RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 POLD1P28340 1107 aa28.78■■■□□ 2.2
COMMD2-201ENST00000463077 ANKRD36BQ8N2N9 1353 aa28.76■■■□□ 2.2
COMMD2-201ENST00000463077 GOLGB1Q14789 3259 aaKnown RBP28.76■■■□□ 2.19
COMMD2-201ENST00000463077 HSPA5P11021 654 aaKnown RBP28.76■■■□□ 2.19
COMMD2-201ENST00000463077 PRIM1P49642 420 aaKnown RBP28.76■■■□□ 2.19
COMMD2-201ENST00000463077 FAM208AQ9UK61 1670 aaKnown RBP28.75■■■□□ 2.19
COMMD2-201ENST00000463077 TFCP2L1Q9NZI6 479 aa28.75■■■□□ 2.19
COMMD2-201ENST00000463077 KCNQ4P56696 695 aa28.74■■■□□ 2.19
COMMD2-201ENST00000463077 NSD2O96028 1365 aa28.74■■■□□ 2.19
COMMD2-201ENST00000463077 LTV1Q96GA3 475 aaPredicted RBP28.73■■■□□ 2.19
COMMD2-201ENST00000463077 LY75O60449 1722 aa28.72■■■□□ 2.19
COMMD2-201ENST00000463077 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
COMMD2-201ENST00000463077 TMF1P82094 1093 aa28.71■■■□□ 2.19
COMMD2-201ENST00000463077 MAP3K19Q56UN5 1328 aa28.7■■■□□ 2.19
COMMD2-201ENST00000463077 HOXC9P31274 260 aa28.7■■■□□ 2.18
COMMD2-201ENST00000463077 NLGN2Q8NFZ4 835 aa28.7■■■□□ 2.18
COMMD2-201ENST00000463077 ZCRB1Q8TBF4 217 aaKnown RBP28.7■■■□□ 2.18
COMMD2-201ENST00000463077 SYTL4Q96C24 671 aaPredicted RBP28.7■■■□□ 2.18
COMMD2-201ENST00000463077 KLHL34Q8N239 644 aa28.69■■■□□ 2.18
COMMD2-201ENST00000463077 GIGYF1O75420 1035 aaPredicted RBP28.66■■■□□ 2.18
COMMD2-201ENST00000463077 FBLN1P23142 703 aa28.66■■■□□ 2.18
COMMD2-201ENST00000463077 COG3Q96JB2 828 aa28.66■■■□□ 2.18
COMMD2-201ENST00000463077 DOT1LQ8TEK3 1739 aa28.66■■■□□ 2.18
COMMD2-201ENST00000463077 SHANK3Q9BYB0 1731 aa28.66■■■□□ 2.18
COMMD2-201ENST00000463077 COL23A1Q86Y22 540 aaPredicted RBP28.64■■■□□ 2.18
COMMD2-201ENST00000463077 PELP1Q8IZL8 1130 aaKnown RBP28.64■■■□□ 2.18
COMMD2-201ENST00000463077 CCNL1Q9UK58 526 aaPredicted RBP28.64■■■□□ 2.18
COMMD2-201ENST00000463077 MEGF6O75095 1541 aa28.64■■■□□ 2.17
COMMD2-201ENST00000463077 YBX3P16989 372 aaKnown RBP eCLIP28.63■■■□□ 2.17
COMMD2-201ENST00000463077 AMPHP49418 695 aa28.63■■■□□ 2.17
COMMD2-201ENST00000463077 CDCA8Q53HL2 280 aa28.63■■■□□ 2.17
COMMD2-201ENST00000463077 GRIN3BO60391 1043 aa28.62■■■□□ 2.17
COMMD2-201ENST00000463077 ZEB1P37275 1124 aaPredicted RBP28.62■■■□□ 2.17
COMMD2-201ENST00000463077 RGPD2P0DJD1 1756 aa28.62■■■□□ 2.17
COMMD2-201ENST00000463077 NBPF6Q5VWK0 638 aa28.6■■■□□ 2.17
COMMD2-201ENST00000463077 NBPF4Q96M43 638 aa28.6■■■□□ 2.17
COMMD2-201ENST00000463077 CGNL1Q0VF96 1302 aa28.6■■■□□ 2.17
COMMD2-201ENST00000463077 RTL1A6NKG5 1358 aa28.58■■■□□ 2.17
COMMD2-201ENST00000463077 CEP350Q5VT06 3117 aa28.57■■■□□ 2.16
COMMD2-201ENST00000463077 MSH5O43196 834 aa28.54■■■□□ 2.16
COMMD2-201ENST00000463077 FYB1O15117 783 aa28.53■■■□□ 2.16
COMMD2-201ENST00000463077 RRS1Q15050 365 aaKnown RBP28.53■■■□□ 2.16
COMMD2-201ENST00000463077 CD2APQ9Y5K6 639 aa28.53■■■□□ 2.16
COMMD2-201ENST00000463077 HMGB2P26583 209 aaKnown RBP28.52■■■□□ 2.16
COMMD2-201ENST00000463077 USHBP1Q8N6Y0 703 aa28.51■■■□□ 2.15
COMMD2-201ENST00000463077 FLAD1Q8NFF5 587 aa28.51■■■□□ 2.15
COMMD2-201ENST00000463077 RAPGEF4Q8WZA2 1011 aa28.51■■■□□ 2.15
COMMD2-201ENST00000463077 MSL1Q68DK7 614 aa28.5■■■□□ 2.15
COMMD2-201ENST00000463077 TATP17735 454 aaPredicted RBP28.48■■■□□ 2.15
COMMD2-201ENST00000463077 C5P01031 1676 aa28.48■■■□□ 2.15
COMMD2-201ENST00000463077 GGNBP2Q9H3C7 697 aa28.47■■■□□ 2.15
COMMD2-201ENST00000463077 INSRP06213 1382 aa28.47■■■□□ 2.15
COMMD2-201ENST00000463077 PCDH11XQ9BZA7 1347 aa28.46■■■□□ 2.15
COMMD2-201ENST00000463077 PCDH11YQ9BZA8 1340 aa28.46■■■□□ 2.15
COMMD2-201ENST00000463077 IFFO2Q5TF58 517 aa28.46■■■□□ 2.15
COMMD2-201ENST00000463077 PALLDQ8WX93 1383 aa28.46■■■□□ 2.15
COMMD2-201ENST00000463077 TAF1LQ8IZX4 1826 aa28.46■■■□□ 2.15
COMMD2-201ENST00000463077 ATP10DQ9P241 1426 aa28.45■■■□□ 2.15
COMMD2-201ENST00000463077 HSP90AB2PQ58FF8 381 aa28.45■■■□□ 2.14
COMMD2-201ENST00000463077 SMG6Q86US8 1419 aaKnown RBP28.44■■■□□ 2.14
COMMD2-201ENST00000463077 CYP27B1O15528 508 aa28.44■■■□□ 2.14
COMMD2-201ENST00000463077 KIF7Q2M1P5 1343 aa28.43■■■□□ 2.14
COMMD2-201ENST00000463077 KIF24Q5T7B8 1368 aa28.43■■■□□ 2.14
COMMD2-201ENST00000463077 ADCY9O60503 1353 aa28.42■■■□□ 2.14
COMMD2-201ENST00000463077 MPRIPQ6WCQ1 1025 aa28.42■■■□□ 2.14
COMMD2-201ENST00000463077 AMIGO3Q86WK7 504 aa28.41■■■□□ 2.14
COMMD2-201ENST00000463077 SMARCC1Q92922 1105 aaPredicted RBP28.4■■■□□ 2.14
COMMD2-201ENST00000463077 FLT4P35916 1363 aa28.39■■■□□ 2.14
COMMD2-201ENST00000463077 NKX1-1Q15270 411 aaPredicted RBP28.38■■■□□ 2.13
COMMD2-201ENST00000463077 POLR3GLQ9BT43 218 aa28.38■■■□□ 2.13
COMMD2-201ENST00000463077 C4BP0C0L5 1744 aa28.38■■■□□ 2.13
COMMD2-201ENST00000463077 CARD14Q9BXL6 1004 aa28.37■■■□□ 2.13
COMMD2-201ENST00000463077 GPBP1L1Q9HC44 474 aaPredicted RBP28.37■■■□□ 2.13
COMMD2-201ENST00000463077 PIGBQ92521 554 aa28.36■■■□□ 2.13
COMMD2-201ENST00000463077 WASHC2AQ641Q2 1341 aa28.36■■■□□ 2.13
COMMD2-201ENST00000463077 ITGB4P16144 1822 aa28.36■■■□□ 2.13
COMMD2-201ENST00000463077 TOGARAM1Q9Y4F4 1720 aa28.35■■■□□ 2.13
COMMD2-201ENST00000463077 AK7Q96M32 723 aa28.35■■■□□ 2.13
COMMD2-201ENST00000463077 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
COMMD2-201ENST00000463077 UBR3Q6ZT12 1888 aa28.34■■■□□ 2.13
COMMD2-201ENST00000463077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.33■■■□□ 2.13
COMMD2-201ENST00000463077 SMIM5Q71RC9 77 aa28.32■■■□□ 2.12
COMMD2-201ENST00000463077 IGSF1Q8N6C5 1336 aa28.32■■■□□ 2.12
COMMD2-201ENST00000463077 NSD3Q9BZ95 1437 aa28.32■■■□□ 2.12
COMMD2-201ENST00000463077 PKD1L3Q7Z443 1732 aa28.32■■■□□ 2.12
COMMD2-201ENST00000463077 MAP2P11137 1827 aaKnown RBP28.32■■■□□ 2.12
COMMD2-201ENST00000463077 HSPA6P17066 643 aa28.31■■■□□ 2.12
COMMD2-201ENST00000463077 SSFA2P28290 1259 aa28.31■■■□□ 2.12
COMMD2-201ENST00000463077 PANK3Q9H999 370 aa28.3■■■□□ 2.12
COMMD2-201ENST00000463077 LOC102724428A0A0B4J2F2 783 aa28.29■■■□□ 2.12
COMMD2-201ENST00000463077 SIK1P57059 783 aa28.29■■■□□ 2.12
COMMD2-201ENST00000463077 EMILIN1Q9Y6C2 1016 aa28.29■■■□□ 2.12
COMMD2-201ENST00000463077 KIF20BQ96Q89 1820 aa28.28■■■□□ 2.12
COMMD2-201ENST00000463077 PHF14O94880 888 aa28.28■■■□□ 2.12
COMMD2-201ENST00000463077 LINC00116Q8NCU8 138 aa28.28■■■□□ 2.12
COMMD2-201ENST00000463077 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.27■■■□□ 2.12
COMMD2-201ENST00000463077 SPG7Q9UQ90 795 aa28.27■■■□□ 2.12
COMMD2-201ENST00000463077 ZNF526Q8TF50 670 aaPredicted RBP28.25■■■□□ 2.11
COMMD2-201ENST00000463077 ITPK1Q13572 414 aa28.23■■■□□ 2.11
COMMD2-201ENST00000463077 ASAP1Q9ULH1 1129 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms