RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
SSR3-202ENST00000463503 ITGB4P16144 1822 aa15.95■□□□□ 0.14
SSR3-202ENST00000463503 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
SSR3-202ENST00000463503 ANKRD36BQ8N2N9 1353 aa15.94■□□□□ 0.14
SSR3-202ENST00000463503 KIF13BQ9NQT8 1826 aa15.94■□□□□ 0.14
SSR3-202ENST00000463503 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
SSR3-202ENST00000463503 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
SSR3-202ENST00000463503 WDR90Q96KV7 1748 aa15.93■□□□□ 0.14
SSR3-202ENST00000463503 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
SSR3-202ENST00000463503 MEGF6O75095 1541 aa15.91■□□□□ 0.14
SSR3-202ENST00000463503 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
SSR3-202ENST00000463503 BRCA1P38398 1863 aaKnown RBP15.91■□□□□ 0.14
SSR3-202ENST00000463503 GPBP1L1Q9HC44 474 aaPredicted RBP15.9■□□□□ 0.14
SSR3-202ENST00000463503 MAP2P11137 1827 aaKnown RBP15.89■□□□□ 0.13
SSR3-202ENST00000463503 COL23A1Q86Y22 540 aaPredicted RBP15.89■□□□□ 0.13
SSR3-202ENST00000463503 NME9Q86XW9 330 aa15.88■□□□□ 0.13
SSR3-202ENST00000463503 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
SSR3-202ENST00000463503 CCER1Q8TC90 406 aaPredicted RBP15.87■□□□□ 0.13
SSR3-202ENST00000463503 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
SSR3-202ENST00000463503 EDC4Q6P2E9 1401 aaKnown RBP15.86■□□□□ 0.13
SSR3-202ENST00000463503 PRIM1P49642 420 aaKnown RBP15.86■□□□□ 0.13
SSR3-202ENST00000463503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■□□□□ 9
SSR3-202ENST00000463503 DDX54Q8TDD1 881 aaKnown RBP15.86■□□□□ 0.13
SSR3-202ENST00000463503 ZNF526Q8TF50 670 aaPredicted RBP15.86■□□□□ 0.13
SSR3-202ENST00000463503 PKD1L3Q7Z443 1732 aa15.85■□□□□ 0.13
SSR3-202ENST00000463503 SYTL4Q96C24 671 aaPredicted RBP15.85■□□□□ 0.13
SSR3-202ENST00000463503 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
SSR3-202ENST00000463503 CD2APQ9Y5K6 639 aa15.85■□□□□ 0.13
SSR3-202ENST00000463503 KIF3CO14782 793 aa15.84■□□□□ 0.13
SSR3-202ENST00000463503 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
SSR3-202ENST00000463503 A0A1W2PP64 1363 aa15.82■□□□□ 0.12
SSR3-202ENST00000463503 ROCK2O75116 1388 aaKnown RBP15.82■□□□□ 0.12
SSR3-202ENST00000463503 USP47Q96K76 1375 aa15.82■□□□□ 0.12
SSR3-202ENST00000463503 ARFGEF1Q9Y6D6 1849 aa15.82■□□□□ 0.12
SSR3-202ENST00000463503 MSH5O43196 834 aa15.81■□□□□ 0.12
SSR3-202ENST00000463503 IP6K1Q92551 441 aa15.81■□□□□ 0.12
SSR3-202ENST00000463503 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
SSR3-202ENST00000463503 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
SSR3-202ENST00000463503 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
SSR3-202ENST00000463503 DNAJC5GQ8N7S2 189 aa15.79■□□□□ 0.12
SSR3-202ENST00000463503 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
SSR3-202ENST00000463503 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
SSR3-202ENST00000463503 APLP1P51693 650 aa15.77■□□□□ 0.12
SSR3-202ENST00000463503 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
SSR3-202ENST00000463503 PALLDQ8WX93 1383 aa15.76■□□□□ 0.11
SSR3-202ENST00000463503 MAP3K19Q56UN5 1328 aa15.76■□□□□ 0.11
SSR3-202ENST00000463503 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
SSR3-202ENST00000463503 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
SSR3-202ENST00000463503 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
SSR3-202ENST00000463503 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
SSR3-202ENST00000463503 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
SSR3-202ENST00000463503 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 ANKRD26Q9UPS8 1709 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 HOXC9P31274 260 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 NEUROD1Q13562 356 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 WWC3Q9ULE0 1092 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 SBF1O95248 1867 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
SSR3-202ENST00000463503 FLAD1Q8NFF5 587 aa15.74■□□□□ 0.11
SSR3-202ENST00000463503 SLC12A5Q9H2X9 1139 aa15.74■□□□□ 0.11
SSR3-202ENST00000463503 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
SSR3-202ENST00000463503 NSD3Q9BZ95 1437 aa15.72■□□□□ 0.11
SSR3-202ENST00000463503 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
SSR3-202ENST00000463503 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
SSR3-202ENST00000463503 TOMM70O94826 608 aa15.7■□□□□ 0.1
SSR3-202ENST00000463503 FBLN1P23142 703 aa15.7■□□□□ 0.1
SSR3-202ENST00000463503 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
SSR3-202ENST00000463503 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
SSR3-202ENST00000463503 C10orf71Q711Q0 1435 aa15.69■□□□□ 0.1
SSR3-202ENST00000463503 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
SSR3-202ENST00000463503 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
SSR3-202ENST00000463503 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
SSR3-202ENST00000463503 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
SSR3-202ENST00000463503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.68■□□□□ 0.1
SSR3-202ENST00000463503 COL13A1Q5TAT6 717 aaPredicted RBP15.68■□□□□ 0.1
SSR3-202ENST00000463503 USHBP1Q8N6Y0 703 aa15.68■□□□□ 0.1
SSR3-202ENST00000463503 TERF2IPQ9NYB0 399 aa15.68■□□□□ 0.1
SSR3-202ENST00000463503 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
SSR3-202ENST00000463503 MYH14Q7Z406 1995 aaKnown RBP15.67■□□□□ 0.1
SSR3-202ENST00000463503 PHF14O94880 888 aa15.67■□□□□ 0.1
SSR3-202ENST00000463503 AK7Q96M32 723 aa15.67■□□□□ 0.1
SSR3-202ENST00000463503 NMRK2Q9NPI5 230 aa15.67■□□□□ 0.1
SSR3-202ENST00000463503 SSFA2P28290 1259 aa15.66■□□□□ 0.1
SSR3-202ENST00000463503 AMPHP49418 695 aa15.66■□□□□ 0.1
SSR3-202ENST00000463503 JMYQ8N9B5 988 aa15.66■□□□□ 0.1
SSR3-202ENST00000463503 SMG6Q86US8 1419 aaKnown RBP15.66■□□□□ 0.1
SSR3-202ENST00000463503 CYP27B1O15528 508 aa15.65■□□□□ 0.1
SSR3-202ENST00000463503 MPRIPQ6WCQ1 1025 aa15.65■□□□□ 0.1
SSR3-202ENST00000463503 TIAM2Q8IVF5 1701 aa15.65■□□□□ 0.1
SSR3-202ENST00000463503 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
SSR3-202ENST00000463503 HTRA3P83110 453 aa15.64■□□□□ 0.09
SSR3-202ENST00000463503 CCDC88AQ3V6T2 1871 aa15.64■□□□□ 0.09
SSR3-202ENST00000463503 LINC00116Q8NCU8 138 aa15.64■□□□□ 0.09
SSR3-202ENST00000463503 KLRG1Q96E93 195 aa15.64■□□□□ 0.09
SSR3-202ENST00000463503 COG3Q96JB2 828 aa15.64■□□□□ 0.09
SSR3-202ENST00000463503 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.09
SSR3-202ENST00000463503 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
SSR3-202ENST00000463503 HMGB2P26583 209 aaKnown RBP15.63■□□□□ 0.09
SSR3-202ENST00000463503 RRS1Q15050 365 aaKnown RBP15.63■□□□□ 0.09
SSR3-202ENST00000463503 RAPGEF4Q8WZA2 1011 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms