RNA–Protein interactions for RNA: ENST00000463093.5

SSBP1-203, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-203ENST00000463093 MEGF6O75095 1541 aa18.32■□□□□ 0.52
SSBP1-203ENST00000463093 BCL9O00512 1426 aa18.32■□□□□ 0.52
SSBP1-203ENST00000463093 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
SSBP1-203ENST00000463093 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
SSBP1-203ENST00000463093 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
SSBP1-203ENST00000463093 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
SSBP1-203ENST00000463093 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
SSBP1-203ENST00000463093 NUDCQ9Y266 331 aa18.29■□□□□ 0.52
SSBP1-203ENST00000463093 KAT6BQ8WYB5 2073 aa18.28■□□□□ 0.52
SSBP1-203ENST00000463093 CYP27B1O15528 508 aa18.28■□□□□ 0.52
SSBP1-203ENST00000463093 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-203ENST00000463093 DEFB132Q7Z7B7 95 aa18.28■□□□□ 0.52
SSBP1-203ENST00000463093 PRKRIP1Q9H875 184 aaPredicted RBP18.28■□□□□ 0.52
SSBP1-203ENST00000463093 LRRC37A3O60309 1634 aa18.27■□□□□ 0.52
SSBP1-203ENST00000463093 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
SSBP1-203ENST00000463093 APBA3O96018 575 aa18.27■□□□□ 0.52
SSBP1-203ENST00000463093 HMOX1P09601 288 aa18.27■□□□□ 0.52
SSBP1-203ENST00000463093 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
SSBP1-203ENST00000463093 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
SSBP1-203ENST00000463093 KDRP35968 1356 aa18.27■□□□□ 0.51
SSBP1-203ENST00000463093 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
SSBP1-203ENST00000463093 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
SSBP1-203ENST00000463093 KCNQ2O43526 872 aa18.26■□□□□ 0.51
SSBP1-203ENST00000463093 BAG6P46379 1132 aa18.26■□□□□ 0.51
SSBP1-203ENST00000463093 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
SSBP1-203ENST00000463093 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
SSBP1-203ENST00000463093 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
SSBP1-203ENST00000463093 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
SSBP1-203ENST00000463093 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-203ENST00000463093 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
SSBP1-203ENST00000463093 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
SSBP1-203ENST00000463093 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
SSBP1-203ENST00000463093 IFNL2Q8IZJ0 200 aa18.24■□□□□ 0.51
SSBP1-203ENST00000463093 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-203ENST00000463093 PHKG2P15735 406 aa18.23■□□□□ 0.51
SSBP1-203ENST00000463093 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSBP1-203ENST00000463093 CAMKK2Q96RR4 588 aa18.23■□□□□ 0.51
SSBP1-203ENST00000463093 PLSCR1O15162 318 aa18.22■□□□□ 0.51
SSBP1-203ENST00000463093 FCHSD2O94868 740 aa18.21■□□□□ 0.51
SSBP1-203ENST00000463093 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-203ENST00000463093 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
SSBP1-203ENST00000463093 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
SSBP1-203ENST00000463093 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
SSBP1-203ENST00000463093 RGPD1P0DJD0 1748 aa18.18■□□□□ 0.5
SSBP1-203ENST00000463093 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
SSBP1-203ENST00000463093 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
SSBP1-203ENST00000463093 EP400Q96L91 3159 aa18.18■□□□□ 0.5
SSBP1-203ENST00000463093 PRKAR2BP31323 418 aa18.17■□□□□ 0.5
SSBP1-203ENST00000463093 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
SSBP1-203ENST00000463093 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
SSBP1-203ENST00000463093 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
SSBP1-203ENST00000463093 ANP32CO43423 234 aa18.16■□□□□ 0.5
SSBP1-203ENST00000463093 AKAP4Q5JQC9 854 aa18.16■□□□□ 0.5
SSBP1-203ENST00000463093 PROM2Q8N271 834 aa18.16■□□□□ 0.5
SSBP1-203ENST00000463093 SBF2Q86WG5 1849 aa18.15■□□□□ 0.5
SSBP1-203ENST00000463093 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
SSBP1-203ENST00000463093 MPRIPQ6WCQ1 1025 aa18.15■□□□□ 0.5
SSBP1-203ENST00000463093 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
SSBP1-203ENST00000463093 PIGBQ92521 554 aa18.14■□□□□ 0.49
SSBP1-203ENST00000463093 PKD1L3Q7Z443 1732 aa18.13■□□□□ 0.49
SSBP1-203ENST00000463093 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
SSBP1-203ENST00000463093 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
SSBP1-203ENST00000463093 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
SSBP1-203ENST00000463093 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
SSBP1-203ENST00000463093 PLEKHF1Q96S99 279 aa18.11■□□□□ 0.49
SSBP1-203ENST00000463093 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
SSBP1-203ENST00000463093 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
SSBP1-203ENST00000463093 RNMTO43148 476 aaKnown RBP18.1■□□□□ 0.49
SSBP1-203ENST00000463093 CABP4P57796 275 aa18.1■□□□□ 0.49
SSBP1-203ENST00000463093 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
SSBP1-203ENST00000463093 GNAT3A8MTJ3 354 aa18.09■□□□□ 0.49
SSBP1-203ENST00000463093 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
SSBP1-203ENST00000463093 NEFMP07197 916 aa18.08■□□□□ 0.48
SSBP1-203ENST00000463093 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
SSBP1-203ENST00000463093 SLC27A3Q5K4L6 730 aa18.08■□□□□ 0.48
SSBP1-203ENST00000463093 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
SSBP1-203ENST00000463093 IL17REQ8NFR9 667 aa18.08■□□□□ 0.48
SSBP1-203ENST00000463093 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
SSBP1-203ENST00000463093 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-203ENST00000463093 NHSQ6T4R5 1651 aa18.07■□□□□ 0.48
SSBP1-203ENST00000463093 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
SSBP1-203ENST00000463093 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
SSBP1-203ENST00000463093 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
SSBP1-203ENST00000463093 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
SSBP1-203ENST00000463093 LRRC4BQ9NT99 713 aa18.06■□□□□ 0.48
SSBP1-203ENST00000463093 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
SSBP1-203ENST00000463093 SLC52A2Q9HAB3 445 aa18.05■□□□□ 0.48
SSBP1-203ENST00000463093 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
SSBP1-203ENST00000463093 BTAF1O14981 1849 aa18.03■□□□□ 0.48
SSBP1-203ENST00000463093 KCNQ4P56696 695 aa18.03■□□□□ 0.48
SSBP1-203ENST00000463093 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
SSBP1-203ENST00000463093 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
SSBP1-203ENST00000463093 CCNL1Q9UK58 526 aaPredicted RBP18.03■□□□□ 0.48
SSBP1-203ENST00000463093 PALLDQ8WX93 1383 aa18.03■□□□□ 0.48
SSBP1-203ENST00000463093 HMGB2P26583 209 aaKnown RBP18.02■□□□□ 0.48
SSBP1-203ENST00000463093 RTF1Q92541 710 aaKnown RBP18.02■□□□□ 0.48
SSBP1-203ENST00000463093 RUNDC1Q96C34 613 aa18.02■□□□□ 0.48
SSBP1-203ENST00000463093 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
SSBP1-203ENST00000463093 DOT1LQ8TEK3 1739 aa18.01■□□□□ 0.47
SSBP1-203ENST00000463093 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms