RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 EXOSC9Q06265 439 aaKnown RBP24.63■■□□□ 1.53
CCDC78-206ENST00000463539 COL16A1Q07092 1604 aaPredicted RBP24.62■■□□□ 1.53
CCDC78-206ENST00000463539 COL22A1Q8NFW1 1626 aaPredicted RBP24.62■■□□□ 1.53
CCDC78-206ENST00000463539 PHLPP1O60346 1717 aa24.62■■□□□ 1.53
CCDC78-206ENST00000463539 FAM208AQ9UK61 1670 aaKnown RBP24.62■■□□□ 1.53
CCDC78-206ENST00000463539 AMOTQ4VCS5 1084 aa24.61■■□□□ 1.53
CCDC78-206ENST00000463539 PLEKHO1Q53GL0 409 aaPredicted RBP24.61■■□□□ 1.53
CCDC78-206ENST00000463539 MBIPQ9NS73 344 aa24.6■■□□□ 1.53
CCDC78-206ENST00000463539 COL5A2P05997 1499 aaPredicted RBP24.6■■□□□ 1.53
CCDC78-206ENST00000463539 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.59■■□□□ 1.53
CCDC78-206ENST00000463539 RAPGEF4Q8WZA2 1011 aa24.59■■□□□ 1.53
CCDC78-206ENST00000463539 WDR17Q8IZU2 1322 aa24.59■■□□□ 1.53
CCDC78-206ENST00000463539 PLIN1O60240 522 aa24.58■■□□□ 1.53
CCDC78-206ENST00000463539 CRB1P82279 1406 aa24.58■■□□□ 1.53
CCDC78-206ENST00000463539 RARSP54136 660 aaKnown RBP24.58■■□□□ 1.53
CCDC78-206ENST00000463539 BCAR3O75815 825 aa24.57■■□□□ 1.52
CCDC78-206ENST00000463539 CERKQ8TCT0 537 aa24.57■■□□□ 1.52
CCDC78-206ENST00000463539 ZNF530Q6P9A1 599 aaPredicted RBP24.56■■□□□ 1.52
CCDC78-206ENST00000463539 TATP17735 454 aaPredicted RBP24.55■■□□□ 1.52
CCDC78-206ENST00000463539 TOM1L2Q6ZVM7 507 aa24.55■■□□□ 1.52
CCDC78-206ENST00000463539 PLEKHG2Q9H7P9 1386 aa24.55■■□□□ 1.52
CCDC78-206ENST00000463539 CHL1O00533 1208 aa24.54■■□□□ 1.52
CCDC78-206ENST00000463539 AKAP4Q5JQC9 854 aa24.54■■□□□ 1.52
CCDC78-206ENST00000463539 MEGF6O75095 1541 aa24.53■■□□□ 1.52
CCDC78-206ENST00000463539 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
CCDC78-206ENST00000463539 EVA1CP58658 441 aa24.53■■□□□ 1.52
CCDC78-206ENST00000463539 C1orf141Q5JVX7 400 aa24.53■■□□□ 1.52
CCDC78-206ENST00000463539 IL17REQ8NFR9 667 aa24.52■■□□□ 1.52
CCDC78-206ENST00000463539 STRN4Q9NRL3 753 aa24.52■■□□□ 1.52
CCDC78-206ENST00000463539 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
CCDC78-206ENST00000463539 BCL2L13Q9BXK5 485 aa24.5■■□□□ 1.51
CCDC78-206ENST00000463539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC78-206ENST00000463539 CEMIPQ8WUJ3 1361 aa24.5■■□□□ 1.51
CCDC78-206ENST00000463539 COL14A1Q05707 1796 aaKnown RBP24.5■■□□□ 1.51
CCDC78-206ENST00000463539 CANXP27824 592 aaKnown RBP24.49■■□□□ 1.51
CCDC78-206ENST00000463539 LARP1Q6PKG0 1096 aaKnown RBP24.49■■□□□ 1.51
CCDC78-206ENST00000463539 ZNF428Q96B54 188 aa24.49■■□□□ 1.51
CCDC78-206ENST00000463539 CARD10Q9BWT7 1032 aa24.49■■□□□ 1.51
CCDC78-206ENST00000463539 TSPYL4Q9UJ04 414 aa24.49■■□□□ 1.51
CCDC78-206ENST00000463539 SPG7Q9UQ90 795 aa24.49■■□□□ 1.51
CCDC78-206ENST00000463539 PPP4R2Q9NY27 417 aa24.49■■□□□ 1.51
CCDC78-206ENST00000463539 SMC4Q9NTJ3 1288 aa24.48■■□□□ 1.51
CCDC78-206ENST00000463539 TWISTNBQ3B726 338 aaPredicted RBP24.47■■□□□ 1.51
CCDC78-206ENST00000463539 C20orf194Q5TEA3 1177 aa24.47■■□□□ 1.51
CCDC78-206ENST00000463539 TSPYL6Q8N831 410 aa24.47■■□□□ 1.51
CCDC78-206ENST00000463539 C8orf58Q8NAV2 365 aa24.47■■□□□ 1.51
CCDC78-206ENST00000463539 SSH1Q8WYL5 1049 aa24.47■■□□□ 1.51
CCDC78-206ENST00000463539 FRAT1Q92837 279 aaPredicted RBP24.47■■□□□ 1.51
CCDC78-206ENST00000463539 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
CCDC78-206ENST00000463539 OVOS2A0A0G2JMS6 1433 aa24.46■■□□□ 1.51
CCDC78-206ENST00000463539 ADAMTS2O95450 1211 aa24.46■■□□□ 1.51
CCDC78-206ENST00000463539 MPRIPQ6WCQ1 1025 aa24.46■■□□□ 1.51
CCDC78-206ENST00000463539 VAMP4O75379 141 aa24.45■■□□□ 1.5
CCDC78-206ENST00000463539 TAF7Q15545 349 aaPredicted RBP24.45■■□□□ 1.5
CCDC78-206ENST00000463539 ALDH1L2Q3SY69 923 aa24.45■■□□□ 1.5
CCDC78-206ENST00000463539 LGR6Q9HBX8 967 aa24.45■■□□□ 1.5
CCDC78-206ENST00000463539 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.5
CCDC78-206ENST00000463539 ELL2O00472 640 aaPredicted RBP24.45■■□□□ 1.5
CCDC78-206ENST00000463539 EXOC6Q8TAG9 804 aa24.45■■□□□ 1.5
CCDC78-206ENST00000463539 NUTM2BA6NNL0 878 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-206ENST00000463539 NUTM2EB1AL46 878 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-206ENST00000463539 NUTM2AQ8IVF1 878 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-206ENST00000463539 CRBNQ96SW2 442 aa24.43■■□□□ 1.5
CCDC78-206ENST00000463539 JCADQ9P266 1359 aa24.43■■□□□ 1.5
CCDC78-206ENST00000463539 RNMTO43148 476 aaKnown RBP24.42■■□□□ 1.5
CCDC78-206ENST00000463539 TEFQ10587 303 aa24.42■■□□□ 1.5
CCDC78-206ENST00000463539 IL2RBP14784 551 aa24.42■■□□□ 1.5
CCDC78-206ENST00000463539 PHKG2P15735 406 aa24.42■■□□□ 1.5
CCDC78-206ENST00000463539 PDE3AQ14432 1141 aa24.42■■□□□ 1.5
CCDC78-206ENST00000463539 IFNL2Q8IZJ0 200 aa24.42■■□□□ 1.5
CCDC78-206ENST00000463539 PKD1L3Q7Z443 1732 aa24.4■■□□□ 1.5
CCDC78-206ENST00000463539 PARP4Q9UKK3 1724 aaKnown RBP24.4■■□□□ 1.5
CCDC78-206ENST00000463539 KIF16BQ96L93 1317 aa24.4■■□□□ 1.5
CCDC78-206ENST00000463539 KRT24Q2M2I5 525 aa24.4■■□□□ 1.5
CCDC78-206ENST00000463539 ZKSCAN2Q63HK3 967 aa24.39■■□□□ 1.49
CCDC78-206ENST00000463539 USP35Q9P2H5 1018 aa24.39■■□□□ 1.49
CCDC78-206ENST00000463539 PCDH11XQ9BZA7 1347 aa24.38■■□□□ 1.49
CCDC78-206ENST00000463539 PCDH11YQ9BZA8 1340 aa24.38■■□□□ 1.49
CCDC78-206ENST00000463539 CYP27B1O15528 508 aa24.38■■□□□ 1.49
CCDC78-206ENST00000463539 ZCRB1Q8TBF4 217 aaKnown RBP24.38■■□□□ 1.49
CCDC78-206ENST00000463539 BRPF1P55201 1214 aaPredicted RBP24.37■■□□□ 1.49
CCDC78-206ENST00000463539 PLCH1Q4KWH8 1693 aa24.36■■□□□ 1.49
CCDC78-206ENST00000463539 ADAMTS7Q9UKP4 1686 aa24.36■■□□□ 1.49
CCDC78-206ENST00000463539 HSP90AB1P08238 724 aaKnown RBP24.36■■□□□ 1.49
CCDC78-206ENST00000463539 KDM6AO15550 1401 aaPredicted RBP24.36■■□□□ 1.49
CCDC78-206ENST00000463539 B4GALNT3Q6L9W6 998 aa24.35■■□□□ 1.49
CCDC78-206ENST00000463539 DCAF5Q96JK2 942 aa24.35■■□□□ 1.49
CCDC78-206ENST00000463539 NOB1Q9ULX3 412 aaKnown RBP24.35■■□□□ 1.49
CCDC78-206ENST00000463539 BTBD11A6QL63 1104 aa24.35■■□□□ 1.49
CCDC78-206ENST00000463539 IPO8O15397 1037 aaKnown RBP24.35■■□□□ 1.49
CCDC78-206ENST00000463539 MRPL50Q8N5N7 158 aaKnown RBP24.35■■□□□ 1.49
CCDC78-206ENST00000463539 PANK1Q8TE04 598 aa24.35■■□□□ 1.49
CCDC78-206ENST00000463539 MS4A1P11836 297 aa24.34■■□□□ 1.49
CCDC78-206ENST00000463539 CCDC136Q96JN2 1154 aa24.33■■□□□ 1.49
CCDC78-206ENST00000463539 TCERG1O14776 1098 aaKnown RBP24.33■■□□□ 1.48
CCDC78-206ENST00000463539 ATF7IPQ6VMQ6 1270 aa24.33■■□□□ 1.48
CCDC78-206ENST00000463539 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.48
CCDC78-206ENST00000463539 SOS1Q07889 1333 aaPredicted RBP24.32■■□□□ 1.48
CCDC78-206ENST00000463539 SPATA31A6Q5VVP1 1343 aa24.32■■□□□ 1.48
CCDC78-206ENST00000463539 TRIM27P14373 513 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms