RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
XRN1-203ENST00000463916 PROM2Q8N271 834 aa17.75■□□□□ 0.43
XRN1-203ENST00000463916 EYA1Q99502 592 aa17.75■□□□□ 0.43
XRN1-203ENST00000463916 RREB1Q92766 1687 aa17.75■□□□□ 0.43
XRN1-203ENST00000463916 EIF4A2Q14240 407 aaKnown RBP17.75■□□□□ 0.43
XRN1-203ENST00000463916 RAPGEF4Q8WZA2 1011 aa17.75■□□□□ 0.43
XRN1-203ENST00000463916 R3HDM1Q15032 1099 aaKnown RBP17.74■□□□□ 0.43
XRN1-203ENST00000463916 NCAPD2Q15021 1401 aa17.73■□□□□ 0.43
XRN1-203ENST00000463916 NHSQ6T4R5 1651 aa17.73■□□□□ 0.43
XRN1-203ENST00000463916 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
XRN1-203ENST00000463916 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
XRN1-203ENST00000463916 CC2D1BQ5T0F9 858 aaKnown RBP17.72■□□□□ 0.43
XRN1-203ENST00000463916 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
XRN1-203ENST00000463916 RGPD3A6NKT7 1758 aaPredicted RBP17.7■□□□□ 0.42
XRN1-203ENST00000463916 RGPD4Q7Z3J3 1758 aa17.7■□□□□ 0.42
XRN1-203ENST00000463916 CNGB1Q14028 1251 aaPredicted RBP17.7■□□□□ 0.42
XRN1-203ENST00000463916 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
XRN1-203ENST00000463916 CYP27B1O15528 508 aa17.68■□□□□ 0.42
XRN1-203ENST00000463916 TXNRD1Q16881 649 aa17.68■□□□□ 0.42
XRN1-203ENST00000463916 BTAF1O14981 1849 aa17.68■□□□□ 0.42
XRN1-203ENST00000463916 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
XRN1-203ENST00000463916 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
XRN1-203ENST00000463916 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
XRN1-203ENST00000463916 MTHFSP49914 203 aa17.67■□□□□ 0.42
XRN1-203ENST00000463916 DOT1LQ8TEK3 1739 aa17.66■□□□□ 0.42
XRN1-203ENST00000463916 PCDH11XQ9BZA7 1347 aa17.66■□□□□ 0.42
XRN1-203ENST00000463916 PCDH11YQ9BZA8 1340 aa17.66■□□□□ 0.42
XRN1-203ENST00000463916 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
XRN1-203ENST00000463916 PKD1L3Q7Z443 1732 aa17.65■□□□□ 0.42
XRN1-203ENST00000463916 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
XRN1-203ENST00000463916 IL13P35225 146 aa17.64■□□□□ 0.41
XRN1-203ENST00000463916 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
XRN1-203ENST00000463916 LRRC4BQ9NT99 713 aa17.63■□□□□ 0.41
XRN1-203ENST00000463916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.419e-8■■■□□ 17.2
XRN1-203ENST00000463916 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
XRN1-203ENST00000463916 KCNQ4P56696 695 aa17.61■□□□□ 0.41
XRN1-203ENST00000463916 PDGFDQ9GZP0 370 aaPredicted RBP17.61■□□□□ 0.41
XRN1-203ENST00000463916 NKX1-1Q15270 411 aaPredicted RBP17.6■□□□□ 0.41
XRN1-203ENST00000463916 TOGARAM1Q9Y4F4 1720 aa17.6■□□□□ 0.41
XRN1-203ENST00000463916 SULT6B1Q6IMI4 303 aa17.6■□□□□ 0.41
XRN1-203ENST00000463916 PHKG2P15735 406 aa17.59■□□□□ 0.41
XRN1-203ENST00000463916 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
XRN1-203ENST00000463916 SLC15A2Q16348 729 aa17.58■□□□□ 0.4
XRN1-203ENST00000463916 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
XRN1-203ENST00000463916 KDRP35968 1356 aa17.57■□□□□ 0.4
XRN1-203ENST00000463916 LRP5O75197 1615 aa17.57■□□□□ 0.4
XRN1-203ENST00000463916 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
XRN1-203ENST00000463916 ZNF827Q17R98 1081 aa17.56■□□□□ 0.4
XRN1-203ENST00000463916 STK32BQ9NY57 414 aa17.56■□□□□ 0.4
XRN1-203ENST00000463916 ITGB4P16144 1822 aa17.56■□□□□ 0.4
XRN1-203ENST00000463916 PIGBQ92521 554 aa17.56■□□□□ 0.4
XRN1-203ENST00000463916 LY75O60449 1722 aa17.55■□□□□ 0.4
XRN1-203ENST00000463916 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
XRN1-203ENST00000463916 HMOX1P09601 288 aa17.55■□□□□ 0.4
XRN1-203ENST00000463916 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
XRN1-203ENST00000463916 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
XRN1-203ENST00000463916 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
XRN1-203ENST00000463916 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
XRN1-203ENST00000463916 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
XRN1-203ENST00000463916 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
XRN1-203ENST00000463916 AMOTQ4VCS5 1084 aa17.52■□□□□ 0.4
XRN1-203ENST00000463916 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
XRN1-203ENST00000463916 CCNL1Q9UK58 526 aaPredicted RBP17.52■□□□□ 0.4
XRN1-203ENST00000463916 PPP2R1AP30153 589 aa17.52■□□□□ 0.39
XRN1-203ENST00000463916 PALLDQ8WX93 1383 aa17.51■□□□□ 0.39
XRN1-203ENST00000463916 ZBTB7AO95365 584 aa17.51■□□□□ 0.39
XRN1-203ENST00000463916 KDM6AO15550 1401 aaPredicted RBP17.5■□□□□ 0.39
XRN1-203ENST00000463916 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
XRN1-203ENST00000463916 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
XRN1-203ENST00000463916 DCAF5Q96JK2 942 aa17.49■□□□□ 0.39
XRN1-203ENST00000463916 SPON1Q9HCB6 807 aa17.49■□□□□ 0.39
XRN1-203ENST00000463916 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
XRN1-203ENST00000463916 ERVV-2B6SEH9 535 aa17.48■□□□□ 0.39
XRN1-203ENST00000463916 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
XRN1-203ENST00000463916 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
XRN1-203ENST00000463916 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
XRN1-203ENST00000463916 ATF5Q9Y2D1 282 aaPredicted RBP17.48■□□□□ 0.39
XRN1-203ENST00000463916 C1orf141Q5JVX7 400 aa17.47■□□□□ 0.39
XRN1-203ENST00000463916 SMARCC1Q92922 1105 aaPredicted RBP17.47■□□□□ 0.39
XRN1-203ENST00000463916 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
XRN1-203ENST00000463916 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
XRN1-203ENST00000463916 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.39
XRN1-203ENST00000463916 PTGER2P43116 358 aa17.46■□□□□ 0.39
XRN1-203ENST00000463916 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
XRN1-203ENST00000463916 LOC102724428A0A0B4J2F2 783 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 SIK1P57059 783 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 NFATC2IPQ8NCF5 419 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 CABP4P57796 275 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 C5P01031 1676 aa17.44■□□□□ 0.38
XRN1-203ENST00000463916 MTFR1LQ9H019 292 aa17.43■□□□□ 0.38
XRN1-203ENST00000463916 ITPK1Q13572 414 aa17.43■□□□□ 0.38
XRN1-203ENST00000463916 AMIGO3Q86WK7 504 aa17.43■□□□□ 0.38
XRN1-203ENST00000463916 SLC4A9Q96Q91 983 aa17.43■□□□□ 0.38
XRN1-203ENST00000463916 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
XRN1-203ENST00000463916 SMIM5Q71RC9 77 aa17.41■□□□□ 0.38
XRN1-203ENST00000463916 LINC00116Q8NCU8 138 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms