RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 ERBB3P21860 1342 aa18.26■□□□□ 0.51
SNX17-205ENST00000464279 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
SNX17-205ENST00000464279 NFAT5O94916 1531 aa18.26■□□□□ 0.51
SNX17-205ENST00000464279 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
SNX17-205ENST00000464279 DCAF11Q8TEB1 546 aa18.25■□□□□ 0.51
SNX17-205ENST00000464279 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
SNX17-205ENST00000464279 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
SNX17-205ENST00000464279 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
SNX17-205ENST00000464279 NSD2O96028 1365 aa18.24■□□□□ 0.51
SNX17-205ENST00000464279 DDX54Q8TDD1 881 aaKnown RBP18.23■□□□□ 0.51
SNX17-205ENST00000464279 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
SNX17-205ENST00000464279 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
SNX17-205ENST00000464279 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
SNX17-205ENST00000464279 C10orf71Q711Q0 1435 aa18.2■□□□□ 0.5
SNX17-205ENST00000464279 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
SNX17-205ENST00000464279 USP47Q96K76 1375 aa18.19■□□□□ 0.5
SNX17-205ENST00000464279 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
SNX17-205ENST00000464279 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
SNX17-205ENST00000464279 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
SNX17-205ENST00000464279 FAM161AQ3B820 660 aa18.17■□□□□ 0.5
SNX17-205ENST00000464279 C5P01031 1676 aa18.17■□□□□ 0.5
SNX17-205ENST00000464279 TTC21AQ8NDW8 1320 aa18.17■□□□□ 0.5
SNX17-205ENST00000464279 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
SNX17-205ENST00000464279 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
SNX17-205ENST00000464279 ARHGAP27Q6ZUM4 889 aa18.16■□□□□ 0.5
SNX17-205ENST00000464279 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
SNX17-205ENST00000464279 BCS1LQ9Y276 419 aa18.16■□□□□ 0.5
SNX17-205ENST00000464279 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
SNX17-205ENST00000464279 KCPQ6ZWJ8 1503 aa18.15■□□□□ 0.5
SNX17-205ENST00000464279 C9orf131Q5VYM1 1079 aa18.14■□□□□ 0.49
SNX17-205ENST00000464279 CENPJQ9HC77 1338 aaPredicted RBP18.13■□□□□ 0.49
SNX17-205ENST00000464279 AK7Q96M32 723 aa18.12■□□□□ 0.49
SNX17-205ENST00000464279 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
SNX17-205ENST00000464279 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
SNX17-205ENST00000464279 RRAGCQ9HB90 399 aa18.11■□□□□ 0.49
SNX17-205ENST00000464279 TNRC6CQ9HCJ0 1690 aaKnown RBP18.1■□□□□ 0.49
SNX17-205ENST00000464279 PHF14O94880 888 aa18.1■□□□□ 0.49
SNX17-205ENST00000464279 TGFB2P61812 414 aa18.09■□□□□ 0.49
SNX17-205ENST00000464279 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
SNX17-205ENST00000464279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.08■□□□□ 0.48
SNX17-205ENST00000464279 AMIGO3Q86WK7 504 aa18.08■□□□□ 0.48
SNX17-205ENST00000464279 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
SNX17-205ENST00000464279 C4BP0C0L5 1744 aa18.08■□□□□ 0.48
SNX17-205ENST00000464279 TOGARAM1Q9Y4F4 1720 aa18.08■□□□□ 0.48
SNX17-205ENST00000464279 PALLDQ8WX93 1383 aa18.07■□□□□ 0.48
SNX17-205ENST00000464279 KIAA1551Q9HCM1 1747 aa18.07■□□□□ 0.48
SNX17-205ENST00000464279 FCHSD2O94868 740 aa18.07■□□□□ 0.48
SNX17-205ENST00000464279 A0A0G2JLW4 131 aa18.06■□□□□ 0.48
SNX17-205ENST00000464279 TAF1LQ8IZX4 1826 aa18.05■□□□□ 0.48
SNX17-205ENST00000464279 LTN1O94822 1766 aa18.05■□□□□ 0.48
SNX17-205ENST00000464279 SSFA2P28290 1259 aa18.05■□□□□ 0.48
SNX17-205ENST00000464279 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
SNX17-205ENST00000464279 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
SNX17-205ENST00000464279 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
SNX17-205ENST00000464279 USP31Q70CQ4 1352 aa18.04■□□□□ 0.48
SNX17-205ENST00000464279 KIAA1210Q9ULL0 1709 aa18.04■□□□□ 0.48
SNX17-205ENST00000464279 FOXN1O15353 648 aa18.04■□□□□ 0.48
SNX17-205ENST00000464279 MMP10P09238 476 aa18.04■□□□□ 0.48
SNX17-205ENST00000464279 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
SNX17-205ENST00000464279 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
SNX17-205ENST00000464279 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
SNX17-205ENST00000464279 FAM208AQ9UK61 1670 aaKnown RBP18.03■□□□□ 0.48
SNX17-205ENST00000464279 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
SNX17-205ENST00000464279 MLLT1Q03111 559 aaPredicted RBP18.02■□□□□ 0.48
SNX17-205ENST00000464279 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
SNX17-205ENST00000464279 DPEP1P16444 411 aa18.01■□□□□ 0.47
SNX17-205ENST00000464279 ABHD8Q96I13 439 aa18.01■□□□□ 0.47
SNX17-205ENST00000464279 MEGF6O75095 1541 aa18■□□□□ 0.47
SNX17-205ENST00000464279 CTCFP49711 727 aaPredicted RBP18■□□□□ 0.47
SNX17-205ENST00000464279 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
SNX17-205ENST00000464279 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
SNX17-205ENST00000464279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNX17-205ENST00000464279 AIDAQ96BJ3 306 aa17.99■□□□□ 0.47
SNX17-205ENST00000464279 MKRN1Q9UHC7 482 aaKnown RBP17.98■□□□□ 0.47
SNX17-205ENST00000464279 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
SNX17-205ENST00000464279 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
SNX17-205ENST00000464279 NME9Q86XW9 330 aa17.97■□□□□ 0.47
SNX17-205ENST00000464279 IP6K1Q92551 441 aa17.97■□□□□ 0.47
SNX17-205ENST00000464279 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
SNX17-205ENST00000464279 ZC3H4Q9UPT8 1303 aaKnown RBP17.97■□□□□ 0.47
SNX17-205ENST00000464279 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
SNX17-205ENST00000464279 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
SNX17-205ENST00000464279 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
SNX17-205ENST00000464279 CREBZFQ9NS37 354 aa17.96■□□□□ 0.47
SNX17-205ENST00000464279 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
SNX17-205ENST00000464279 BRCA1P38398 1863 aaKnown RBP17.96■□□□□ 0.47
SNX17-205ENST00000464279 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
SNX17-205ENST00000464279 MON2Q7Z3U7 1717 aa17.95■□□□□ 0.46
SNX17-205ENST00000464279 GNPATO15228 680 aa17.94■□□□□ 0.46
SNX17-205ENST00000464279 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
SNX17-205ENST00000464279 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
SNX17-205ENST00000464279 KCNA3P22001 575 aa17.92■□□□□ 0.46
SNX17-205ENST00000464279 RGS19P49795 217 aa17.92■□□□□ 0.46
SNX17-205ENST00000464279 DALRD3Q5D0E6 543 aaKnown RBP17.92■□□□□ 0.46
SNX17-205ENST00000464279 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
SNX17-205ENST00000464279 GLTPD2A6NH11 291 aa17.91■□□□□ 0.46
SNX17-205ENST00000464279 LBX1P52954 281 aa17.91■□□□□ 0.46
SNX17-205ENST00000464279 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
SNX17-205ENST00000464279 CNTNAP1P78357 1384 aa17.91■□□□□ 0.46
SNX17-205ENST00000464279 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms