RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 C20orf194Q5TEA3 1177 aa19.45■□□□□ 0.7
RPRD1B-203ENST00000462548 NLRP2Q9NX02 1062 aa19.44■□□□□ 0.7
RPRD1B-203ENST00000462548 PIP4K2BP78356 416 aa19.44■□□□□ 0.7
RPRD1B-203ENST00000462548 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
RPRD1B-203ENST00000462548 PHLPP1O60346 1717 aa19.43■□□□□ 0.7
RPRD1B-203ENST00000462548 MAP3K5Q99683 1374 aa19.43■□□□□ 0.7
RPRD1B-203ENST00000462548 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
RPRD1B-203ENST00000462548 TOM1O60784 492 aa19.43■□□□□ 0.7
RPRD1B-203ENST00000462548 LRRC37A3O60309 1634 aa19.43■□□□□ 0.7
RPRD1B-203ENST00000462548 CSB-PGBD3P0DP91 1061 aa19.42■□□□□ 0.7
RPRD1B-203ENST00000462548 EXOC6Q8TAG9 804 aa19.42■□□□□ 0.7
RPRD1B-203ENST00000462548 BCL2L13Q9BXK5 485 aa19.42■□□□□ 0.7
RPRD1B-203ENST00000462548 COL22A1Q8NFW1 1626 aaPredicted RBP19.42■□□□□ 0.7
RPRD1B-203ENST00000462548 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
RPRD1B-203ENST00000462548 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
RPRD1B-203ENST00000462548 IL17REQ8NFR9 667 aa19.41■□□□□ 0.7
RPRD1B-203ENST00000462548 CHL1O00533 1208 aa19.41■□□□□ 0.7
RPRD1B-203ENST00000462548 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
RPRD1B-203ENST00000462548 COL5A2P05997 1499 aaPredicted RBP19.4■□□□□ 0.7
RPRD1B-203ENST00000462548 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
RPRD1B-203ENST00000462548 TSPYL6Q8N831 410 aa19.4■□□□□ 0.7
RPRD1B-203ENST00000462548 MEGF6O75095 1541 aa19.39■□□□□ 0.7
RPRD1B-203ENST00000462548 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
RPRD1B-203ENST00000462548 PLEKHO1Q53GL0 409 aaPredicted RBP19.39■□□□□ 0.69
RPRD1B-203ENST00000462548 CRBNQ96SW2 442 aa19.39■□□□□ 0.69
RPRD1B-203ENST00000462548 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
RPRD1B-203ENST00000462548 MIS18AQ9NYP9 233 aa19.39■□□□□ 0.69
RPRD1B-203ENST00000462548 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
RPRD1B-203ENST00000462548 C8orf58Q8NAV2 365 aa19.38■□□□□ 0.69
RPRD1B-203ENST00000462548 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
RPRD1B-203ENST00000462548 VAMP4O75379 141 aa19.37■□□□□ 0.69
RPRD1B-203ENST00000462548 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
RPRD1B-203ENST00000462548 SSH1Q8WYL5 1049 aa19.37■□□□□ 0.69
RPRD1B-203ENST00000462548 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
RPRD1B-203ENST00000462548 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
RPRD1B-203ENST00000462548 LGR6Q9HBX8 967 aa19.36■□□□□ 0.69
RPRD1B-203ENST00000462548 TNNQ9UQP3 1299 aa19.36■□□□□ 0.69
RPRD1B-203ENST00000462548 AKAP4Q5JQC9 854 aa19.35■□□□□ 0.69
RPRD1B-203ENST00000462548 B4GALNT3Q6L9W6 998 aa19.35■□□□□ 0.69
RPRD1B-203ENST00000462548 RAPGEF4Q8WZA2 1011 aa19.35■□□□□ 0.69
RPRD1B-203ENST00000462548 CEMIPQ8WUJ3 1361 aa19.35■□□□□ 0.69
RPRD1B-203ENST00000462548 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
RPRD1B-203ENST00000462548 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
RPRD1B-203ENST00000462548 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
RPRD1B-203ENST00000462548 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
RPRD1B-203ENST00000462548 TATP17735 454 aaPredicted RBP19.33■□□□□ 0.69
RPRD1B-203ENST00000462548 TWISTNBQ3B726 338 aaPredicted RBP19.33■□□□□ 0.69
RPRD1B-203ENST00000462548 LARP1Q6PKG0 1096 aaKnown RBP19.33■□□□□ 0.69
RPRD1B-203ENST00000462548 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.69
RPRD1B-203ENST00000462548 TSPYL4Q9UJ04 414 aa19.33■□□□□ 0.68
RPRD1B-203ENST00000462548 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
RPRD1B-203ENST00000462548 COL14A1Q05707 1796 aaKnown RBP19.32■□□□□ 0.68
RPRD1B-203ENST00000462548 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
RPRD1B-203ENST00000462548 C1orf141Q5JVX7 400 aa19.31■□□□□ 0.68
RPRD1B-203ENST00000462548 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
RPRD1B-203ENST00000462548 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
RPRD1B-203ENST00000462548 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
RPRD1B-203ENST00000462548 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
RPRD1B-203ENST00000462548 PKD1L3Q7Z443 1732 aa19.31■□□□□ 0.68
RPRD1B-203ENST00000462548 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
RPRD1B-203ENST00000462548 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
RPRD1B-203ENST00000462548 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
RPRD1B-203ENST00000462548 CARD10Q9BWT7 1032 aa19.3■□□□□ 0.68
RPRD1B-203ENST00000462548 RLBP1P12271 317 aa19.3■□□□□ 0.68
RPRD1B-203ENST00000462548 EVA1CP58658 441 aa19.3■□□□□ 0.68
RPRD1B-203ENST00000462548 ADAMTS7Q9UKP4 1686 aa19.29■□□□□ 0.68
RPRD1B-203ENST00000462548 PDE3AQ14432 1141 aa19.29■□□□□ 0.68
RPRD1B-203ENST00000462548 OVOS2A0A0G2JMS6 1433 aa19.29■□□□□ 0.68
RPRD1B-203ENST00000462548 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
RPRD1B-203ENST00000462548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.688e-7■■■□□ 16.1
RPRD1B-203ENST00000462548 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
RPRD1B-203ENST00000462548 NOB1Q9ULX3 412 aaKnown RBP19.28■□□□□ 0.68
RPRD1B-203ENST00000462548 ADAMTS2O95450 1211 aa19.27■□□□□ 0.68
RPRD1B-203ENST00000462548 PHKG2P15735 406 aa19.27■□□□□ 0.68
RPRD1B-203ENST00000462548 SPG7Q9UQ90 795 aa19.27■□□□□ 0.68
RPRD1B-203ENST00000462548 CYP27B1O15528 508 aa19.27■□□□□ 0.68
RPRD1B-203ENST00000462548 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.68
RPRD1B-203ENST00000462548 PARP4Q9UKK3 1724 aaKnown RBP19.27■□□□□ 0.67
RPRD1B-203ENST00000462548 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.67
RPRD1B-203ENST00000462548 ZKSCAN2Q63HK3 967 aa19.26■□□□□ 0.67
RPRD1B-203ENST00000462548 CLUAP1Q96AJ1 413 aa19.26■□□□□ 0.67
RPRD1B-203ENST00000462548 COG6Q9Y2V7 657 aa19.26■□□□□ 0.67
RPRD1B-203ENST00000462548 KDM3BQ7LBC6 1761 aa19.26■□□□□ 0.67
RPRD1B-203ENST00000462548 PLCH1Q4KWH8 1693 aa19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 NUTM2BA6NNL0 878 aaPredicted RBP19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 NUTM2EB1AL46 878 aaPredicted RBP19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 NUTM2AQ8IVF1 878 aaPredicted RBP19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 CCDC136Q96JN2 1154 aa19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 BABAM1Q9NWV8 329 aa19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 SIPA1L3O60292 1781 aaPredicted RBP19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 TRIM27P14373 513 aa19.25■□□□□ 0.67
RPRD1B-203ENST00000462548 KCNQ3O43525 872 aa19.24■□□□□ 0.67
RPRD1B-203ENST00000462548 TEFQ10587 303 aa19.24■□□□□ 0.67
RPRD1B-203ENST00000462548 SCN11AQ9UI33 1791 aa19.24■□□□□ 0.67
RPRD1B-203ENST00000462548 IFNL2Q8IZJ0 200 aa19.24■□□□□ 0.67
RPRD1B-203ENST00000462548 USP35Q9P2H5 1018 aa19.24■□□□□ 0.67
RPRD1B-203ENST00000462548 IL2RBP14784 551 aa19.23■□□□□ 0.67
RPRD1B-203ENST00000462548 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
RPRD1B-203ENST00000462548 ATF7IPQ6VMQ6 1270 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms