RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 LY75O60449 1722 aa18.08■□□□□ 0.48
SLC13A3-208ENST00000464518 GRIN3BO60391 1043 aa18.07■□□□□ 0.48
SLC13A3-208ENST00000464518 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
SLC13A3-208ENST00000464518 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
SLC13A3-208ENST00000464518 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
SLC13A3-208ENST00000464518 L3MBTL2Q969R5 705 aa18.06■□□□□ 0.48
SLC13A3-208ENST00000464518 TUBGCP6Q96RT7 1819 aa18.06■□□□□ 0.48
SLC13A3-208ENST00000464518 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
SLC13A3-208ENST00000464518 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
SLC13A3-208ENST00000464518 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
SLC13A3-208ENST00000464518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
SLC13A3-208ENST00000464518 HDGFL2Q7Z4V5 671 aaPredicted RBP18.02■□□□□ 0.48
SLC13A3-208ENST00000464518 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
SLC13A3-208ENST00000464518 NME9Q86XW9 330 aa18.01■□□□□ 0.47
SLC13A3-208ENST00000464518 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
SLC13A3-208ENST00000464518 IP6K1Q92551 441 aa18.01■□□□□ 0.47
SLC13A3-208ENST00000464518 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
SLC13A3-208ENST00000464518 NSD2O96028 1365 aa18■□□□□ 0.47
SLC13A3-208ENST00000464518 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
SLC13A3-208ENST00000464518 NLGN2Q8NFZ4 835 aa17.99■□□□□ 0.47
SLC13A3-208ENST00000464518 KAT6BQ8WYB5 2073 aa17.99■□□□□ 0.47
SLC13A3-208ENST00000464518 DDX54Q8TDD1 881 aaKnown RBP17.98■□□□□ 0.47
SLC13A3-208ENST00000464518 TERF2IPQ9NYB0 399 aa17.98■□□□□ 0.47
SLC13A3-208ENST00000464518 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
SLC13A3-208ENST00000464518 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
SLC13A3-208ENST00000464518 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
SLC13A3-208ENST00000464518 USP47Q96K76 1375 aa17.96■□□□□ 0.47
SLC13A3-208ENST00000464518 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
SLC13A3-208ENST00000464518 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
SLC13A3-208ENST00000464518 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
SLC13A3-208ENST00000464518 CD2APQ9Y5K6 639 aa17.96■□□□□ 0.47
SLC13A3-208ENST00000464518 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
SLC13A3-208ENST00000464518 SYTL4Q96C24 671 aaPredicted RBP17.95■□□□□ 0.46
SLC13A3-208ENST00000464518 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
SLC13A3-208ENST00000464518 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
SLC13A3-208ENST00000464518 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
SLC13A3-208ENST00000464518 ADCY9O60503 1353 aa17.94■□□□□ 0.46
SLC13A3-208ENST00000464518 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
SLC13A3-208ENST00000464518 C5P01031 1676 aa17.93■□□□□ 0.46
SLC13A3-208ENST00000464518 TMC1Q8TDI8 760 aa17.93■□□□□ 0.46
SLC13A3-208ENST00000464518 POTEHQ6S545 545 aa17.92■□□□□ 0.46
SLC13A3-208ENST00000464518 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
SLC13A3-208ENST00000464518 MEGF6O75095 1541 aa17.92■□□□□ 0.46
SLC13A3-208ENST00000464518 HOXC9P31274 260 aa17.91■□□□□ 0.46
SLC13A3-208ENST00000464518 POLA2Q14181 598 aa17.91■□□□□ 0.46
SLC13A3-208ENST00000464518 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
SLC13A3-208ENST00000464518 GPBP1L1Q9HC44 474 aaPredicted RBP17.91■□□□□ 0.46
SLC13A3-208ENST00000464518 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
SLC13A3-208ENST00000464518 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
SLC13A3-208ENST00000464518 HSPA6P17066 643 aa17.9■□□□□ 0.46
SLC13A3-208ENST00000464518 KCNQ4P56696 695 aa17.9■□□□□ 0.46
SLC13A3-208ENST00000464518 COG3Q96JB2 828 aa17.9■□□□□ 0.46
SLC13A3-208ENST00000464518 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
SLC13A3-208ENST00000464518 TRIM26Q12899 539 aaPredicted RBP17.89■□□□□ 0.45
SLC13A3-208ENST00000464518 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
SLC13A3-208ENST00000464518 TAF1LQ8IZX4 1826 aa17.88■□□□□ 0.45
SLC13A3-208ENST00000464518 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
SLC13A3-208ENST00000464518 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
SLC13A3-208ENST00000464518 AMPHP49418 695 aa17.87■□□□□ 0.45
SLC13A3-208ENST00000464518 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
SLC13A3-208ENST00000464518 RGPD2P0DJD1 1756 aa17.86■□□□□ 0.45
SLC13A3-208ENST00000464518 SIN3AQ96ST3 1273 aa17.86■□□□□ 0.45
SLC13A3-208ENST00000464518 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
SLC13A3-208ENST00000464518 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
SLC13A3-208ENST00000464518 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
SLC13A3-208ENST00000464518 CICQ96RK0 1608 aaPredicted RBP17.84■□□□□ 0.45
SLC13A3-208ENST00000464518 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
SLC13A3-208ENST00000464518 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
SLC13A3-208ENST00000464518 RAPGEF4Q8WZA2 1011 aa17.84■□□□□ 0.45
SLC13A3-208ENST00000464518 CEP350Q5VT06 3117 aa17.84■□□□□ 0.45
SLC13A3-208ENST00000464518 MSL1Q68DK7 614 aa17.83■□□□□ 0.44
SLC13A3-208ENST00000464518 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.44
SLC13A3-208ENST00000464518 TATP17735 454 aaPredicted RBP17.81■□□□□ 0.44
SLC13A3-208ENST00000464518 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
SLC13A3-208ENST00000464518 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
SLC13A3-208ENST00000464518 UBR3Q6ZT12 1888 aa17.8■□□□□ 0.44
SLC13A3-208ENST00000464518 SSFA2P28290 1259 aa17.8■□□□□ 0.44
SLC13A3-208ENST00000464518 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
SLC13A3-208ENST00000464518 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
SLC13A3-208ENST00000464518 INSRP06213 1382 aa17.79■□□□□ 0.44
SLC13A3-208ENST00000464518 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
SLC13A3-208ENST00000464518 AK7Q96M32 723 aa17.79■□□□□ 0.44
SLC13A3-208ENST00000464518 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
SLC13A3-208ENST00000464518 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
SLC13A3-208ENST00000464518 FLT4P35916 1363 aa17.78■□□□□ 0.44
SLC13A3-208ENST00000464518 TESK2Q96S53 571 aa17.77■□□□□ 0.44
SLC13A3-208ENST00000464518 ITGB4P16144 1822 aa17.77■□□□□ 0.43
SLC13A3-208ENST00000464518 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
SLC13A3-208ENST00000464518 KIF3CO14782 793 aa17.76■□□□□ 0.43
SLC13A3-208ENST00000464518 APLP1P51693 650 aa17.76■□□□□ 0.43
SLC13A3-208ENST00000464518 MAP2P11137 1827 aaKnown RBP17.75■□□□□ 0.43
SLC13A3-208ENST00000464518 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
SLC13A3-208ENST00000464518 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
SLC13A3-208ENST00000464518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.74■□□□□ 0.43
SLC13A3-208ENST00000464518 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
SLC13A3-208ENST00000464518 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
SLC13A3-208ENST00000464518 ZNF526Q8TF50 670 aaPredicted RBP17.74■□□□□ 0.43
SLC13A3-208ENST00000464518 PLEKHG2Q9H7P9 1386 aa17.74■□□□□ 0.43
SLC13A3-208ENST00000464518 FYB1O15117 783 aa17.73■□□□□ 0.43
SLC13A3-208ENST00000464518 CYP27B1O15528 508 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms