RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 MTHFSP49914 203 aa18.13■□□□□ 0.49
LRRC47-202ENST00000462356 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
LRRC47-202ENST00000462356 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
LRRC47-202ENST00000462356 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
LRRC47-202ENST00000462356 BCL9O00512 1426 aa18.1■□□□□ 0.49
LRRC47-202ENST00000462356 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
LRRC47-202ENST00000462356 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
LRRC47-202ENST00000462356 NCAPD2Q15021 1401 aa18.08■□□□□ 0.49
LRRC47-202ENST00000462356 NPC1L1Q9UHC9 1359 aa18.08■□□□□ 0.49
LRRC47-202ENST00000462356 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
LRRC47-202ENST00000462356 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
LRRC47-202ENST00000462356 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
LRRC47-202ENST00000462356 IGSF1Q8N6C5 1336 aa18.07■□□□□ 0.48
LRRC47-202ENST00000462356 CYP27B1O15528 508 aa18.07■□□□□ 0.48
LRRC47-202ENST00000462356 IL13P35225 146 aa18.07■□□□□ 0.48
LRRC47-202ENST00000462356 PRIM1P49642 420 aaKnown RBP18.07■□□□□ 0.48
LRRC47-202ENST00000462356 NHSQ6T4R5 1651 aa18.06■□□□□ 0.48
LRRC47-202ENST00000462356 PCDH11XQ9BZA7 1347 aa18.05■□□□□ 0.48
LRRC47-202ENST00000462356 PCDH11YQ9BZA8 1340 aa18.05■□□□□ 0.48
LRRC47-202ENST00000462356 PLSCR1O15162 318 aa18.05■□□□□ 0.48
LRRC47-202ENST00000462356 SULT6B1Q6IMI4 303 aa18.05■□□□□ 0.48
LRRC47-202ENST00000462356 PROM2Q8N271 834 aa18.05■□□□□ 0.48
LRRC47-202ENST00000462356 DOT1LQ8TEK3 1739 aa18.05■□□□□ 0.48
LRRC47-202ENST00000462356 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
LRRC47-202ENST00000462356 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
LRRC47-202ENST00000462356 RREB1Q92766 1687 aa18.03■□□□□ 0.48
LRRC47-202ENST00000462356 BTAF1O14981 1849 aa18.03■□□□□ 0.48
LRRC47-202ENST00000462356 DIAPH1O60610 1272 aaKnown RBP18.03■□□□□ 0.48
LRRC47-202ENST00000462356 HMOX1P09601 288 aa18.03■□□□□ 0.48
LRRC47-202ENST00000462356 NUP188Q5SRE5 1749 aa18.03■□□□□ 0.48
LRRC47-202ENST00000462356 PKD1L3Q7Z443 1732 aa18.03■□□□□ 0.48
LRRC47-202ENST00000462356 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
LRRC47-202ENST00000462356 TXNRD1Q16881 649 aa18.02■□□□□ 0.48
LRRC47-202ENST00000462356 PARD3Q8TEW0 1356 aa18.02■□□□□ 0.47
LRRC47-202ENST00000462356 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
LRRC47-202ENST00000462356 KCNQ4P56696 695 aa18■□□□□ 0.47
LRRC47-202ENST00000462356 PHKG2P15735 406 aa17.99■□□□□ 0.47
LRRC47-202ENST00000462356 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
LRRC47-202ENST00000462356 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
LRRC47-202ENST00000462356 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
LRRC47-202ENST00000462356 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
LRRC47-202ENST00000462356 ANO8Q9HCE9 1232 aaPredicted RBP17.98■□□□□ 0.47
LRRC47-202ENST00000462356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.473e-6■■□□□ 13.5
LRRC47-202ENST00000462356 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
LRRC47-202ENST00000462356 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
LRRC47-202ENST00000462356 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
LRRC47-202ENST00000462356 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
LRRC47-202ENST00000462356 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
LRRC47-202ENST00000462356 NKX1-1Q15270 411 aaPredicted RBP17.96■□□□□ 0.47
LRRC47-202ENST00000462356 KDRP35968 1356 aa17.95■□□□□ 0.46
LRRC47-202ENST00000462356 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
LRRC47-202ENST00000462356 LRRC4BQ9NT99 713 aa17.95■□□□□ 0.46
LRRC47-202ENST00000462356 ITGB4P16144 1822 aa17.94■□□□□ 0.46
LRRC47-202ENST00000462356 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
LRRC47-202ENST00000462356 PIGBQ92521 554 aa17.93■□□□□ 0.46
LRRC47-202ENST00000462356 C1orf141Q5JVX7 400 aa17.92■□□□□ 0.46
LRRC47-202ENST00000462356 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
LRRC47-202ENST00000462356 STK32BQ9NY57 414 aa17.91■□□□□ 0.46
LRRC47-202ENST00000462356 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
LRRC47-202ENST00000462356 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
LRRC47-202ENST00000462356 CCNL1Q9UK58 526 aaPredicted RBP17.9■□□□□ 0.46
LRRC47-202ENST00000462356 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
LRRC47-202ENST00000462356 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
LRRC47-202ENST00000462356 SLC15A2Q16348 729 aa17.89■□□□□ 0.45
LRRC47-202ENST00000462356 ZNF827Q17R98 1081 aa17.89■□□□□ 0.45
LRRC47-202ENST00000462356 DCAF5Q96JK2 942 aa17.89■□□□□ 0.45
LRRC47-202ENST00000462356 ASAP1Q9ULH1 1129 aa17.89■□□□□ 0.45
LRRC47-202ENST00000462356 LY75O60449 1722 aa17.89■□□□□ 0.45
LRRC47-202ENST00000462356 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.45
LRRC47-202ENST00000462356 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
LRRC47-202ENST00000462356 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
LRRC47-202ENST00000462356 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
LRRC47-202ENST00000462356 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
LRRC47-202ENST00000462356 HSP90AB1P08238 724 aaKnown RBP17.87■□□□□ 0.45
LRRC47-202ENST00000462356 PRKAR2BP31323 418 aa17.87■□□□□ 0.45
LRRC47-202ENST00000462356 CABP4P57796 275 aa17.87■□□□□ 0.45
LRRC47-202ENST00000462356 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
LRRC47-202ENST00000462356 RALBP1Q15311 655 aa17.86■□□□□ 0.45
LRRC47-202ENST00000462356 AKAP4Q5JQC9 854 aa17.86■□□□□ 0.45
LRRC47-202ENST00000462356 SLC27A3Q5K4L6 730 aa17.86■□□□□ 0.45
LRRC47-202ENST00000462356 PHACTR3Q96KR7 559 aa17.86■□□□□ 0.45
LRRC47-202ENST00000462356 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
LRRC47-202ENST00000462356 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
LRRC47-202ENST00000462356 PAPPAQ13219 1627 aa17.85■□□□□ 0.45
LRRC47-202ENST00000462356 NFATC2IPQ8NCF5 419 aa17.85■□□□□ 0.45
LRRC47-202ENST00000462356 ATG3Q9NT62 314 aa17.85■□□□□ 0.45
LRRC47-202ENST00000462356 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
LRRC47-202ENST00000462356 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
LRRC47-202ENST00000462356 RNMTO43148 476 aaKnown RBP17.83■□□□□ 0.44
LRRC47-202ENST00000462356 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
LRRC47-202ENST00000462356 SCN11AQ9UI33 1791 aa17.82■□□□□ 0.44
LRRC47-202ENST00000462356 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
LRRC47-202ENST00000462356 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
LRRC47-202ENST00000462356 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
LRRC47-202ENST00000462356 LOC102724428A0A0B4J2F2 783 aa17.81■□□□□ 0.44
LRRC47-202ENST00000462356 SIK1P57059 783 aa17.81■□□□□ 0.44
LRRC47-202ENST00000462356 SMIM5Q71RC9 77 aa17.81■□□□□ 0.44
LRRC47-202ENST00000462356 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
LRRC47-202ENST00000462356 MYBBP1AQ9BQG0 1328 aaKnown RBP17.8■□□□□ 0.44
LRRC47-202ENST00000462356 ATP6V1AP38606 617 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms