RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 NBPF4Q96M43 638 aa10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 BCL11BQ9C0K0 894 aaPredicted RBP10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 PPP1R1BQ9UD71 204 aaPredicted RBP10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 NCAPD2Q15021 1401 aa10.16□□□□□ -0.78
THUMPD3-208ENST00000464045 PLEKHG2Q9H7P9 1386 aa10.15□□□□□ -0.78
THUMPD3-208ENST00000464045 NPC1L1Q9UHC9 1359 aa10.15□□□□□ -0.78
THUMPD3-208ENST00000464045 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
THUMPD3-208ENST00000464045 NBPF14Q5TI25 921 aa10.15□□□□□ -0.78
THUMPD3-208ENST00000464045 NUP188Q5SRE5 1749 aa10.15□□□□□ -0.78
THUMPD3-208ENST00000464045 PLSCR1O15162 318 aa10.14□□□□□ -0.79
THUMPD3-208ENST00000464045 PPM1GO15355 546 aaPredicted RBP10.14□□□□□ -0.79
THUMPD3-208ENST00000464045 RAPGEF4Q8WZA2 1011 aa10.14□□□□□ -0.79
THUMPD3-208ENST00000464045 KAT6BQ8WYB5 2073 aa10.14□□□□□ -0.79
THUMPD3-208ENST00000464045 MEGF6O75095 1541 aa10.13□□□□□ -0.79
THUMPD3-208ENST00000464045 RREB1Q92766 1687 aa10.13□□□□□ -0.79
THUMPD3-208ENST00000464045 TATP17735 454 aaPredicted RBP10.13□□□□□ -0.79
THUMPD3-208ENST00000464045 TNNT2P45379 298 aaPredicted RBP10.13□□□□□ -0.79
THUMPD3-208ENST00000464045 ZCRB1Q8TBF4 217 aaKnown RBP10.13□□□□□ -0.79
THUMPD3-208ENST00000464045 RGPD3A6NKT7 1758 aaPredicted RBP10.12□□□□□ -0.79
THUMPD3-208ENST00000464045 RGPD4Q7Z3J3 1758 aa10.12□□□□□ -0.79
THUMPD3-208ENST00000464045 YY1P25490 414 aa10.12□□□□□ -0.79
THUMPD3-208ENST00000464045 PDGFDQ9GZP0 370 aaPredicted RBP10.12□□□□□ -0.79
THUMPD3-208ENST00000464045 ANO8Q9HCE9 1232 aaPredicted RBP10.12□□□□□ -0.79
THUMPD3-208ENST00000464045 PCDH11XQ9BZA7 1347 aa10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 PCDH11YQ9BZA8 1340 aa10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 EIF4A2Q14240 407 aaKnown RBP10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 USHBP1Q8N6Y0 703 aa10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 EYA1Q99502 592 aa10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 MAP2P11137 1827 aaKnown RBP10.11□□□□□ -0.79
THUMPD3-208ENST00000464045 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
THUMPD3-208ENST00000464045 NHSQ6T4R5 1651 aa10.1□□□□□ -0.79
THUMPD3-208ENST00000464045 KCNQ2O43526 872 aa10.1□□□□□ -0.79
THUMPD3-208ENST00000464045 ZBTB7AO95365 584 aa10.1□□□□□ -0.79
THUMPD3-208ENST00000464045 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
THUMPD3-208ENST00000464045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.79
THUMPD3-208ENST00000464045 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
THUMPD3-208ENST00000464045 RGPD2P0DJD1 1756 aa10.09□□□□□ -0.79
THUMPD3-208ENST00000464045 SPG7Q9UQ90 795 aa10.09□□□□□ -0.79
THUMPD3-208ENST00000464045 ATF5Q9Y2D1 282 aaPredicted RBP10.09□□□□□ -0.79
THUMPD3-208ENST00000464045 UTRNP46939 3433 aa10.08□□□□□ -0.8
THUMPD3-208ENST00000464045 CC2D1BQ5T0F9 858 aaKnown RBP10.08□□□□□ -0.8
THUMPD3-208ENST00000464045 ACSBG1Q96GR2 724 aa10.08□□□□□ -0.8
THUMPD3-208ENST00000464045 ZEB1P37275 1124 aaPredicted RBP10.07□□□□□ -0.8
THUMPD3-208ENST00000464045 MTHFSP49914 203 aa10.07□□□□□ -0.8
THUMPD3-208ENST00000464045 PROM2Q8N271 834 aa10.07□□□□□ -0.8
THUMPD3-208ENST00000464045 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
THUMPD3-208ENST00000464045 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
THUMPD3-208ENST00000464045 KDRP35968 1356 aa10.06□□□□□ -0.8
THUMPD3-208ENST00000464045 CYP27B1O15528 508 aa10.06□□□□□ -0.8
THUMPD3-208ENST00000464045 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
THUMPD3-208ENST00000464045 IL13P35225 146 aa10.06□□□□□ -0.8
THUMPD3-208ENST00000464045 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
THUMPD3-208ENST00000464045 TXNRD1Q16881 649 aa10.06□□□□□ -0.8
THUMPD3-208ENST00000464045 HMGB2P26583 209 aaKnown RBP10.05□□□□□ -0.8
THUMPD3-208ENST00000464045 PRIM1P49642 420 aaKnown RBP10.05□□□□□ -0.8
THUMPD3-208ENST00000464045 AMOTQ4VCS5 1084 aa10.05□□□□□ -0.8
THUMPD3-208ENST00000464045 SLC27A3Q5K4L6 730 aa10.05□□□□□ -0.8
THUMPD3-208ENST00000464045 PLEKHO1Q53GL0 409 aaPredicted RBP10.04□□□□□ -0.8
THUMPD3-208ENST00000464045 IFNL2Q8IZJ0 200 aa10.04□□□□□ -0.8
THUMPD3-208ENST00000464045 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
THUMPD3-208ENST00000464045 STK32BQ9NY57 414 aa10.04□□□□□ -0.8
THUMPD3-208ENST00000464045 BTAF1O14981 1849 aa10.03□□□□□ -0.8
THUMPD3-208ENST00000464045 DIAPH1O60610 1272 aaKnown RBP10.03□□□□□ -0.8
THUMPD3-208ENST00000464045 HSP90AB1P08238 724 aaKnown RBP10.03□□□□□ -0.8
THUMPD3-208ENST00000464045 PHKG2P15735 406 aa10.03□□□□□ -0.8
THUMPD3-208ENST00000464045 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
THUMPD3-208ENST00000464045 DOT1LQ8TEK3 1739 aa10.03□□□□□ -0.8
THUMPD3-208ENST00000464045 CASZ1Q86V15 1759 aa10.02□□□□□ -0.81
THUMPD3-208ENST00000464045 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
THUMPD3-208ENST00000464045 CFAP53Q96M91 514 aa10.02□□□□□ -0.81
THUMPD3-208ENST00000464045 COL3A1P02461 1466 aaPredicted RBP10.02□□□□□ -0.81
THUMPD3-208ENST00000464045 GOLGB1Q14789 3259 aaKnown RBP10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 PTGER2P43116 358 aa10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 KCNQ4P56696 695 aa10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 SLC15A2Q16348 729 aa10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 SMARCC1Q92922 1105 aaPredicted RBP10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 DCAF5Q96JK2 942 aa10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
THUMPD3-208ENST00000464045 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
THUMPD3-208ENST00000464045 NPM3O75607 178 aaKnown RBP10□□□□□ -0.81
THUMPD3-208ENST00000464045 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
THUMPD3-208ENST00000464045 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
THUMPD3-208ENST00000464045 PAPPAQ13219 1627 aa10□□□□□ -0.81
THUMPD3-208ENST00000464045 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 C1orf141Q5JVX7 400 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 MPRIPQ6WCQ1 1025 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 PIGBQ92521 554 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 TMOD3Q9NYL9 352 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 PALLDQ8WX93 1383 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
THUMPD3-208ENST00000464045 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 ZNF827Q17R98 1081 aa9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 AKAP4Q5JQC9 854 aa9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 SYT17Q9BSW7 474 aa9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 CCNL1Q9UK58 526 aaPredicted RBP9.98□□□□□ -0.81
THUMPD3-208ENST00000464045 NUDCQ9Y266 331 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms