RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 WDR43Q15061 677 aaKnown RBP eCLIP17.51■□□□□ 0.39
PHGDH-203ENST00000462324 AMOTQ4VCS5 1084 aa17.51■□□□□ 0.39
PHGDH-203ENST00000462324 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
PHGDH-203ENST00000462324 NEFMP07197 916 aa17.5■□□□□ 0.39
PHGDH-203ENST00000462324 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
PHGDH-203ENST00000462324 OVOS2A0A0G2JMS6 1433 aa17.49■□□□□ 0.39
PHGDH-203ENST00000462324 MRS2Q9HD23 443 aa17.49■□□□□ 0.39
PHGDH-203ENST00000462324 THSD7AQ9UPZ6 1657 aa17.48■□□□□ 0.39
PHGDH-203ENST00000462324 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
PHGDH-203ENST00000462324 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
PHGDH-203ENST00000462324 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
PHGDH-203ENST00000462324 MEGF6O75095 1541 aa17.47■□□□□ 0.39
PHGDH-203ENST00000462324 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
PHGDH-203ENST00000462324 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
PHGDH-203ENST00000462324 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
PHGDH-203ENST00000462324 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
PHGDH-203ENST00000462324 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
PHGDH-203ENST00000462324 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
PHGDH-203ENST00000462324 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
PHGDH-203ENST00000462324 MARCH10Q8NA82 808 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-203ENST00000462324 PARP4Q9UKK3 1724 aaKnown RBP17.44■□□□□ 0.38
PHGDH-203ENST00000462324 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
PHGDH-203ENST00000462324 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
PHGDH-203ENST00000462324 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
PHGDH-203ENST00000462324 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
PHGDH-203ENST00000462324 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
PHGDH-203ENST00000462324 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
PHGDH-203ENST00000462324 PNISRQ8TF01 805 aaKnown RBP17.43■□□□□ 0.38
PHGDH-203ENST00000462324 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-203ENST00000462324 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.38
PHGDH-203ENST00000462324 BCL9O00512 1426 aa17.41■□□□□ 0.38
PHGDH-203ENST00000462324 CYP27B1O15528 508 aa17.41■□□□□ 0.38
PHGDH-203ENST00000462324 PHKG2P15735 406 aa17.41■□□□□ 0.38
PHGDH-203ENST00000462324 NKX1-1Q15270 411 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-203ENST00000462324 MIER1Q8N108 512 aa17.41■□□□□ 0.38
PHGDH-203ENST00000462324 MAPK8IP3Q9UPT6 1336 aa17.41■□□□□ 0.38
PHGDH-203ENST00000462324 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
PHGDH-203ENST00000462324 AKAP4Q5JQC9 854 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 RUNDC1Q96C34 613 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
PHGDH-203ENST00000462324 PHACTR3Q96KR7 559 aa17.39■□□□□ 0.37
PHGDH-203ENST00000462324 DCAF5Q96JK2 942 aa17.38■□□□□ 0.37
PHGDH-203ENST00000462324 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
PHGDH-203ENST00000462324 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
PHGDH-203ENST00000462324 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
PHGDH-203ENST00000462324 ERVV-2B6SEH9 535 aa17.35■□□□□ 0.37
PHGDH-203ENST00000462324 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
PHGDH-203ENST00000462324 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-203ENST00000462324 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
PHGDH-203ENST00000462324 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
PHGDH-203ENST00000462324 TRIM37O94972 964 aa17.34■□□□□ 0.37
PHGDH-203ENST00000462324 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
PHGDH-203ENST00000462324 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
PHGDH-203ENST00000462324 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
PHGDH-203ENST00000462324 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
PHGDH-203ENST00000462324 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
PHGDH-203ENST00000462324 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
PHGDH-203ENST00000462324 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
PHGDH-203ENST00000462324 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
PHGDH-203ENST00000462324 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
PHGDH-203ENST00000462324 SYTL4Q96C24 671 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-203ENST00000462324 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
PHGDH-203ENST00000462324 RIPK4P57078 832 aa17.31■□□□□ 0.36
PHGDH-203ENST00000462324 CABP4P57796 275 aa17.31■□□□□ 0.36
PHGDH-203ENST00000462324 KCNQ2O43526 872 aa17.3■□□□□ 0.36
PHGDH-203ENST00000462324 TMOD3Q9NYL9 352 aa17.3■□□□□ 0.36
PHGDH-203ENST00000462324 APBA3O96018 575 aa17.29■□□□□ 0.36
PHGDH-203ENST00000462324 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
PHGDH-203ENST00000462324 APAF1O14727 1248 aa17.28■□□□□ 0.36
PHGDH-203ENST00000462324 BAG6P46379 1132 aa17.28■□□□□ 0.36
PHGDH-203ENST00000462324 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
PHGDH-203ENST00000462324 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
PHGDH-203ENST00000462324 SHANK3Q9BYB0 1731 aa17.27■□□□□ 0.36
PHGDH-203ENST00000462324 TEFQ10587 303 aa17.27■□□□□ 0.36
PHGDH-203ENST00000462324 NEUROD2Q15784 382 aa17.27■□□□□ 0.36
PHGDH-203ENST00000462324 NGEFQ8N5V2 710 aa17.27■□□□□ 0.36
PHGDH-203ENST00000462324 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
PHGDH-203ENST00000462324 SLC52A2Q9HAB3 445 aa17.27■□□□□ 0.36
PHGDH-203ENST00000462324 PLSCR1O15162 318 aa17.26■□□□□ 0.35
PHGDH-203ENST00000462324 PIGBQ92521 554 aa17.26■□□□□ 0.35
PHGDH-203ENST00000462324 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-203ENST00000462324 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-203ENST00000462324 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
PHGDH-203ENST00000462324 MCM10Q7L590 875 aa17.25■□□□□ 0.35
PHGDH-203ENST00000462324 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
PHGDH-203ENST00000462324 CEMIPQ8WUJ3 1361 aa17.25■□□□□ 0.35
PHGDH-203ENST00000462324 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
PHGDH-203ENST00000462324 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
PHGDH-203ENST00000462324 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
PHGDH-203ENST00000462324 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-203ENST00000462324 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
PHGDH-203ENST00000462324 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
PHGDH-203ENST00000462324 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
PHGDH-203ENST00000462324 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
PHGDH-203ENST00000462324 CAMKK2Q96RR4 588 aa17.2■□□□□ 0.34
PHGDH-203ENST00000462324 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms