RNA–Protein interactions for RNA: ENST00000462420.2

SMO-202, Transcript of smoothened, frizzled class receptor, humanhuman

TSL 4

Gene SMO, Length 787 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-202ENST00000462420 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
SMO-202ENST00000462420 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
SMO-202ENST00000462420 AMPHP49418 695 aa16.79■□□□□ 0.28
SMO-202ENST00000462420 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
SMO-202ENST00000462420 KCNQ4P56696 695 aa16.79■□□□□ 0.28
SMO-202ENST00000462420 SLC27A3Q5K4L6 730 aa16.79■□□□□ 0.28
SMO-202ENST00000462420 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
SMO-202ENST00000462420 MEGF6O75095 1541 aa16.79■□□□□ 0.28
SMO-202ENST00000462420 NSD2O96028 1365 aa16.78■□□□□ 0.28
SMO-202ENST00000462420 ANKRD36BQ8N2N9 1353 aa16.78■□□□□ 0.28
SMO-202ENST00000462420 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
SMO-202ENST00000462420 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.28
SMO-202ENST00000462420 QSER1Q2KHR3 1735 aa16.77■□□□□ 0.28
SMO-202ENST00000462420 GRIN3BO60391 1043 aa16.77■□□□□ 0.28
SMO-202ENST00000462420 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
SMO-202ENST00000462420 GOLGB1Q14789 3259 aaKnown RBP16.77■□□□□ 0.27
SMO-202ENST00000462420 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
SMO-202ENST00000462420 TFCP2L1Q9NZI6 479 aa16.76■□□□□ 0.27
SMO-202ENST00000462420 LY75O60449 1722 aa16.76■□□□□ 0.27
SMO-202ENST00000462420 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
SMO-202ENST00000462420 TUBGCP6Q96RT7 1819 aa16.75■□□□□ 0.27
SMO-202ENST00000462420 HSPA6P17066 643 aa16.75■□□□□ 0.27
SMO-202ENST00000462420 NBPF6Q5VWK0 638 aa16.75■□□□□ 0.27
SMO-202ENST00000462420 NBPF4Q96M43 638 aa16.75■□□□□ 0.27
SMO-202ENST00000462420 GPBP1L1Q9HC44 474 aaPredicted RBP16.75■□□□□ 0.27
SMO-202ENST00000462420 COL24A1Q17RW2 1714 aa16.74■□□□□ 0.27
SMO-202ENST00000462420 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
SMO-202ENST00000462420 FYB1O15117 783 aa16.74■□□□□ 0.27
SMO-202ENST00000462420 SLC24A1O60721 1099 aa16.74■□□□□ 0.27
SMO-202ENST00000462420 USHBP1Q8N6Y0 703 aa16.74■□□□□ 0.27
SMO-202ENST00000462420 ZNF526Q8TF50 670 aaPredicted RBP16.74■□□□□ 0.27
SMO-202ENST00000462420 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
SMO-202ENST00000462420 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
SMO-202ENST00000462420 CEP350Q5VT06 3117 aa16.71■□□□□ 0.27
SMO-202ENST00000462420 TMF1P82094 1093 aa16.71■□□□□ 0.27
SMO-202ENST00000462420 CCNL1Q9UK58 526 aaPredicted RBP16.71■□□□□ 0.27
SMO-202ENST00000462420 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
SMO-202ENST00000462420 USP47Q96K76 1375 aa16.7■□□□□ 0.26
SMO-202ENST00000462420 MSH5O43196 834 aa16.7■□□□□ 0.26
SMO-202ENST00000462420 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
SMO-202ENST00000462420 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
SMO-202ENST00000462420 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
SMO-202ENST00000462420 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
SMO-202ENST00000462420 KIF20BQ96Q89 1820 aa16.68■□□□□ 0.26
SMO-202ENST00000462420 INSRP06213 1382 aa16.67■□□□□ 0.26
SMO-202ENST00000462420 TATP17735 454 aaPredicted RBP16.67■□□□□ 0.26
SMO-202ENST00000462420 COL23A1Q86Y22 540 aaPredicted RBP16.67■□□□□ 0.26
SMO-202ENST00000462420 FLT4P35916 1363 aa16.66■□□□□ 0.26
SMO-202ENST00000462420 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
SMO-202ENST00000462420 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
SMO-202ENST00000462420 C5P01031 1676 aa16.65■□□□□ 0.26
SMO-202ENST00000462420 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
SMO-202ENST00000462420 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
SMO-202ENST00000462420 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
SMO-202ENST00000462420 TOGARAM1Q9Y4F4 1720 aa16.63■□□□□ 0.25
SMO-202ENST00000462420 CYP27B1O15528 508 aa16.63■□□□□ 0.25
SMO-202ENST00000462420 CARD14Q9BXL6 1004 aa16.63■□□□□ 0.25
SMO-202ENST00000462420 PALLDQ8WX93 1383 aa16.63■□□□□ 0.25
SMO-202ENST00000462420 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
SMO-202ENST00000462420 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
SMO-202ENST00000462420 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
SMO-202ENST00000462420 KIF3CO14782 793 aa16.61■□□□□ 0.25
SMO-202ENST00000462420 CD2APQ9Y5K6 639 aa16.61■□□□□ 0.25
SMO-202ENST00000462420 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
SMO-202ENST00000462420 ADCY9O60503 1353 aa16.6■□□□□ 0.25
SMO-202ENST00000462420 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
SMO-202ENST00000462420 TAF1LQ8IZX4 1826 aa16.59■□□□□ 0.25
SMO-202ENST00000462420 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
SMO-202ENST00000462420 PPM1GO15355 546 aaPredicted RBP16.58■□□□□ 0.24
SMO-202ENST00000462420 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
SMO-202ENST00000462420 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
SMO-202ENST00000462420 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.24
SMO-202ENST00000462420 ITGB4P16144 1822 aa16.57■□□□□ 0.24
SMO-202ENST00000462420 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
SMO-202ENST00000462420 APLP1P51693 650 aa16.56■□□□□ 0.24
SMO-202ENST00000462420 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
SMO-202ENST00000462420 PIGBQ92521 554 aa16.56■□□□□ 0.24
SMO-202ENST00000462420 SMARCC1Q92922 1105 aaPredicted RBP16.56■□□□□ 0.24
SMO-202ENST00000462420 AK7Q96M32 723 aa16.56■□□□□ 0.24
SMO-202ENST00000462420 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
SMO-202ENST00000462420 CAPN15O75808 1086 aa16.55■□□□□ 0.24
SMO-202ENST00000462420 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
SMO-202ENST00000462420 NKX1-1Q15270 411 aaPredicted RBP16.55■□□□□ 0.24
SMO-202ENST00000462420 PHF14O94880 888 aa16.54■□□□□ 0.24
SMO-202ENST00000462420 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
SMO-202ENST00000462420 EYA1Q99502 592 aa16.54■□□□□ 0.24
SMO-202ENST00000462420 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
SMO-202ENST00000462420 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
SMO-202ENST00000462420 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
SMO-202ENST00000462420 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.24
SMO-202ENST00000462420 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.24
SMO-202ENST00000462420 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
SMO-202ENST00000462420 COL13A1Q5TAT6 717 aaPredicted RBP16.52■□□□□ 0.24
SMO-202ENST00000462420 POLKQ9UBT6 870 aa16.52■□□□□ 0.24
SMO-202ENST00000462420 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
SMO-202ENST00000462420 SIK1P57059 783 aa16.51■□□□□ 0.23
SMO-202ENST00000462420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMO-202ENST00000462420 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
SMO-202ENST00000462420 TOMM70O94826 608 aa16.5■□□□□ 0.23
SMO-202ENST00000462420 PHKG2P15735 406 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms