RNA–Protein interactions for RNA: ENST00000464044.1

LST1-219, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 278 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-219ENST00000464044 HMGB2P26583 209 aaKnown RBP18.55■□□□□ 0.56
LST1-219ENST00000464044 WNK3Q9BYP7 1800 aa18.54■□□□□ 0.56
LST1-219ENST00000464044 PLSCR1O15162 318 aa18.54■□□□□ 0.56
LST1-219ENST00000464044 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
LST1-219ENST00000464044 PEAK1Q9H792 1746 aa18.53■□□□□ 0.56
LST1-219ENST00000464044 EP400Q96L91 3159 aa18.53■□□□□ 0.56
LST1-219ENST00000464044 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
LST1-219ENST00000464044 AMOTQ4VCS5 1084 aa18.52■□□□□ 0.56
LST1-219ENST00000464044 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
LST1-219ENST00000464044 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
LST1-219ENST00000464044 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.56
LST1-219ENST00000464044 CAMKK2Q96RR4 588 aa18.52■□□□□ 0.56
LST1-219ENST00000464044 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.55
LST1-219ENST00000464044 EZH2Q15910 746 aaKnown RBP18.51■□□□□ 0.55
LST1-219ENST00000464044 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
LST1-219ENST00000464044 HSP90AB1P08238 724 aaKnown RBP18.5■□□□□ 0.55
LST1-219ENST00000464044 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
LST1-219ENST00000464044 IL13P35225 146 aa18.49■□□□□ 0.55
LST1-219ENST00000464044 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
LST1-219ENST00000464044 MEGF6O75095 1541 aa18.49■□□□□ 0.55
LST1-219ENST00000464044 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
LST1-219ENST00000464044 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
LST1-219ENST00000464044 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
LST1-219ENST00000464044 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
LST1-219ENST00000464044 KCNQ2O43526 872 aa18.46■□□□□ 0.55
LST1-219ENST00000464044 C1orf141Q5JVX7 400 aa18.46■□□□□ 0.55
LST1-219ENST00000464044 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
LST1-219ENST00000464044 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
LST1-219ENST00000464044 RALBP1Q15311 655 aa18.45■□□□□ 0.54
LST1-219ENST00000464044 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
LST1-219ENST00000464044 CYP27B1O15528 508 aa18.43■□□□□ 0.54
LST1-219ENST00000464044 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
LST1-219ENST00000464044 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
LST1-219ENST00000464044 NEFMP07197 916 aa18.42■□□□□ 0.54
LST1-219ENST00000464044 TXNRD1Q16881 649 aa18.42■□□□□ 0.54
LST1-219ENST00000464044 SLC27A3Q5K4L6 730 aa18.42■□□□□ 0.54
LST1-219ENST00000464044 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
LST1-219ENST00000464044 TNS1Q9HBL0 1735 aaKnown RBP18.42■□□□□ 0.54
LST1-219ENST00000464044 SBF2Q86WG5 1849 aa18.42■□□□□ 0.54
LST1-219ENST00000464044 PHKG2P15735 406 aa18.41■□□□□ 0.54
LST1-219ENST00000464044 MPRIPQ6WCQ1 1025 aa18.41■□□□□ 0.54
LST1-219ENST00000464044 STK32BQ9NY57 414 aa18.41■□□□□ 0.54
LST1-219ENST00000464044 PTF1AQ7RTS3 328 aa18.4■□□□□ 0.54
LST1-219ENST00000464044 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
LST1-219ENST00000464044 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
LST1-219ENST00000464044 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
LST1-219ENST00000464044 HMOX1P09601 288 aa18.39■□□□□ 0.53
LST1-219ENST00000464044 R3HDM1Q15032 1099 aaKnown RBP18.39■□□□□ 0.53
LST1-219ENST00000464044 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
LST1-219ENST00000464044 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
LST1-219ENST00000464044 KDRP35968 1356 aa18.39■□□□□ 0.53
LST1-219ENST00000464044 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
LST1-219ENST00000464044 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
LST1-219ENST00000464044 PSDA5PKW4 1024 aaPredicted RBP18.37■□□□□ 0.53
LST1-219ENST00000464044 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
LST1-219ENST00000464044 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
LST1-219ENST00000464044 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
LST1-219ENST00000464044 CABP4P57796 275 aa18.36■□□□□ 0.53
LST1-219ENST00000464044 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
LST1-219ENST00000464044 RGPD3A6NKT7 1758 aaPredicted RBP18.35■□□□□ 0.53
LST1-219ENST00000464044 RGPD4Q7Z3J3 1758 aa18.35■□□□□ 0.53
LST1-219ENST00000464044 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
LST1-219ENST00000464044 FCHSD2O94868 740 aa18.34■□□□□ 0.53
LST1-219ENST00000464044 PROM2Q8N271 834 aa18.34■□□□□ 0.53
LST1-219ENST00000464044 PKD1L3Q7Z443 1732 aa18.34■□□□□ 0.53
LST1-219ENST00000464044 PIGBQ92521 554 aa18.33■□□□□ 0.52
LST1-219ENST00000464044 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
LST1-219ENST00000464044 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
LST1-219ENST00000464044 BTAF1O14981 1849 aa18.3■□□□□ 0.52
LST1-219ENST00000464044 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
LST1-219ENST00000464044 DOT1LQ8TEK3 1739 aa18.29■□□□□ 0.52
LST1-219ENST00000464044 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
LST1-219ENST00000464044 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
LST1-219ENST00000464044 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
LST1-219ENST00000464044 TFCP2L1Q9NZI6 479 aa18.29■□□□□ 0.52
LST1-219ENST00000464044 RREB1Q92766 1687 aa18.28■□□□□ 0.52
LST1-219ENST00000464044 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
LST1-219ENST00000464044 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
LST1-219ENST00000464044 COL3A1P02461 1466 aaPredicted RBP18.27■□□□□ 0.52
LST1-219ENST00000464044 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
LST1-219ENST00000464044 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
LST1-219ENST00000464044 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
LST1-219ENST00000464044 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
LST1-219ENST00000464044 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
LST1-219ENST00000464044 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
LST1-219ENST00000464044 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
LST1-219ENST00000464044 RNMTO43148 476 aaKnown RBP18.25■□□□□ 0.51
LST1-219ENST00000464044 SIK1P57059 783 aa18.25■□□□□ 0.51
LST1-219ENST00000464044 TEFQ10587 303 aa18.25■□□□□ 0.51
LST1-219ENST00000464044 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
LST1-219ENST00000464044 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
LST1-219ENST00000464044 NUP188Q5SRE5 1749 aa18.25■□□□□ 0.51
LST1-219ENST00000464044 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
LST1-219ENST00000464044 AK7Q96M32 723 aa18.24■□□□□ 0.51
LST1-219ENST00000464044 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
LST1-219ENST00000464044 SLC52A2Q9HAB3 445 aa18.24■□□□□ 0.51
LST1-219ENST00000464044 ANO8Q9HCE9 1232 aaPredicted RBP18.24■□□□□ 0.51
LST1-219ENST00000464044 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
LST1-219ENST00000464044 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
LST1-219ENST00000464044 ANP32CO43423 234 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms