RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
SMC3-202ENST00000462899 DOT1LQ8TEK3 1739 aa11.29□□□□□ -0.6
SMC3-202ENST00000462899 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMC3-202ENST00000462899 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
SMC3-202ENST00000462899 LRRC4BQ9NT99 713 aa11.28□□□□□ -0.6
SMC3-202ENST00000462899 CABP1Q9NZU7 370 aa11.28□□□□□ -0.6
SMC3-202ENST00000462899 FBXO3Q9UK99 471 aa11.28□□□□□ -0.6
SMC3-202ENST00000462899 ZBTB7CA1YPR0 619 aa11.27□□□□□ -0.61
SMC3-202ENST00000462899 EXOC5O00471 708 aa11.27□□□□□ -0.61
SMC3-202ENST00000462899 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.61
SMC3-202ENST00000462899 TTC21BQ7Z4L5 1316 aa11.27□□□□□ -0.61
SMC3-202ENST00000462899 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
SMC3-202ENST00000462899 KCNH5Q8NCM2 988 aa11.26□□□□□ -0.61
SMC3-202ENST00000462899 ERBB3P21860 1342 aa11.26□□□□□ -0.61
SMC3-202ENST00000462899 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
SMC3-202ENST00000462899 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
SMC3-202ENST00000462899 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
SMC3-202ENST00000462899 TTC21AQ8NDW8 1320 aa11.25□□□□□ -0.61
SMC3-202ENST00000462899 ADCY9O60503 1353 aa11.25□□□□□ -0.61
SMC3-202ENST00000462899 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
SMC3-202ENST00000462899 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
SMC3-202ENST00000462899 RGPD2P0DJD1 1756 aa11.24□□□□□ -0.61
SMC3-202ENST00000462899 NLGN2Q8NFZ4 835 aa11.24□□□□□ -0.61
SMC3-202ENST00000462899 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
SMC3-202ENST00000462899 NSD2O96028 1365 aa11.24□□□□□ -0.61
SMC3-202ENST00000462899 C5P01031 1676 aa11.24□□□□□ -0.61
SMC3-202ENST00000462899 GPR162Q16538 588 aa11.23□□□□□ -0.61
SMC3-202ENST00000462899 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
SMC3-202ENST00000462899 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
SMC3-202ENST00000462899 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.612e-10■■■□□ 17.8
SMC3-202ENST00000462899 TOGARAM1Q9Y4F4 1720 aa11.22□□□□□ -0.61
SMC3-202ENST00000462899 PCNTO95613 3336 aa11.22□□□□□ -0.61
SMC3-202ENST00000462899 ATP10DQ9P241 1426 aa11.21□□□□□ -0.61
SMC3-202ENST00000462899 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
SMC3-202ENST00000462899 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.61
SMC3-202ENST00000462899 MIER1Q8N108 512 aa11.21□□□□□ -0.61
SMC3-202ENST00000462899 SBNO2Q9Y2G9 1366 aa11.2□□□□□ -0.62
SMC3-202ENST00000462899 EVC2Q86UK5 1308 aa11.2□□□□□ -0.62
SMC3-202ENST00000462899 IL2RBP14784 551 aa11.2□□□□□ -0.62
SMC3-202ENST00000462899 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
SMC3-202ENST00000462899 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
SMC3-202ENST00000462899 SOX12O15370 315 aa11.19□□□□□ -0.62
SMC3-202ENST00000462899 POLD1P28340 1107 aa11.19□□□□□ -0.62
SMC3-202ENST00000462899 POTEHQ6S545 545 aa11.19□□□□□ -0.62
SMC3-202ENST00000462899 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
SMC3-202ENST00000462899 KTN1Q86UP2 1357 aaKnown RBP11.18□□□□□ -0.62
SMC3-202ENST00000462899 ANKRD36BQ8N2N9 1353 aa11.18□□□□□ -0.62
SMC3-202ENST00000462899 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
SMC3-202ENST00000462899 ITGB4P16144 1822 aa11.16□□□□□ -0.62
SMC3-202ENST00000462899 KIF13BQ9NQT8 1826 aa11.16□□□□□ -0.62
SMC3-202ENST00000462899 GRIN3BO60391 1043 aa11.16□□□□□ -0.62
SMC3-202ENST00000462899 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
SMC3-202ENST00000462899 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
SMC3-202ENST00000462899 MEGF6O75095 1541 aa11.15□□□□□ -0.62
SMC3-202ENST00000462899 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
SMC3-202ENST00000462899 HSPA6P17066 643 aa11.15□□□□□ -0.62
SMC3-202ENST00000462899 KCNQ4P56696 695 aa11.15□□□□□ -0.62
SMC3-202ENST00000462899 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
SMC3-202ENST00000462899 C4BP0C0L5 1744 aa11.15□□□□□ -0.63
SMC3-202ENST00000462899 NME9Q86XW9 330 aa11.14□□□□□ -0.63
SMC3-202ENST00000462899 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
SMC3-202ENST00000462899 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
SMC3-202ENST00000462899 EDC4Q6P2E9 1401 aaKnown RBP11.14□□□□□ -0.63
SMC3-202ENST00000462899 BRCA1P38398 1863 aaKnown RBP11.13□□□□□ -0.63
SMC3-202ENST00000462899 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
SMC3-202ENST00000462899 PKD1L3Q7Z443 1732 aa11.12□□□□□ -0.63
SMC3-202ENST00000462899 WDR90Q96KV7 1748 aa11.12□□□□□ -0.63
SMC3-202ENST00000462899 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
SMC3-202ENST00000462899 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
SMC3-202ENST00000462899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMC3-202ENST00000462899 IP6K1Q92551 441 aa11.1□□□□□ -0.63
SMC3-202ENST00000462899 L3MBTL2Q969R5 705 aa11.1□□□□□ -0.63
SMC3-202ENST00000462899 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
SMC3-202ENST00000462899 CCNL1Q9UK58 526 aaPredicted RBP11.1□□□□□ -0.63
SMC3-202ENST00000462899 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
SMC3-202ENST00000462899 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
SMC3-202ENST00000462899 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
SMC3-202ENST00000462899 KIF3CO14782 793 aa11.09□□□□□ -0.63
SMC3-202ENST00000462899 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
SMC3-202ENST00000462899 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
SMC3-202ENST00000462899 N4BP2Q86UW6 1770 aaPredicted RBP11.08□□□□□ -0.64
SMC3-202ENST00000462899 MSL1Q68DK7 614 aa11.08□□□□□ -0.64
SMC3-202ENST00000462899 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
SMC3-202ENST00000462899 USP47Q96K76 1375 aa11.07□□□□□ -0.64
SMC3-202ENST00000462899 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
SMC3-202ENST00000462899 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
SMC3-202ENST00000462899 SYTL4Q96C24 671 aaPredicted RBP11.07□□□□□ -0.64
SMC3-202ENST00000462899 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
SMC3-202ENST00000462899 HOXC9P31274 260 aa11.06□□□□□ -0.64
SMC3-202ENST00000462899 DNAJC5GQ8N7S2 189 aa11.06□□□□□ -0.64
SMC3-202ENST00000462899 ANKRD26Q9UPS8 1709 aa11.06□□□□□ -0.64
SMC3-202ENST00000462899 MAP3K19Q56UN5 1328 aa11.06□□□□□ -0.64
SMC3-202ENST00000462899 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
SMC3-202ENST00000462899 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
SMC3-202ENST00000462899 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
SMC3-202ENST00000462899 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
SMC3-202ENST00000462899 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
SMC3-202ENST00000462899 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
SMC3-202ENST00000462899 ZNF526Q8TF50 670 aaPredicted RBP11.04□□□□□ -0.64
SMC3-202ENST00000462899 SLC12A5Q9H2X9 1139 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms