RNA–Protein interactions for RNA: ENST00000463143.5

DUBR-201, DPPA2 upstream binding RNA, humanhuman

TSL 3

Gene DUBR, Length 801 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-201ENST00000463143 COL22A1Q8NFW1 1626 aaPredicted RBP11.95□□□□□ -0.5
DUBR-201ENST00000463143 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
DUBR-201ENST00000463143 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
DUBR-201ENST00000463143 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
DUBR-201ENST00000463143 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
DUBR-201ENST00000463143 COL5A2P05997 1499 aaPredicted RBP11.94□□□□□ -0.5
DUBR-201ENST00000463143 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
DUBR-201ENST00000463143 IL16Q14005 1332 aa11.93□□□□□ -0.5
DUBR-201ENST00000463143 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
DUBR-201ENST00000463143 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
DUBR-201ENST00000463143 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
DUBR-201ENST00000463143 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
DUBR-201ENST00000463143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
DUBR-201ENST00000463143 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
DUBR-201ENST00000463143 RGPD1P0DJD0 1748 aa11.93□□□□□ -0.5
DUBR-201ENST00000463143 COL18A1P39060 1754 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 ZBTB22O15209 634 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 IL2RBP14784 551 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 MCM10Q7L590 875 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
DUBR-201ENST00000463143 THUMPD2Q9BTF0 503 aaKnown RBP11.92□□□□□ -0.5
DUBR-201ENST00000463143 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
DUBR-201ENST00000463143 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
DUBR-201ENST00000463143 GNAI1P63096 354 aa11.91□□□□□ -0.5
DUBR-201ENST00000463143 CRB1P82279 1406 aa11.91□□□□□ -0.5
DUBR-201ENST00000463143 NCAPD2Q15021 1401 aa11.91□□□□□ -0.5
DUBR-201ENST00000463143 UNC5CLQ8IV45 518 aa11.9□□□□□ -0.5
DUBR-201ENST00000463143 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
DUBR-201ENST00000463143 IFT57Q9NWB7 429 aa11.9□□□□□ -0.5
DUBR-201ENST00000463143 MAP3K5Q99683 1374 aa11.9□□□□□ -0.5
DUBR-201ENST00000463143 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.51
DUBR-201ENST00000463143 ABCA3Q99758 1704 aa11.89□□□□□ -0.51
DUBR-201ENST00000463143 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
DUBR-201ENST00000463143 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
DUBR-201ENST00000463143 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
DUBR-201ENST00000463143 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
DUBR-201ENST00000463143 USP21Q9UK80 565 aa11.89□□□□□ -0.51
DUBR-201ENST00000463143 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
DUBR-201ENST00000463143 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
DUBR-201ENST00000463143 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
DUBR-201ENST00000463143 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
DUBR-201ENST00000463143 LGR6Q9HBX8 967 aa11.88□□□□□ -0.51
DUBR-201ENST00000463143 THRAP3Q9Y2W1 955 aaKnown RBP11.88□□□□□ -0.51
DUBR-201ENST00000463143 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
DUBR-201ENST00000463143 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
DUBR-201ENST00000463143 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
DUBR-201ENST00000463143 PHKG2P15735 406 aa11.87□□□□□ -0.51
DUBR-201ENST00000463143 TAF7Q15545 349 aaPredicted RBP11.87□□□□□ -0.51
DUBR-201ENST00000463143 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
DUBR-201ENST00000463143 FBXO41Q8TF61 875 aa11.87□□□□□ -0.51
DUBR-201ENST00000463143 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
DUBR-201ENST00000463143 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
DUBR-201ENST00000463143 SPATA31A1Q5TZJ5 1347 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 EXOC5O00471 708 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 CHL1O00533 1208 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 RNMTO43148 476 aaKnown RBP11.86□□□□□ -0.51
DUBR-201ENST00000463143 EXOSC9Q06265 439 aaKnown RBP11.86□□□□□ -0.51
DUBR-201ENST00000463143 TEFQ10587 303 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 VPS72Q15906 364 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 MEGF6O75095 1541 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 SLIT2O94813 1529 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
DUBR-201ENST00000463143 CYP27B1O15528 508 aa11.85□□□□□ -0.51
DUBR-201ENST00000463143 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
DUBR-201ENST00000463143 MBIPQ9NS73 344 aa11.85□□□□□ -0.51
DUBR-201ENST00000463143 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
DUBR-201ENST00000463143 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
DUBR-201ENST00000463143 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
DUBR-201ENST00000463143 BABAM1Q9NWV8 329 aa11.84□□□□□ -0.51
DUBR-201ENST00000463143 LRP6O75581 1613 aa11.84□□□□□ -0.51
DUBR-201ENST00000463143 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
DUBR-201ENST00000463143 AFF2P51816 1311 aa11.84□□□□□ -0.51
DUBR-201ENST00000463143 BCL9LQ86UU0 1499 aa11.83□□□□□ -0.52
DUBR-201ENST00000463143 RGPD2P0DJD1 1756 aa11.83□□□□□ -0.52
DUBR-201ENST00000463143 NEFLP07196 543 aa11.83□□□□□ -0.52
DUBR-201ENST00000463143 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.52
DUBR-201ENST00000463143 BTBD11A6QL63 1104 aa11.82□□□□□ -0.52
DUBR-201ENST00000463143 CABP4P57796 275 aa11.82□□□□□ -0.52
DUBR-201ENST00000463143 DDB1Q16531 1140 aa11.82□□□□□ -0.52
DUBR-201ENST00000463143 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
DUBR-201ENST00000463143 CEMIPQ8WUJ3 1361 aa11.81□□□□□ -0.52
DUBR-201ENST00000463143 A0A0G2JS52 829 aa11.81□□□□□ -0.52
DUBR-201ENST00000463143 ELL2O00472 640 aaPredicted RBP11.81□□□□□ -0.52
DUBR-201ENST00000463143 MYT1Q01538 1121 aa11.81□□□□□ -0.52
DUBR-201ENST00000463143 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
DUBR-201ENST00000463143 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
DUBR-201ENST00000463143 NFATC2IPQ8NCF5 419 aa11.81□□□□□ -0.52
DUBR-201ENST00000463143 QTRT2Q9H974 415 aaKnown RBP11.81□□□□□ -0.52
DUBR-201ENST00000463143 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
DUBR-201ENST00000463143 ERVV-2B6SEH9 535 aa11.8□□□□□ -0.52
DUBR-201ENST00000463143 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms