BQ8NDV3 1235 aa16.62■□□□□ 0.25
SCAF8-205ENST00000464628 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
SCAF8-205ENST00000464628 PALLDQ8WX93 1383 aa16.62■□□□□ 0.25
SCAF8-205ENST00000464628 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
SCAF8-205ENST00000464628 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
SCAF8-205ENST00000464628 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
SCAF8-205ENST00000464628 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
SCAF8-205ENST00000464628 RRAGCQ9HB90 399 aa16.6■□□□□ 0.25
SCAF8-205ENST00000464628 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
SCAF8-205ENST00000464628 CD163L1Q9NR16 1453 aa16.6■□□□□ 0.25
SCAF8-205ENST00000464628 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
SCAF8-205ENST00000464628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.59■□□□□ 0.25
SCAF8-205ENST00000464628 PHF14O94880 888 aa16.59■□□□□ 0.25
SCAF8-205ENST00000464628 TGFB2P61812 414 aa16.58■□□□□ 0.24
SCAF8-205ENST00000464628 AK7Q96M32 723 aa16.58■□□□□ 0.24
SCAF8-205ENST00000464628 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
SCAF8-205ENST00000464628 A0A0G2JLW4 131 aa16.57■□□□□ 0.24
SCAF8-205ENST00000464628 SSFA2P28290 1259 aa16.57■□□□□ 0.24
SCAF8-205ENST00000464628 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
SCAF8-205ENST00000464628 EVC2Q86UK5 1308 aa16.56■□□□□ 0.24
SCAF8-205ENST00000464628 NME9Q86XW9 330 aa16.56■□□□□ 0.24
SCAF8-205ENST00000464628 VIRMAQ69YN4 1812 aaKnown RBP16.55■□□□□ 0.24
SCAF8-205ENST00000464628 FOXN1O15353 648 aa16.54■□□□□ 0.24
SCAF8-205ENST00000464628 FCHSD2O94868 740 aa16.54■□□□□ 0.24
SCAF8-205ENST00000464628 MMP10P09238 476 aa16.54■□□□□ 0.24
SCAF8-205ENST00000464628 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
SCAF8-205ENST00000464628 IP6K1Q92551 441 aa16.54■□□□□ 0.24
SCAF8-205ENST00000464628 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
SCAF8-205ENST00000464628 RAB3GAP2Q9H2M9 1393 aa16.53■□□□□ 0.24
SCAF8-205ENST00000464628 DPEP1P16444 411 aa16.53■□□□□ 0.24
SCAF8-205ENST00000464628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAF8-205ENST00000464628 KCNA3P22001 575 aa16.52■□□□□ 0.24
SCAF8-205ENST00000464628 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
SCAF8-205ENST00000464628 RNF181Q9P0P0 153 aa16.52■□□□□ 0.24
SCAF8-205ENST00000464628 KDM6AO15550 1401 aaPredicted RBP16.52■□□□□ 0.23
SCAF8-205ENST00000464628 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
SCAF8-205ENST00000464628 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
SCAF8-205ENST00000464628 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
SCAF8-205ENST00000464628 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
SCAF8-205ENST00000464628 DCAF5Q96JK2 942 aa16.5■□□□□ 0.23
SCAF8-205ENST00000464628 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
SCAF8-205ENST00000464628 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
SCAF8-205ENST00000464628 ZNF831Q5JPB2 1677 aa16.47■□□□□ 0.23
SCAF8-205ENST00000464628 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
SCAF8-205ENST00000464628 ABHD8Q96I13 439 aa16.47■□□□□ 0.23
SCAF8-205ENST00000464628 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
SCAF8-205ENST00000464628 EDC4Q6P2E9 1401 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms