RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
COL6A1-202ENST00000463060 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
COL6A1-202ENST00000463060 RAPGEF4Q8WZA2 1011 aa18.94■□□□□ 0.62
COL6A1-202ENST00000463060 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
COL6A1-202ENST00000463060 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
COL6A1-202ENST00000463060 OVOS2A0A0G2JMS6 1433 aa18.93■□□□□ 0.62
COL6A1-202ENST00000463060 NEFMP07197 916 aa18.93■□□□□ 0.62
COL6A1-202ENST00000463060 IL2RBP14784 551 aa18.93■□□□□ 0.62
COL6A1-202ENST00000463060 AMOTQ4VCS5 1084 aa18.93■□□□□ 0.62
COL6A1-202ENST00000463060 PLEKHO1Q53GL0 409 aaPredicted RBP18.93■□□□□ 0.62
COL6A1-202ENST00000463060 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
COL6A1-202ENST00000463060 ATRNO75882 1429 aa18.92■□□□□ 0.62
COL6A1-202ENST00000463060 BARGINQ6ZT62 677 aa18.92■□□□□ 0.62
COL6A1-202ENST00000463060 GAS2L2Q8NHY3 880 aa18.92■□□□□ 0.62
COL6A1-202ENST00000463060 RIPK4P57078 832 aa18.91■□□□□ 0.62
COL6A1-202ENST00000463060 USP35Q9P2H5 1018 aa18.91■□□□□ 0.62
COL6A1-202ENST00000463060 PKD1L3Q7Z443 1732 aa18.91■□□□□ 0.62
COL6A1-202ENST00000463060 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
COL6A1-202ENST00000463060 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
COL6A1-202ENST00000463060 PARP4Q9UKK3 1724 aaKnown RBP18.89■□□□□ 0.61
COL6A1-202ENST00000463060 NEUROD2Q15784 382 aa18.89■□□□□ 0.61
COL6A1-202ENST00000463060 GJD4Q96KN9 370 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-202ENST00000463060 CDCA7Q9BWT1 371 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-202ENST00000463060 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-202ENST00000463060 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
COL6A1-202ENST00000463060 WNK3Q9BYP7 1800 aa18.88■□□□□ 0.61
COL6A1-202ENST00000463060 HTATSF1O43719 755 aaKnown RBP18.88■□□□□ 0.61
COL6A1-202ENST00000463060 ONECUT3O60422 494 aaPredicted RBP18.88■□□□□ 0.61
COL6A1-202ENST00000463060 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
COL6A1-202ENST00000463060 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
COL6A1-202ENST00000463060 CYP27B1O15528 508 aa18.87■□□□□ 0.61
COL6A1-202ENST00000463060 GLI3P10071 1580 aa18.87■□□□□ 0.61
COL6A1-202ENST00000463060 QTRT2Q9H974 415 aaKnown RBP18.87■□□□□ 0.61
COL6A1-202ENST00000463060 GNAT3A8MTJ3 354 aa18.86■□□□□ 0.61
COL6A1-202ENST00000463060 AKAP4Q5JQC9 854 aa18.86■□□□□ 0.61
COL6A1-202ENST00000463060 ZNF530Q6P9A1 599 aaPredicted RBP18.86■□□□□ 0.61
COL6A1-202ENST00000463060 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
COL6A1-202ENST00000463060 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
COL6A1-202ENST00000463060 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
COL6A1-202ENST00000463060 PHKG2P15735 406 aa18.85■□□□□ 0.61
COL6A1-202ENST00000463060 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
COL6A1-202ENST00000463060 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
COL6A1-202ENST00000463060 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
COL6A1-202ENST00000463060 ZNF772Q68DY9 489 aaPredicted RBP18.84■□□□□ 0.61
COL6A1-202ENST00000463060 IL17REQ8NFR9 667 aa18.84■□□□□ 0.61
COL6A1-202ENST00000463060 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.61
COL6A1-202ENST00000463060 ADAMTS7Q9UKP4 1686 aa18.83■□□□□ 0.61
COL6A1-202ENST00000463060 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.6
COL6A1-202ENST00000463060 FAM98CQ17RN3 349 aaKnown RBP18.83■□□□□ 0.6
COL6A1-202ENST00000463060 TRMT2AQ8IZ69 625 aaKnown RBP18.83■□□□□ 0.6
COL6A1-202ENST00000463060 IFNL2Q8IZJ0 200 aa18.83■□□□□ 0.6
COL6A1-202ENST00000463060 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
COL6A1-202ENST00000463060 EXOC5O00471 708 aa18.82■□□□□ 0.6
COL6A1-202ENST00000463060 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
COL6A1-202ENST00000463060 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
COL6A1-202ENST00000463060 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
COL6A1-202ENST00000463060 IL16Q14005 1332 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 PCDH11XQ9BZA7 1347 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 PCDH11YQ9BZA8 1340 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 C1orf141Q5JVX7 400 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 MCM10Q7L590 875 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 CDCA7LQ96GN5 454 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 LGR6Q9HBX8 967 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 TNS2Q63HR2 1409 aa18.81■□□□□ 0.6
COL6A1-202ENST00000463060 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
COL6A1-202ENST00000463060 GOLGA2Q08379 1002 aa18.8■□□□□ 0.6
COL6A1-202ENST00000463060 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
COL6A1-202ENST00000463060 LRRC37A3O60309 1634 aa18.79■□□□□ 0.6
COL6A1-202ENST00000463060 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
COL6A1-202ENST00000463060 SLFN5Q08AF3 891 aa18.79■□□□□ 0.6
COL6A1-202ENST00000463060 DDB1Q16531 1140 aa18.79■□□□□ 0.6
COL6A1-202ENST00000463060 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
COL6A1-202ENST00000463060 KDM6AO15550 1401 aaPredicted RBP18.79■□□□□ 0.6
COL6A1-202ENST00000463060 MPRIPQ6WCQ1 1025 aa18.78■□□□□ 0.6
COL6A1-202ENST00000463060 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
COL6A1-202ENST00000463060 DCAF5Q96JK2 942 aa18.78■□□□□ 0.6
COL6A1-202ENST00000463060 HSP90AB1P08238 724 aaKnown RBP18.77■□□□□ 0.6
COL6A1-202ENST00000463060 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.6
COL6A1-202ENST00000463060 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
COL6A1-202ENST00000463060 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
COL6A1-202ENST00000463060 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
COL6A1-202ENST00000463060 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
COL6A1-202ENST00000463060 VIRMAQ69YN4 1812 aaKnown RBP18.75■□□□□ 0.59
COL6A1-202ENST00000463060 E9PSI1 815 aa18.75■□□□□ 0.59
COL6A1-202ENST00000463060 CHL1O00533 1208 aa18.75■□□□□ 0.59
COL6A1-202ENST00000463060 DUSP27Q5VZP5 1158 aa18.75■□□□□ 0.59
COL6A1-202ENST00000463060 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
COL6A1-202ENST00000463060 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
COL6A1-202ENST00000463060 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
COL6A1-202ENST00000463060 ERVV-2B6SEH9 535 aa18.73■□□□□ 0.59
COL6A1-202ENST00000463060 GNAI1P63096 354 aa18.73■□□□□ 0.59
COL6A1-202ENST00000463060 TAF7Q15545 349 aaPredicted RBP18.73■□□□□ 0.59
COL6A1-202ENST00000463060 BABAM1Q9NWV8 329 aa18.73■□□□□ 0.59
COL6A1-202ENST00000463060 SIPA1L3O60292 1781 aaPredicted RBP18.73■□□□□ 0.59
COL6A1-202ENST00000463060 MRC1P22897 1456 aa18.72■□□□□ 0.59
COL6A1-202ENST00000463060 RXRBP28702 533 aa18.71■□□□□ 0.59
COL6A1-202ENST00000463060 SLC52A2Q9HAB3 445 aa18.71■□□□□ 0.59
COL6A1-202ENST00000463060 BCL9O00512 1426 aa18.7■□□□□ 0.58
COL6A1-202ENST00000463060 TEFQ10587 303 aa18.7■□□□□ 0.58
COL6A1-202ENST00000463060 MYH16Q9H6N6 1097 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms