RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DDX19BQ9UMR2 479 aa27.73■■■□□ 2.03
PDLIM2-216ENST00000464275 C8orf58Q8NAV2 365 aa27.72■■■□□ 2.03
PDLIM2-216ENST00000464275 RTF1Q92541 710 aaKnown RBP27.72■■■□□ 2.03
PDLIM2-216ENST00000464275 HTATSF1O43719 755 aaKnown RBP27.71■■■□□ 2.03
PDLIM2-216ENST00000464275 LTV1Q96GA3 475 aaPredicted RBP27.71■■■□□ 2.03
PDLIM2-216ENST00000464275 XPCQ01831 940 aaPredicted RBP27.71■■■□□ 2.03
PDLIM2-216ENST00000464275 ARHGAP45Q92619 1136 aa27.71■■■□□ 2.03
PDLIM2-216ENST00000464275 HAP1P54257 671 aaPredicted RBP27.7■■■□□ 2.03
PDLIM2-216ENST00000464275 USP19O94966 1318 aa27.7■■■□□ 2.02
PDLIM2-216ENST00000464275 KIAA0232Q92628 1395 aa27.7■■■□□ 2.02
PDLIM2-216ENST00000464275 PCDHB15Q9Y5E8 787 aa27.69■■■□□ 2.02
PDLIM2-216ENST00000464275 SKAP1Q86WV1 359 aa27.69■■■□□ 2.02
PDLIM2-216ENST00000464275 LMTK3Q96Q04 1460 aa27.68■■■□□ 2.02
PDLIM2-216ENST00000464275 ELL2O00472 640 aaPredicted RBP27.68■■■□□ 2.02
PDLIM2-216ENST00000464275 GCP02774 474 aa27.68■■■□□ 2.02
PDLIM2-216ENST00000464275 PDE4AP27815 886 aa27.68■■■□□ 2.02
PDLIM2-216ENST00000464275 ITPRIPQ8IWB1 547 aa27.68■■■□□ 2.02
PDLIM2-216ENST00000464275 TMEM57Q8N5G2 664 aa27.67■■■□□ 2.02
PDLIM2-216ENST00000464275 BACH2Q9BYV9 841 aa27.66■■■□□ 2.02
PDLIM2-216ENST00000464275 RGPD5Q99666 1765 aa27.66■■■□□ 2.02
PDLIM2-216ENST00000464275 KDM4FA0A1W2PPD8 638 aa27.66■■■□□ 2.02
PDLIM2-216ENST00000464275 RWDD1Q9H446 243 aaPredicted RBP27.66■■■□□ 2.02
PDLIM2-216ENST00000464275 CADPS2Q86UW7 1296 aa27.65■■■□□ 2.02
PDLIM2-216ENST00000464275 ARHGEF25Q86VW2 580 aa27.65■■■□□ 2.02
PDLIM2-216ENST00000464275 LMOD2Q6P5Q4 547 aa27.64■■■□□ 2.02
PDLIM2-216ENST00000464275 GNAT3A8MTJ3 354 aa27.64■■■□□ 2.01
PDLIM2-216ENST00000464275 MSH6P52701 1360 aa27.63■■■□□ 2.01
PDLIM2-216ENST00000464275 CAMTA1Q9Y6Y1 1673 aa27.63■■■□□ 2.01
PDLIM2-216ENST00000464275 ZBTB7CA1YPR0 619 aa27.62■■■□□ 2.01
PDLIM2-216ENST00000464275 MAP3K5Q99683 1374 aa27.62■■■□□ 2.01
PDLIM2-216ENST00000464275 VIRMAQ69YN4 1812 aaKnown RBP27.62■■■□□ 2.01
PDLIM2-216ENST00000464275 ZBTB47Q9UFB7 747 aaPredicted RBP27.61■■■□□ 2.01
PDLIM2-216ENST00000464275 NBPF6Q5VWK0 638 aa27.6■■■□□ 2.01
PDLIM2-216ENST00000464275 NBPF4Q96M43 638 aa27.6■■■□□ 2.01
PDLIM2-216ENST00000464275 MED1Q15648 1581 aaPredicted RBP27.6■■■□□ 2.01
PDLIM2-216ENST00000464275 CACNA1FO60840 1977 aa27.6■■■□□ 2.01
PDLIM2-216ENST00000464275 USHBP1Q8N6Y0 703 aa27.6■■■□□ 2.01
PDLIM2-216ENST00000464275 CHMP4BQ9H444 224 aaKnown RBP27.6■■■□□ 2.01
PDLIM2-216ENST00000464275 LMO7Q8WWI1 1683 aa27.59■■■□□ 2.01
PDLIM2-216ENST00000464275 API5Q9BZZ5 524 aaKnown RBP27.59■■■□□ 2.01
PDLIM2-216ENST00000464275 ZBTB40Q9NUA8 1239 aa27.59■■■□□ 2.01
PDLIM2-216ENST00000464275 TSPYL4Q9UJ04 414 aa27.59■■■□□ 2.01
PDLIM2-216ENST00000464275 NCAPD2Q15021 1401 aa27.58■■■□□ 2.01
PDLIM2-216ENST00000464275 RGS3P49796 1198 aa27.58■■■□□ 2.01
PDLIM2-216ENST00000464275 ABCC4O15439 1325 aa27.58■■■□□ 2
PDLIM2-216ENST00000464275 NPHP3Q7Z494 1330 aa27.57■■■□□ 2
PDLIM2-216ENST00000464275 HDAC1Q13547 482 aaPredicted RBP27.56■■■□□ 2
PDLIM2-216ENST00000464275 KRT24Q2M2I5 525 aa27.55■■■□□ 2
PDLIM2-216ENST00000464275 BABAM1Q9NWV8 329 aa27.55■■■□□ 2
PDLIM2-216ENST00000464275 CRYBG1Q9Y4K1 1723 aa27.55■■■□□ 2
PDLIM2-216ENST00000464275 MIS18AQ9NYP9 233 aa27.54■■■□□ 2
PDLIM2-216ENST00000464275 IL17REQ8NFR9 667 aa27.53■■■□□ 2
PDLIM2-216ENST00000464275 ANKRD24Q8TF21 1146 aa27.53■■■□□ 2
PDLIM2-216ENST00000464275 TNS3Q68CZ2 1445 aa27.52■■■□□ 2
PDLIM2-216ENST00000464275 PXDNQ92626 1479 aa27.52■■■□□ 2
PDLIM2-216ENST00000464275 COL18A1P39060 1754 aa27.52■■■□□ 2
PDLIM2-216ENST00000464275 PLEKHG5O94827 1062 aa27.52■■■□□ 2
PDLIM2-216ENST00000464275 FAM161AQ3B820 660 aa27.52■■■□□ 2
PDLIM2-216ENST00000464275 LRRC59Q96AG4 307 aaKnown RBP27.52■■■□□ 2
PDLIM2-216ENST00000464275 ZBTB7BO15156 539 aaPredicted RBP27.51■■□□□ 1.99
PDLIM2-216ENST00000464275 FAM208AQ9UK61 1670 aaKnown RBP27.5■■□□□ 1.99
PDLIM2-216ENST00000464275 PDZRN3Q9UPQ7 1066 aa27.5■■□□□ 1.99
PDLIM2-216ENST00000464275 TAF7Q15545 349 aaPredicted RBP27.49■■□□□ 1.99
PDLIM2-216ENST00000464275 DDX17Q92841 729 aaKnown RBP27.49■■□□□ 1.99
PDLIM2-216ENST00000464275 KDM3BQ7LBC6 1761 aa27.49■■□□□ 1.99
PDLIM2-216ENST00000464275 PTPRCP08575 1304 aa27.49■■□□□ 1.99
PDLIM2-216ENST00000464275 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
PDLIM2-216ENST00000464275 SOS1Q07889 1333 aaPredicted RBP27.48■■□□□ 1.99
PDLIM2-216ENST00000464275 ABCC6O95255 1503 aa27.48■■□□□ 1.99
PDLIM2-216ENST00000464275 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
PDLIM2-216ENST00000464275 AMOTQ4VCS5 1084 aa27.48■■□□□ 1.99
PDLIM2-216ENST00000464275 AXIN2Q9Y2T1 843 aa27.47■■□□□ 1.99
PDLIM2-216ENST00000464275 C8orf34Q49A92 452 aa27.46■■□□□ 1.99
PDLIM2-216ENST00000464275 RGS12O14924 1447 aa27.45■■□□□ 1.99
PDLIM2-216ENST00000464275 ZC3H6P61129 1189 aaKnown RBP27.45■■□□□ 1.98
PDLIM2-216ENST00000464275 AKAP4Q5JQC9 854 aa27.45■■□□□ 1.98
PDLIM2-216ENST00000464275 DDRGK1Q96HY6 314 aa27.45■■□□□ 1.98
PDLIM2-216ENST00000464275 SPATA31A3Q5VYP0 1347 aa27.45■■□□□ 1.98
PDLIM2-216ENST00000464275 INTS3Q68E01 1043 aaKnown RBP27.44■■□□□ 1.98
PDLIM2-216ENST00000464275 SMC5Q8IY18 1101 aa27.43■■□□□ 1.98
PDLIM2-216ENST00000464275 ERBB3P21860 1342 aa27.43■■□□□ 1.98
PDLIM2-216ENST00000464275 SLC4A2P04920 1241 aa27.42■■□□□ 1.98
PDLIM2-216ENST00000464275 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
PDLIM2-216ENST00000464275 ZNF335Q9H4Z2 1342 aaPredicted RBP27.41■■□□□ 1.98
PDLIM2-216ENST00000464275 BRINP3Q76B58 766 aa27.41■■□□□ 1.98
PDLIM2-216ENST00000464275 OVOS2A0A0G2JMS6 1433 aa27.41■■□□□ 1.98
PDLIM2-216ENST00000464275 SIPA1L3O60292 1781 aaPredicted RBP27.4■■□□□ 1.98
PDLIM2-216ENST00000464275 STK31Q9BXU1 1019 aa27.39■■□□□ 1.98
PDLIM2-216ENST00000464275 N4BP2Q86UW6 1770 aaPredicted RBP27.39■■□□□ 1.97
PDLIM2-216ENST00000464275 ADAMTS7Q9UKP4 1686 aa27.39■■□□□ 1.97
PDLIM2-216ENST00000464275 CCDC30Q5VVM6 783 aa27.39■■□□□ 1.97
PDLIM2-216ENST00000464275 C1orf141Q5JVX7 400 aa27.38■■□□□ 1.97
PDLIM2-216ENST00000464275 LGR6Q9HBX8 967 aa27.38■■□□□ 1.97
PDLIM2-216ENST00000464275 NPM2Q86SE8 214 aaKnown RBP27.37■■□□□ 1.97
PDLIM2-216ENST00000464275 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
PDLIM2-216ENST00000464275 CPDO75976 1380 aa27.35■■□□□ 1.97
PDLIM2-216ENST00000464275 SCN11AQ9UI33 1791 aa27.35■■□□□ 1.97
PDLIM2-216ENST00000464275 CABLES1Q8TDN4 633 aa27.35■■□□□ 1.97
PDLIM2-216ENST00000464275 RNMTO43148 476 aaKnown RBP27.34■■□□□ 1.97
PDLIM2-216ENST00000464275 TEFQ10587 303 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms